Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 7.6e-40 166.8 88 100.0
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 1.4e-30 136.0 81 88.9
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 2.5e-30 135.2 82 86.6
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 4.2e-30 134.4 85 82.4
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 1.2e-29 132.9 81 84.0
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 1.6e-29 132.5 81 85.2
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 1.6e-29 132.5 81 87.7
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 2.7e-29 131.7 80 85.0
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 3.5e-29 131.3 86 79.1
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 6.0e-29 130.6 86 79.1
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 7.9e-29 130.2 81 81.5
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 1.8e-28 129.0 82 84.1
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 1.8e-28 129.0 82 82.9
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 3.9e-28 127.9 82 81.7
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 5.1e-28 127.5 88 75.0
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 5.1e-28 127.5 81 84.0
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.9e-27 125.6 82 79.3
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 2.5e-27 125.2 88 73.9
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 2.5e-27 125.2 85 75.3
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 2.5e-27 125.2 86 75.6
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 2.5e-27 125.2 82 79.3
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 3.3e-27 124.8 81 81.5
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 3.3e-27 124.8 82 76.8
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 3.3e-27 124.8 82 79.3
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 4.3e-27 124.4 82 78.0
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 4.3e-27 124.4 82 81.7
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 5.6e-27 124.0 82 78.0
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 7.4e-27 123.6 82 78.0
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 7.4e-27 123.6 81 77.8
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 7.4e-27 123.6 87 73.6
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 1.3e-26 122.9 82 76.8
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 1.6e-26 122.5 85 74.1
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 1.6e-26 122.5 78 79.5
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 2.1e-26 122.1 81 76.5
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 2.1e-26 122.1 87 72.4
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 2.8e-26 121.7 81 75.3
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 2.8e-26 121.7 83 73.5
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 3.7e-26 121.3 80 78.8
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 8.2e-26 120.2 80 80.0
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 8.2e-26 120.2 82 78.0
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 1.1e-25 119.8 84 75.0
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.1e-25 119.8 86 74.4
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 1.4e-25 119.4 80 75.0
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 1.4e-25 119.4 77 77.9
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 1.8e-25 119.0 82 75.6
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 2.4e-25 118.6 80 76.2
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-25 118.6 73 82.2
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 3.1e-25 118.2 78 76.9
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 4.0e-25 117.9 80 73.8
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 5.3e-25 117.5 82 74.4
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 5.3e-25 117.5 81 74.1
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 5.3e-25 117.5 84 75.0
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 6.9e-25 117.1 78 78.2
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 6.9e-25 117.1 78 76.9
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 9.0e-25 116.7 78 76.9
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 9.0e-25 116.7 80 72.5
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 1.2e-24 116.3 80 75.0
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 1.5e-24 115.9 78 75.6
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 2.0e-24 115.5 78 75.6
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 2.0e-24 115.5 75 78.7
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 2.0e-24 115.5 81 72.8
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 2.0e-24 115.5 81 74.1
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 2.0e-24 115.5 75 80.0
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 2.6e-24 115.2 82 72.0
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 5.8e-24 114.0 83 71.1
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 1.0e-23 113.2 81 70.4
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 1.0e-23 113.2 80 75.0
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 1.7e-23 112.5 82 72.0
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.7e-23 112.5 77 75.3
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 2.2e-23 112.1 80 71.2
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 2.2e-23 112.1 77 75.3
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 2.9e-23 111.7 82 70.7
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 3.8e-23 111.3 77 74.0
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 6.5e-23 110.5 81 69.1
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 8.4e-23 110.2 78 73.1
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 8.4e-23 110.2 82 69.5
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 8.4e-23 110.2 77 71.4
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 1.1e-22 109.8 73 75.3
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 2.5e-22 108.6 75 74.7
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 2.5e-22 108.6 81 67.9
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 7.1e-22 107.1 82 69.5
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 3.0e-20 101.7 66 78.8
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 5.1e-20 100.9 79 67.1
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 8.7e-20 100.1 82 67.1
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 1.3e-18 96.3 68 73.5
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 3.7e-18 94.7 61 78.7
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.4e-17 92.8 135 45.2
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 4.5e-16 87.8 70 65.7
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 1.7e-15 85.9 60 71.7
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 3.8e-15 84.7 77 55.8
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 1.4e-14 82.8 77 51.9
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 3.2e-14 81.6 76 57.9
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 2.2e-10 68.9 44 75.0
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 3.7e-10 68.2 45 68.9
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 3.7e-10 68.2 46 69.6
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 1.8e-09 65.9 46 69.6
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 1.8e-09 65.9 46 69.6
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 4.5e-08 61.2 38 76.3
BcaC03g17585 Brassica carinata HOM05D007648 ORTHO05D009613 3.8e-07 58.2 80 48.8
C02p55660 Brassica napus HOM05D000430 ORTHO05D021673 1.4e-06 56.2 41 70.7
BolC2t11621H Brassica oleracea HOM05D000874 ORTHO05D021673 1.4e-06 56.2 41 70.7
Cre14.g626667 Chlamydomonas reinhardtii HOM05D007648 ORTHO05D009613 5.5e-06 54.3 74 45.9
A02p36670 Brassica napus HOM05D000874 ORTHO05D021673 7.2e-06 53.9 39 71.8
BraA02t08662Z Brassica rapa HOM05D000874 ORTHO05D021673 7.2e-06 53.9 39 71.8


User provided reference genes

Program Settings