Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 6.3e-146 520.8 266 100.0
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.6e-104 383.3 262 74.8
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 2.3e-87 326.2 268 67.5
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 6.8e-84 314.7 262 64.5
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 2.1e-80 303.1 259 60.6
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 1.9e-78 296.6 262 62.6
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 1.1e-76 290.8 270 60.0
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 1.1e-76 290.8 275 60.4
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 6.4e-74 281.6 263 58.2
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 8.4e-74 281.2 265 58.5
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 7.1e-73 278.1 277 58.1
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 1.2e-72 277.3 302 52.3
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 7.8e-72 274.6 261 57.5
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 6.2e-69 265.0 259 54.1
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 8.1e-69 264.6 264 55.7
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.8e-67 258.5 264 54.5
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 7.6e-67 258.1 267 53.6
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 7.6e-67 258.1 265 53.6
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 9.9e-67 257.7 267 53.6
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 3.8e-66 255.8 267 54.3
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 4.9e-66 255.4 267 54.3
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 6.0e-64 248.4 256 53.1
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 7.8e-64 248.1 259 52.1
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 1.3e-63 247.3 261 51.7
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 1.3e-63 247.3 272 52.2
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 2.3e-63 246.5 254 54.3
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 3.0e-63 246.1 258 51.9
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 1.1e-62 244.2 254 53.1
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 1.5e-62 243.8 254 53.5
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 5.6e-62 241.9 266 51.5
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 5.6e-62 241.9 181 65.7
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 2.8e-61 239.6 259 50.2
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 1.4e-60 237.3 259 50.6
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 2.4e-60 236.5 266 51.5
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 5.3e-60 235.3 371 41.2
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 1.2e-59 234.2 257 50.2
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 5.8e-59 231.9 268 50.0
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 5.8e-59 231.9 268 49.6
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 9.9e-59 231.1 257 50.2
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 1.7e-58 230.3 257 50.6
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 2.2e-58 229.9 260 48.1
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 2.9e-58 229.6 257 49.4
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 2.9e-58 229.6 254 50.0
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 1.1e-57 227.6 261 49.0
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 1.4e-57 227.3 262 50.0
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 4.2e-57 225.7 260 48.1
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 9.3e-57 224.6 259 49.4
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 1.2e-56 224.2 257 49.8
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 8.7e-55 218.0 274 47.8
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.9e-54 216.9 260 48.1
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 5.6e-54 215.3 274 46.7
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 5.6e-54 215.3 274 46.7
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 7.4e-54 214.9 261 47.1
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 2.8e-53 213.0 256 48.0
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 2.4e-52 209.9 243 49.8
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 9.0e-52 208.0 259 46.3
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 1.3e-50 204.1 274 46.7
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 2.4e-49 199.9 315 40.3
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 9.3e-49 198.0 276 44.9
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 1.5e-46 190.7 258 43.8
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 4.3e-46 189.1 216 50.5
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 5.6e-46 188.7 258 43.8
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 9.6e-46 188.0 220 49.5
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 1.3e-45 187.6 261 43.3
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 1.6e-45 187.2 259 42.5
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 1.6e-45 187.2 274 42.0
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 1.6e-45 187.2 154 60.4
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 2.1e-45 186.8 260 43.1
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 4.8e-45 185.7 258 42.6
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 5.3e-44 182.2 171 53.8
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 6.9e-44 181.8 259 40.9
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 9.0e-44 181.4 259 43.2
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 1.5e-43 180.6 258 41.9
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 2.6e-43 179.9 258 42.2
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 1.3e-42 177.6 258 41.5
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.3e-42 177.6 176 52.8
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 1.9e-41 173.7 258 40.3
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 4.2e-41 172.6 258 39.9
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 4.2e-41 172.6 258 39.9
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 4.2e-41 172.6 258 42.6
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 1.6e-40 170.6 259 42.5
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 3.0e-39 166.4 154 53.2
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 4.3e-38 162.5 240 40.8
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 2.8e-37 159.8 272 37.9
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 3.7e-37 159.5 196 45.9
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 8.2e-37 158.3 247 39.7
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.4e-36 157.5 268 35.8
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 1.7e-34 150.6 278 39.6
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 6.5e-34 148.7 281 35.2
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 7.2e-33 145.2 245 36.3
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 1.6e-32 144.1 232 40.1
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 6.1e-32 142.1 100 65.0
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 1.1e-30 137.9 174 44.3
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 2.8e-29 133.3 247 35.6
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 3.1e-28 129.8 256 34.0
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 4.1e-28 129.4 257 35.8
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 5.9e-27 125.6 179 44.1
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 1.3e-26 124.4 277 30.7
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 1.2e-24 117.9 260 34.6
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 2.7e-24 116.7 115 53.0
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 3.9e-23 112.8 166 44.0
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 3.7e-21 106.3 166 41.6
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 1.8e-20 104.0 90 56.7
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 6.9e-20 102.1 102 47.1
GSVIVG01022344001 Vitis vinifera HOM05D007225 ORTHO05D009062 8.8e-15 85.1 106 54.7
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 3.1e-12 76.6 99 39.4
Peaxi162Scf00172g00068 Petunia axillaris HOM05D007225 ORTHO05D009062 3.5e-11 73.2 88 52.3
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 4.2e-09 66.2 123 36.6
CBR_g23098 Chara braunii HOM05D007225 ORTHO05D009062 7.2e-09 65.5 334 22.5
SMO143G0295 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 9.4e-09 65.1 169 29.6
SHI11459 Sapria himalayana HOM05D038817 ORTHO05D009062 4.4e-06 56.2 47 57.4


User provided reference genes

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