Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 2.7e-146 521.9 254 100.0
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.2e-109 400.2 256 78.1
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 4.2e-107 391.7 255 76.1
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 2.1e-106 389.4 254 76.4
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.6e-106 388.3 254 76.0
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.0e-105 387.1 254 75.2
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.8e-105 386.3 254 75.6
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.7e-105 384.4 248 76.2
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.9e-104 382.9 254 75.2
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 1.6e-103 379.8 245 75.5
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 6.3e-103 377.9 249 74.7
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 2.6e-101 372.5 249 73.5
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.9e-101 371.3 248 73.8
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 5.9e-101 371.3 247 74.1
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 7.7e-101 370.9 251 72.1
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 7.7e-101 370.9 215 82.8
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.7e-100 369.8 250 74.4
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 2.9e-100 369.0 249 73.1
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 3.8e-100 368.6 248 73.0
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.8e-100 368.6 248 73.0
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 5.0e-100 368.2 245 74.7
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.1e-99 367.1 244 73.4
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.1e-99 367.1 258 70.2
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 2.5e-99 365.9 247 72.5
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 3.2e-99 365.5 251 74.5
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 9.4e-99 364.0 260 72.3
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.2e-98 363.6 261 69.3
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 2.7e-98 362.5 255 70.2
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.7e-98 362.5 250 68.8
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 3.6e-98 362.1 249 72.3
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 6.1e-98 361.3 247 73.7
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 6.1e-98 361.3 255 69.8
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 7.9e-98 360.9 251 71.7
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 8.8e-97 357.5 255 72.9
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.1e-96 357.1 255 72.9
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 2.0e-96 356.3 256 70.7
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 2.0e-96 356.3 255 69.0
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 2.2e-95 352.8 254 68.1
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 4.8e-95 351.7 254 67.3
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 8.2e-95 350.9 247 71.3
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 1.4e-94 350.1 254 68.9
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 2.4e-94 349.4 256 69.5
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 3.1e-94 349.0 258 69.0
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 3.4e-93 345.5 253 69.6
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 5.9e-93 344.7 247 71.3
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 5.9e-93 344.7 245 71.0
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 7.7e-93 344.4 251 69.7
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 1.3e-92 343.6 252 67.5
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.3e-92 343.6 253 70.8
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 1.7e-92 343.2 243 70.0
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 2.2e-92 342.8 233 70.0
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 2.9e-92 342.4 254 68.1
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 8.5e-92 340.9 239 71.1
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 1.4e-91 340.1 233 68.2
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.4e-91 340.1 237 71.3
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 1.9e-91 339.7 218 75.7
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 4.2e-91 338.6 255 67.5
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 4.2e-91 338.6 255 67.5
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 5.5e-91 338.2 205 75.6
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 5.5e-91 338.2 205 75.6
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 1.2e-90 337.0 250 68.0
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 3.6e-90 335.5 271 67.9
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 6.1e-90 334.7 234 67.9
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 6.1e-90 334.7 245 68.6
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 1.4e-89 333.6 233 70.8
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.3e-89 332.8 242 69.0
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 2.3e-89 332.8 205 75.6
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 3.0e-89 332.4 239 68.2
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 6.7e-89 331.3 247 70.0
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 6.7e-89 331.3 199 78.4
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 3.3e-88 328.9 224 72.8
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 4.4e-88 328.6 201 75.6
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 9.7e-88 327.4 253 65.6
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 1.7e-87 326.6 234 67.9
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 2.8e-87 325.9 193 77.7
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 6.3e-87 324.7 235 67.7
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.1e-86 323.9 253 65.6
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 2.4e-86 322.8 243 64.6
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 4.1e-86 322.0 255 67.1
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 9.1e-86 320.9 227 70.5
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 1.0e-84 317.4 211 72.5
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 3.8e-84 315.5 288 58.7
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 9.4e-83 310.8 183 78.1
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 1.6e-82 310.1 186 75.8
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 8.0e-82 307.8 196 75.0
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.0e-81 307.4 221 68.3
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 1.4e-81 307.0 207 72.0
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 8.8e-81 304.3 253 62.8
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 8.8e-81 304.3 211 69.7
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.3e-79 300.4 182 76.4
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 4.1e-78 295.4 167 81.4
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.6e-77 293.5 178 77.5
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 2.0e-77 293.1 246 62.6
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 2.7e-77 292.7 175 78.9
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.7e-77 292.7 169 78.7
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 3.0e-73 279.3 170 78.2
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 8.5e-68 261.2 254 56.3
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 2.3e-65 253.1 163 70.6
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.7e-64 248.4 182 69.8
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 7.0e-62 241.5 138 83.3
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.2e-61 240.7 228 57.5
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 7.3e-59 231.5 171 62.6
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 3.7e-55 219.2 196 53.6
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 1.1e-54 217.6 200 52.5
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.7e-39 167.2 130 65.4
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 4.1e-38 162.5 158 53.8
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 8.9e-33 144.8 249 39.8
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.4e-25 120.9 75 77.3
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.4e-24 116.3 63 84.1
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 2.4e-22 110.2 59 84.7
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 3.5e-21 106.3 169 41.4
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.0e-20 104.8 80 63.8
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 1.8e-09 67.4 61 49.2


User provided reference genes

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