Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 6.1e-97 357.5 176 100.0
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 6.7e-88 327.4 188 86.7
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.4e-77 292.4 192 72.9
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 3.5e-76 288.5 188 75.5
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.7e-75 286.2 192 71.4
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 9.4e-74 280.4 188 72.3
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 8.0e-73 277.3 260 58.8
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 3.4e-71 271.9 189 70.9
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 4.4e-71 271.6 188 70.2
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 9.8e-71 270.4 188 69.1
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 1.3e-70 270.0 189 70.9
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 2.2e-70 269.2 188 70.7
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 4.8e-70 268.1 186 67.7
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 6.3e-70 267.7 186 69.4
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 4.1e-69 265.0 186 68.8
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 5.4e-69 264.6 186 70.4
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 7.0e-69 264.2 188 70.7
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 9.1e-69 263.8 188 69.1
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 9.1e-69 263.8 186 67.2
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.0e-68 262.7 188 68.1
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.5e-68 261.9 191 70.2
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 5.9e-68 261.2 188 66.0
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.9e-68 261.2 186 69.4
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.9e-68 261.2 186 69.4
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 7.7e-68 260.8 186 69.4
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 1.0e-67 260.4 188 67.6
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.3e-67 260.0 191 70.7
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.3e-67 260.0 188 67.0
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 1.3e-67 260.0 190 68.4
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 2.3e-67 259.2 182 69.8
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 2.9e-67 258.8 188 65.4
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 2.9e-67 258.8 186 67.7
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 3.8e-67 258.5 188 68.1
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 3.8e-67 258.5 191 70.2
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 5.0e-67 258.1 194 66.5
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 5.0e-67 258.1 188 67.6
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 1.1e-66 256.9 201 63.2
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.1e-66 256.9 187 68.4
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 1.9e-66 256.1 187 67.4
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 1.9e-66 256.1 190 67.9
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.9e-66 256.1 198 64.6
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 2.5e-66 255.8 194 67.0
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 5.5e-66 254.6 188 67.6
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 5.5e-66 254.6 182 68.7
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 5.5e-66 254.6 188 63.8
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 5.5e-66 254.6 188 63.8
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 7.2e-66 254.2 198 64.1
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 9.5e-66 253.8 195 64.6
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 9.5e-66 253.8 194 64.9
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.6e-65 253.1 192 66.7
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.6e-65 253.1 192 66.7
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 2.1e-65 252.7 184 64.7
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 2.1e-65 252.7 182 69.8
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 6.1e-65 251.1 200 62.5
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 8.0e-65 250.8 188 66.5
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 8.0e-65 250.8 188 66.5
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.0e-64 250.4 192 66.1
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.4e-64 250.0 185 64.3
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.4e-64 250.0 202 63.9
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 2.3e-64 249.2 182 68.1
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.0e-64 248.8 188 66.0
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 6.8e-64 247.7 188 64.4
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 8.8e-64 247.3 182 65.9
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.5e-63 246.5 186 62.4
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 2.6e-63 245.7 190 62.6
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 3.4e-63 245.4 184 65.2
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.7e-62 243.0 187 63.6
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-62 243.0 216 60.2
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 3.7e-62 241.9 187 64.2
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 1.4e-61 240.0 186 61.8
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 1.8e-61 239.6 186 62.4
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 1.8e-61 239.6 186 62.4
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 2.4e-61 239.2 180 66.1
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 2.4e-61 239.2 182 63.7
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 5.4e-61 238.0 186 63.4
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.2e-60 236.9 189 63.5
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.6e-60 236.5 182 64.3
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 4.5e-60 235.0 193 60.6
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 4.5e-60 235.0 186 62.4
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 7.8e-60 234.2 184 59.8
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 2.3e-59 232.6 186 61.3
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 5.0e-59 231.5 186 61.3
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 6.6e-59 231.1 197 58.9
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.9e-58 229.6 186 61.3
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 3.3e-58 228.8 155 74.2
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 5.6e-58 228.0 188 59.6
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.6e-57 226.5 197 59.4
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 2.1e-57 226.1 178 64.0
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.8e-56 223.0 190 58.9
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.3e-54 216.9 188 60.6
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 9.2e-53 210.7 134 76.1
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.0e-51 207.2 155 68.4
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 6.6e-51 204.5 153 67.3
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 8.6e-51 204.1 186 54.3
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 4.3e-50 201.8 153 64.1
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 5.2e-48 194.9 182 54.4
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 6.8e-48 194.5 155 64.5
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.2e-47 193.7 159 63.5
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 9.8e-47 190.7 183 51.9
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 9.8e-47 190.7 158 64.6
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 5.4e-45 184.9 149 59.7
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 2.5e-42 176.0 153 58.8
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 2.5e-42 176.0 170 54.7
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 4.3e-42 175.3 188 52.1
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 2.4e-37 159.5 138 56.5
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.5e-34 150.2 189 44.4
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 4.3e-34 148.7 191 42.9
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.2e-31 140.6 187 42.8
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 4.4e-31 138.7 133 59.4
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 2.1e-28 129.8 78 78.2
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.2e-25 120.6 182 42.9
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 1.4e-24 117.1 186 39.2
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 2.9e-22 109.4 177 38.4
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 6.0e-20 101.7 55 81.8


User provided reference genes

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