Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 7.0e-201 703.7 359 100.0
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 7.4e-166 587.4 360 83.9
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 9.7e-150 533.9 357 74.2
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 2.6e-147 525.8 365 72.6
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 2.6e-134 482.6 365 68.8
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 5.3e-132 474.9 377 66.8
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 5.3e-132 474.9 370 65.7
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 7.0e-132 474.6 359 67.4
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 9.1e-132 474.2 377 67.1
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 1.1e-129 467.2 374 64.7
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 1.4e-129 466.8 371 65.2
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 1.8e-127 459.9 378 63.0
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 6.7e-127 458.0 360 66.4
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 9.7e-126 454.1 298 76.5
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 1.7e-125 453.4 370 65.7
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 1.4e-124 450.3 370 61.9
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 9.1e-124 447.6 369 62.1
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 5.9e-123 444.9 370 61.9
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 7.7e-123 444.5 366 62.8
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 7.7e-123 444.5 370 61.9
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 1.7e-122 443.4 332 68.7
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 5.0e-122 441.8 356 62.6
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 6.5e-122 441.4 363 63.6
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 1.9e-121 439.9 370 62.4
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 3.2e-121 439.1 319 69.3
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 5.5e-121 438.3 362 62.7
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 7.2e-121 438.0 365 64.4
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 1.5e-118 430.3 363 63.9
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 2.8e-117 426.0 304 71.1
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 2.8e-117 426.0 356 62.6
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 4.8e-117 425.2 372 61.6
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 6.3e-117 424.9 329 65.0
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 1.1e-116 424.1 348 65.2
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 1.4e-116 423.7 374 58.3
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 1.8e-116 423.3 371 60.6
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 4.1e-116 422.2 326 64.1
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 4.1e-116 422.2 286 71.7
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 7.0e-116 421.4 350 61.7
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 3.5e-115 419.1 360 62.2
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 2.2e-114 416.4 362 61.6
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 2.9e-114 416.0 369 57.5
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 2.9e-114 416.0 360 61.9
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 8.5e-114 414.5 366 57.9
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.5e-113 413.7 369 58.5
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 3.2e-113 412.5 315 64.8
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 4.2e-113 412.1 362 59.9
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 9.4e-113 411.0 359 57.7
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 9.4e-113 411.0 294 68.0
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 2.7e-112 409.5 403 55.1
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 3.6e-112 409.1 289 69.2
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 4.7e-112 408.7 367 58.6
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 1.0e-111 407.5 323 62.2
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 1.4e-111 407.1 370 57.0
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 5.2e-111 405.2 289 69.2
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 8.8e-111 404.4 367 57.2
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 1.5e-110 403.7 329 60.8
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 1.5e-110 403.7 367 58.0
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 2.6e-110 402.9 354 58.2
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 4.4e-110 402.1 353 58.1
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 4.4e-110 402.1 353 58.1
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 4.4e-110 402.1 364 57.4
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 5.7e-110 401.7 367 56.9
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 1.7e-109 400.2 309 64.4
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.1e-108 397.5 361 58.2
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 1.4e-108 397.1 376 56.4
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 5.4e-108 395.2 363 57.0
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 9.1e-108 394.4 351 59.0
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 9.1e-108 394.4 356 58.1
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 2.3e-106 389.8 374 56.7
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 1.5e-105 387.1 379 55.1
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 5.5e-105 385.2 358 58.1
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 9.5e-105 384.4 362 58.8
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 2.8e-104 382.9 370 55.9
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 4.7e-104 382.1 370 55.1
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 1.0e-103 380.9 315 61.3
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 1.0e-103 380.9 315 61.3
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 1.4e-103 380.6 324 58.0
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 1.8e-103 380.2 308 63.3
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 3.0e-103 379.4 282 66.7
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 7.5e-102 374.8 356 57.6
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 4.1e-100 369.0 289 63.3
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 5.4e-100 368.6 295 67.8
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 9.2e-100 367.9 309 59.5
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 1.6e-99 367.1 279 64.2
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 5.0e-98 362.1 324 57.1
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 3.3e-97 359.4 348 54.6
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.0e-95 354.4 263 65.8
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 1.0e-95 354.4 356 52.5
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 1.4e-95 354.0 293 59.7
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 1.2e-94 350.9 291 61.5
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 7.8e-91 338.2 375 50.9
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 1.0e-90 337.8 376 50.0
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 5.2e-87 325.5 336 50.3
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 3.0e-82 309.7 231 66.2
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 1.5e-81 307.4 329 51.1
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 2.2e-77 293.5 365 47.1
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 1.6e-72 277.3 291 50.5
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 3.6e-72 276.2 308 46.4
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 1.5e-70 270.8 310 46.8
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 3.5e-67 259.6 232 55.6
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 1.5e-62 244.2 215 57.7
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 5.8e-62 242.3 298 47.7
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 9.9e-62 241.5 293 47.4
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 3.8e-61 239.6 314 43.3
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 1.1e-60 238.0 296 46.6
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 1.1e-60 238.0 252 53.2
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 1.6e-59 234.2 216 61.1
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 7.8e-59 231.9 250 52.8
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 1.7e-58 230.7 285 46.7
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 2.8e-56 223.4 174 63.8
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 3.6e-56 223.0 194 59.3
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 4.5e-46 189.5 115 74.8
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 7.6e-46 188.7 321 39.6
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 2.9e-45 186.8 321 38.0
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 1.8e-42 177.6 119 64.7
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 3.0e-42 176.8 285 38.6
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.1e-41 174.9 166 53.0
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 4.8e-40 169.5 135 69.6
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 1.5e-38 164.5 107 69.2
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 2.0e-38 164.1 138 55.8
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 3.7e-32 143.3 300 34.7
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 7.7e-30 135.6 128 56.2
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 4.8e-24 116.3 177 36.7
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 9.1e-23 112.1 115 49.6
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 4.5e-22 109.8 63 77.8
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 7.7e-22 109.0 70 70.0
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.2e-21 107.5 63 73.0
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 1.4e-20 104.8 67 67.2
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 3.2e-20 103.6 71 64.8
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 4.2e-20 103.2 53 81.1
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 1.2e-19 101.7 56 80.4
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 1.3e-16 91.7 98 53.1
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 3.1e-15 87.0 115 43.5
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 3.2e-12 77.0 99 37.4
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 2.3e-10 70.9 50 60.0


User provided reference genes

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