Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 4.6e-103 377.9 188 100.0
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.6e-87 326.2 188 86.7
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 5.2e-86 321.2 192 78.6
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 3.7e-84 315.1 192 77.1
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 6.3e-84 314.3 188 80.3
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 6.5e-81 304.3 189 78.8
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 2.1e-79 299.3 188 75.5
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 4.7e-79 298.1 186 75.3
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 5.2e-78 294.7 186 74.7
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 6.7e-78 294.3 191 77.0
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 2.0e-77 292.7 188 73.9
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 4.4e-77 291.6 188 72.9
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 5.7e-77 291.2 191 77.0
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 1.3e-76 290.0 189 74.1
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.7e-76 289.7 191 76.4
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 3.7e-76 288.5 186 71.5
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 3.7e-76 288.5 186 72.6
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 6.3e-76 287.7 188 75.0
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 6.3e-76 287.7 186 72.6
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 1.1e-75 287.0 182 75.8
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.1e-75 287.0 188 71.8
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.4e-75 286.6 187 74.3
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.4e-75 285.8 188 72.3
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 2.4e-75 285.8 188 72.9
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 3.1e-75 285.4 188 73.4
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 3.1e-75 285.4 194 74.2
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 5.3e-75 284.6 201 68.7
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 7.0e-75 284.3 188 72.9
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 9.1e-75 283.9 188 70.2
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 9.1e-75 283.9 198 70.2
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 1.2e-74 283.5 188 72.9
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 1.2e-74 283.5 188 69.1
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 1.2e-74 283.5 188 73.4
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.6e-74 283.1 188 71.3
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.6e-74 283.1 192 73.4
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 2.0e-74 282.7 188 73.4
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 2.7e-74 282.3 194 71.1
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 4.5e-74 281.6 188 72.9
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.0e-73 280.4 186 72.0
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 1.0e-73 280.4 198 69.2
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.0e-73 280.4 192 72.9
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.0e-73 280.4 192 72.9
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 1.3e-73 280.0 187 71.7
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.7e-73 279.6 188 68.6
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 1.7e-73 279.6 188 68.6
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 3.8e-73 278.5 182 73.6
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.0e-73 278.1 186 71.5
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 5.0e-73 278.1 260 59.2
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 6.5e-73 277.7 186 71.5
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.5e-73 277.3 186 71.5
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 8.5e-73 277.3 190 70.5
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 1.1e-72 276.9 190 69.5
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 1.5e-72 276.6 200 67.5
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 1.9e-72 276.2 188 71.3
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.9e-72 276.2 182 73.6
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 2.5e-72 275.8 190 70.5
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 2.5e-72 275.8 195 68.7
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 2.5e-72 275.8 194 69.1
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 3.2e-72 275.4 186 68.8
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 4.2e-72 275.0 188 69.1
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 5.5e-72 274.6 184 71.2
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.6e-71 273.1 182 73.1
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 4.7e-71 271.6 184 67.4
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 4.7e-71 271.6 185 68.1
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 2.3e-70 269.2 187 68.4
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 8.8e-70 267.3 216 65.3
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 5.7e-69 264.6 187 67.9
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 9.8e-69 263.8 182 69.8
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 9.8e-69 263.8 180 70.6
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 9.8e-69 263.8 202 68.3
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 1.7e-68 263.1 186 68.8
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 3.7e-68 261.9 193 66.3
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 6.3e-68 261.2 186 66.1
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 6.3e-68 261.2 186 65.6
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 6.3e-68 261.2 186 66.1
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 1.8e-67 259.6 186 66.7
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.8e-67 259.6 185 69.2
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 2.4e-67 259.2 165 77.6
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 3.1e-67 258.8 186 66.7
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 4.1e-67 258.5 184 64.1
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 5.4e-67 258.1 182 67.0
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 9.1e-67 257.3 189 67.2
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 1.6e-66 256.5 186 65.6
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 2.0e-66 256.1 178 70.2
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 2.0e-66 256.1 186 65.6
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 7.7e-66 254.2 188 64.4
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 2.3e-65 252.7 197 62.4
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.1e-64 250.4 197 62.9
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 2.8e-63 245.7 190 63.2
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.8e-62 243.0 155 77.4
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 2.0e-61 239.6 134 83.6
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.4e-61 238.8 153 76.5
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 5.7e-61 238.0 188 64.9
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 5.9e-58 228.0 186 57.5
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 7.8e-58 227.6 158 74.7
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 5.0e-57 224.9 153 68.6
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 4.3e-56 221.9 155 71.0
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 8.0e-55 217.6 182 57.7
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.4e-54 216.9 159 67.3
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 2.3e-54 216.1 183 56.8
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 3.7e-52 208.8 149 64.4
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.1e-51 207.2 165 64.8
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.3e-49 200.3 153 64.1
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.7e-49 199.9 188 56.9
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 6.4e-44 181.4 138 60.9
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 5.0e-41 171.8 191 48.7
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.9e-40 169.9 133 68.4
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 4.3e-40 168.7 189 47.6
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 4.4e-37 158.7 187 46.0
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 3.0e-33 146.0 187 46.0
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.1e-30 137.5 182 44.0
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 2.9e-28 129.4 78 80.8
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 2.1e-26 123.2 188 41.0
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 2.2e-20 103.2 56 82.1


User provided reference genes

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