Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0583 Trochodendron aralioides HOM05D007460 ORTHO05D009396 1.5e-77 292.7 147 100.0
Dinv41900 Davidia involucrata HOM05D007460 ORTHO05D009396 2.0e-40 169.5 136 68.4
TAR381G0286 Trochodendron aralioides HOM05D007460 ORTHO05D009396 1.1e-38 163.7 97 82.5
Actinidia20546 Actinidia chinensis HOM05D007460 ORTHO05D009396 3.8e-36 155.2 141 60.3
CANSAT25G2588 Cannabis sativa HOM05D007460 ORTHO05D009396 1.1e-35 153.7 144 61.1
Potri.009G140500 Populus trichocarpa HOM05D007460 ORTHO05D009396 1.5e-35 153.3 143 60.1
Sabra09G0109400 Salix brachista HOM05D007460 ORTHO05D009396 4.2e-35 151.8 143 58.0
Rhsim11G0195400 Rhododendron simsii HOM05D007460 ORTHO05D009396 1.6e-34 149.8 139 61.2
CsaV3_7G001450 Cucumis sativus L. HOM05D007460 ORTHO05D009396 4.0e-33 145.2 142 60.6
COL.COLO4_17993 Corchorus olitorius HOM05D007460 ORTHO05D009396 5.2e-33 144.8 153 54.2
Cpa.g.sc2033.1 Carica papaya HOM05D007460 ORTHO05D009396 8.8e-33 144.1 138 58.0
PGR142G0431 Punica granatum HOM05D007460 ORTHO05D009396 5.7e-32 141.4 153 53.6
CiPaw.05G087600 Carya illinoinensis HOM05D007460 ORTHO05D009396 7.5e-32 141.0 141 59.6
Atru.chr5.3484 Acer truncatum HOM05D007460 ORTHO05D009396 9.7e-32 140.6 144 55.6
Nitab4.5_0006969g0010 Nicotiana tabacum HOM05D007460 ORTHO05D009396 1.3e-31 140.2 148 56.1
ClCG02G003690 Citrullus lanatus HOM05D007460 ORTHO05D009396 1.7e-31 139.8 141 60.3
Manes.08G120200 Manihot esculenta HOM05D007460 ORTHO05D009396 1.7e-31 139.8 136 56.6
Solyc02g087400.1 Solanum lycopersicum HOM05D007460 ORTHO05D009396 3.7e-31 138.7 144 56.2
Nitab4.5_0001239g0010 Nicotiana tabacum HOM05D007460 ORTHO05D009396 6.3e-31 137.9 148 55.4
MELO3C013306.2 Cucumis melo HOM05D007460 ORTHO05D009396 1.1e-30 137.1 146 58.2
PGSC0003DMG400001299 Solanum tuberosum HOM05D007460 ORTHO05D009396 1.1e-30 137.1 148 54.7
Eucgr.I01479 Eucalyptus grandis HOM05D007460 ORTHO05D009396 2.4e-30 136.0 140 57.1
RcHm_v2.0_Chr6g0279541 Rosa chinensis HOM05D007460 ORTHO05D009396 2.4e-30 136.0 142 54.9
CDE04G3076 Ceratophyllum demersum HOM05D000201 ORTHO05D000490 3.1e-30 135.6 144 55.6
TWI79G0886 Tripterygium wilfordii HOM05D007460 ORTHO05D009396 3.1e-30 135.6 141 53.9
Prupe.8G173000 Prunus persica HOM05D007460 ORTHO05D009396 7.0e-30 134.4 151 51.7
Sopen02g032150 Solanum pennellii HOM05D007460 ORTHO05D009396 9.1e-30 134.0 144 54.9
Ciclev10028628m.g Citrus clementina HOM05D007460 ORTHO05D009396 1.2e-29 133.7 137 55.5
MD05G1128900 Malus domestica HOM05D007460 ORTHO05D009396 1.2e-29 133.7 155 50.3
QL11p053448 Quercus lobata HOM05D007460 ORTHO05D009396 1.2e-29 133.7 146 54.1
CAN.G206.79 Capsicum annuum HOM05D007460 ORTHO05D009396 1.6e-29 133.3 143 54.5
Haze_02061 Corylus avellana HOM05D007460 ORTHO05D009396 3.5e-29 132.1 140 55.7
Duzib052G0247 Durio zibethinus HOM05D007460 ORTHO05D009396 7.7e-29 131.0 150 53.3
DCAR_003202 Daucus carota HOM05D007460 ORTHO05D009396 1.3e-28 130.2 150 56.0
Aqoxy6G01856 Aquilegia oxysepala HOM05D007460 ORTHO05D009396 1.7e-28 129.8 153 50.3
Thecc.02G051900 Theobroma cacao HOM05D007460 ORTHO05D009396 2.2e-28 129.4 152 50.7
Sed0015555 Sechium edule HOM05D007460 ORTHO05D009396 2.9e-28 129.0 138 55.1
MSTRG.28026 Avicennia marina HOM05D007460 ORTHO05D009396 8.5e-28 127.5 147 53.1
Migut.N01901 Erythranthe guttata HOM05D007460 ORTHO05D009396 8.5e-28 127.5 143 52.4
arahy.Tifrunner.gnm1.ann1.T9T391 Arachis hypogaea HOM05D007460 ORTHO05D009396 1.1e-27 127.1 143 52.4
Gohir.A03G206700 Gossypium hirsutum HOM05D007460 ORTHO05D009396 1.9e-27 126.3 141 52.5
Oeu019189.1 Olea europaea HOM05D007460 ORTHO05D009396 2.5e-27 125.9 139 51.1
Gohir.D02G228100 Gossypium hirsutum HOM05D007460 ORTHO05D009396 3.2e-27 125.6 141 52.5
Lalb_Chr03g0024631 Lupinus albus HOM05D007460 ORTHO05D009396 3.2e-27 125.6 141 52.5
Gorai.005G256000 Gossypium raimondii HOM05D007460 ORTHO05D009396 4.2e-27 125.2 141 52.5
Lsat_1_v5_gn_6_28360 Lactuca sativa HOM05D007460 ORTHO05D009396 4.2e-27 125.2 143 49.7
Peaxi162Scf00332g00111 Petunia axillaris HOM05D007460 ORTHO05D009396 5.5e-27 124.8 140 55.0
Phvul.011G025300 Phaseolus vulgaris HOM05D007460 ORTHO05D009396 5.5e-27 124.8 97 63.9
Ah.12g063930 Amaranthus hybridus HOM05D007460 ORTHO05D009396 7.2e-27 124.4 131 52.7
FAN20G2849 Fragaria x ananassa HOM05D007460 ORTHO05D009396 9.4e-27 124.0 143 52.4
FAN27G2235 Fragaria x ananassa HOM05D007460 ORTHO05D009396 1.6e-26 123.2 143 51.7
Peaxi162Scf00170g00065 Petunia axillaris HOM05D007460 ORTHO05D009396 1.6e-26 123.2 104 58.7
Thhalv10000208m.g Eutrema salsugineum HOM05D007460 ORTHO05D009396 2.7e-26 122.5 144 50.0
THA.LOC104804083 Tarenaya hassleriana HOM05D007460 ORTHO05D009396 2.7e-26 122.5 148 48.6
unitig_899.g15575 Utricularia gibba HOM05D007460 ORTHO05D009396 2.7e-26 122.5 102 56.9
FvH4_2g16010 Fragaria vesca HOM05D007460 ORTHO05D009396 3.6e-26 122.1 143 51.7
FAN24G0563 Fragaria x ananassa HOM05D007460 ORTHO05D009396 3.6e-26 122.1 143 51.7
Lj3g0017881 Lotus japonicus HOM05D007460 ORTHO05D009396 8.0e-26 120.9 139 48.9
ECA233G4948 Erigeron canadensis HOM05D007460 ORTHO05D009396 1.0e-25 120.6 141 50.4
FAN15G0958 Fragaria x ananassa HOM05D007460 ORTHO05D009396 1.4e-25 120.2 143 51.0
HanXRQChr03g0091771 Helianthus annuus HOM05D007460 ORTHO05D009396 1.4e-25 120.2 142 50.7
unitig_746.g26838 Utricularia gibba HOM05D007460 ORTHO05D009396 1.8e-25 119.8 104 52.9
Psat7g178840 Pisum sativum HOM05D007460 ORTHO05D009396 5.2e-25 118.2 140 46.4
VMungo1127G1591 Vigna mungo HOM05D007460 ORTHO05D009396 6.8e-25 117.9 135 49.6
CARHR142840 Cardamine hirsuta HOM05D007460 ORTHO05D009396 8.8e-25 117.5 143 50.3
Ca_18990_v3 Cicer arietinum L. HOM05D007460 ORTHO05D009396 2.0e-24 116.3 93 59.1
Sc14g0002370 Simmondsia chinensis HOM05D007460 ORTHO05D009396 2.6e-24 115.9 137 48.9
Actinidia18021 Actinidia chinensis HOM05D007460 ORTHO05D009396 3.4e-24 115.5 75 69.3
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 3.4e-24 115.5 131 49.6
BraA08t32533Z Brassica rapa HOM05D007460 ORTHO05D009396 3.4e-24 115.5 97 60.8
A08p05160 Brassica napus HOM05D007460 ORTHO05D009396 4.4e-24 115.2 97 59.8
BcaC07g37167 Brassica carinata HOM05D007460 ORTHO05D009396 5.7e-24 114.8 97 59.8
BolC8t47357H Brassica oleracea HOM05D007460 ORTHO05D009396 5.7e-24 114.8 97 59.8
Medtr4g075710 Medicago truncatula HOM05D007460 ORTHO05D009396 5.7e-24 114.8 78 65.4
Carub.0002s2147 Capsella rubella HOM05D007460 ORTHO05D009396 7.5e-24 114.4 143 46.2
Cc10_g12130 Coffea canephora HOM05D007460 ORTHO05D009396 7.5e-24 114.4 151 45.7
C08p05400 Brassica napus HOM05D007460 ORTHO05D009396 9.8e-24 114.0 97 59.8
Glyma.11G097200 Glycine max HOM05D007460 ORTHO05D009396 9.8e-24 114.0 140 50.0
BcaB04g17460 Brassica carinata HOM05D007460 ORTHO05D009396 1.3e-23 113.6 142 48.6
Sp4g00040 Schrenkiella parvula HOM05D007460 ORTHO05D009396 2.8e-23 112.5 148 46.6
MBI05_g32371_MAGBIO Magnolia biondii HOM05D007460 ORTHO05D009396 4.8e-23 111.7 154 46.8
PSO675G2104 Papaver somniferum HOM05D007460 ORTHO05D009396 6.3e-23 111.3 153 47.1
AL4G47010 Arabidopsis lyrata HOM05D007460 ORTHO05D009396 8.3e-23 110.9 133 46.6
Aa31LG9G10 Aethionema arabicum HOM05D001485 ORTHO05D001384 1.4e-22 110.2 71 67.6
PSO541G5676 Papaver somniferum HOM05D007460 ORTHO05D009396 3.1e-22 109.0 159 49.7
SEGI_23478 Sequoiadendron giganteum HOM05D007460 ORTHO05D009396 3.1e-22 109.0 82 64.6
AT2G47450 Arabidopsis thaliana HOM05D007460 ORTHO05D009396 7.0e-22 107.8 138 47.8
ATR0661G268 Amborella trichopoda HOM05D007460 ORTHO05D009396 3.5e-21 105.5 76 61.8
HPP92_022164 Vanilla planifolia HOM05D007460 ORTHO05D009396 3.5e-21 105.5 159 45.3
Os03g0131900 Oryza sativa ssp. japonica HOM05D007460 ORTHO05D009396 1.0e-20 104.0 147 42.9
Pp3c23_11730 Physcomitrium patens HOM05D002365 ORTHO05D002574 3.8e-20 102.1 75 64.0
SMO118G0269 Selaginella moellendorffii HOM05D007460 ORTHO05D009396 3.0e-17 92.4 74 56.8
AagrBONN_evm.TU.Sc2ySwM_117.2592 Anthoceros agrestis HOM05D007460 ORTHO05D009396 4.0e-17 92.0 70 58.6
Mapoly0129s0002 Marchantia polymorpha HOM05D007460 ORTHO05D009396 9.8e-16 87.4 78 52.6
EL10Ac2g02588 Beta vulgaris HOM05D007460 ORTHO05D009396 4.5e-13 78.6 50 64.0
AUR62030672 Chenopodium quinoa HOM05D007460 ORTHO05D009396 1.3e-12 77.0 56 58.9
AUR62024876 Chenopodium quinoa HOM05D007460 ORTHO05D009396 1.7e-12 76.6 50 62.0
CBR_g4787 Chara braunii HOM05D007460 ORTHO05D009396 5.0e-12 75.1 76 43.4
TPR.G17168 Trifolium pratense HOM05D007460 ORTHO05D009396 2.8e-10 69.3 51 54.9
Cre04.g231026 Chlamydomonas reinhardtii HOM05D007460 ORTHO05D009396 1.7e-07 60.1 71 36.6
Lj5A174T74 Lonicera japonica HOM05D007460 ORTHO05D009396 3.7e-07 58.9 146 36.3


User provided reference genes

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