Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.8e-105 384.8 188 100.0
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 5.3e-91 337.8 185 89.7
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 1.6e-74 283.1 167 82.0
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 5.0e-73 278.1 166 78.9
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 1.1e-72 276.9 166 78.9
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 4.2e-72 275.0 166 78.3
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 2.1e-71 272.7 167 77.2
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 3.6e-71 271.9 166 78.3
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 4.7e-71 271.6 166 79.5
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 6.1e-71 271.2 167 78.4
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 1.0e-70 270.4 167 77.8
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.0e-70 270.4 164 79.3
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.8e-70 269.6 167 77.2
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 3.0e-70 268.9 167 77.2
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 5.2e-70 268.1 166 76.5
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 6.8e-70 267.7 167 76.6
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 8.8e-70 267.3 167 77.2
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 8.8e-70 267.3 167 76.6
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 2.0e-69 266.2 167 76.6
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 2.0e-69 266.2 167 76.6
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 2.6e-69 265.8 167 75.4
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 3.4e-69 265.4 167 76.0
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 4.4e-69 265.0 168 74.4
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 5.7e-69 264.6 166 78.3
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.5e-69 264.2 166 77.1
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 2.2e-68 262.7 167 76.6
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.7e-68 261.9 166 76.5
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 3.7e-68 261.9 166 76.5
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 3.7e-68 261.9 166 76.5
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 4.8e-68 261.5 166 76.5
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 8.3e-68 260.8 164 77.4
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 1.4e-67 260.0 168 73.8
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 1.4e-67 260.0 167 73.7
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.4e-67 260.0 167 74.3
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 1.4e-67 260.0 166 75.9
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 4.1e-67 258.5 166 75.9
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 4.1e-67 258.5 164 75.6
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 4.1e-67 258.5 173 73.4
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.4e-67 258.1 171 74.9
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 5.4e-67 258.1 168 73.2
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 5.4e-67 258.1 168 73.2
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 9.1e-67 257.3 160 76.2
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 9.1e-67 257.3 167 73.1
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 1.2e-66 256.9 181 69.1
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 2.0e-66 256.1 167 73.7
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 2.7e-66 255.8 167 72.5
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 3.5e-66 255.4 167 73.7
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.5e-66 255.4 166 73.5
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 4.5e-66 255.0 167 74.3
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 4.5e-66 255.0 167 72.5
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 4.5e-66 255.0 168 73.2
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 7.7e-66 254.2 167 72.5
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 7.7e-66 254.2 166 72.3
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 1.0e-65 253.8 174 70.7
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 2.9e-65 252.3 167 73.1
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 5.0e-65 251.5 167 72.5
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 5.0e-65 251.5 168 72.0
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 5.0e-65 251.5 168 72.0
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 6.5e-65 251.1 167 73.1
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 6.5e-65 251.1 168 70.8
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 1.1e-64 250.4 166 72.9
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 1.1e-64 250.4 195 65.6
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 1.9e-64 249.6 166 72.3
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 1.9e-64 249.6 166 73.5
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 2.5e-64 249.2 167 71.3
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 3.2e-64 248.8 167 71.9
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 3.2e-64 248.8 167 72.5
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 3.2e-64 248.8 166 71.7
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 4.2e-64 248.4 167 69.5
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 4.2e-64 248.4 166 71.7
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 5.5e-64 248.1 172 68.6
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 5.5e-64 248.1 167 70.7
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 7.2e-64 247.7 167 71.3
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 7.2e-64 247.7 167 71.3
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 2.1e-63 246.1 166 71.7
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 2.1e-63 246.1 166 72.3
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 3.6e-63 245.4 166 71.1
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 4.7e-63 245.0 167 70.1
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 6.1e-63 244.6 154 74.7
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.4e-62 243.4 166 72.3
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 1.8e-62 243.0 165 71.5
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 2.3e-62 242.7 197 61.4
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 4.0e-62 241.9 166 69.9
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 6.8e-62 241.1 165 71.5
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 1.5e-61 240.0 167 70.7
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 1.5e-61 240.0 169 71.0
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 3.4e-61 238.8 168 70.8
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 1.7e-60 236.5 167 70.7
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 2.2e-60 236.1 167 70.1
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 2.8e-60 235.7 167 69.5
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 4.9e-60 235.0 167 69.5
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 1.8e-59 233.0 199 60.3
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.4e-59 232.6 167 65.9
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 7.8e-58 227.6 167 67.1
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 1.0e-57 227.3 166 68.1
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 1.7e-57 226.5 233 54.1
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 5.0e-57 224.9 167 67.1
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 6.6e-57 224.6 138 74.6
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.9e-56 223.0 187 61.0
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.2e-55 220.3 167 68.3
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 4.7e-55 218.4 167 67.1
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 4.4e-53 211.8 174 63.8
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 3.5e-50 202.2 207 53.1
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 1.6e-47 193.4 182 59.3
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 7.5e-45 184.5 173 54.3
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 4.9e-44 181.8 177 52.5
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 5.4e-43 178.3 160 60.0
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.9e-41 172.2 131 66.4
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 2.1e-39 166.4 168 53.0
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 1.8e-38 163.3 166 51.8
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 7.5e-37 157.9 139 56.8
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 2.2e-36 156.4 157 54.1
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 9.2e-27 124.4 83 69.9
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 3.5e-26 122.5 172 43.6
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 7.8e-26 121.3 87 59.8
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.7e-25 120.2 81 66.7
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 2.3e-25 119.8 87 58.6
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 6.9e-22 108.2 60 78.3
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 9.0e-22 107.8 136 41.2
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 3.8e-20 102.4 130 44.6
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.0e-17 94.4 81 60.5
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 5.1e-17 92.0 77 57.1
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 1.3e-15 87.4 58 70.7
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 8.1e-15 84.7 57 68.4
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 2.0e-13 80.1 151 35.1
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 2.2e-12 76.6 56 64.3
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 2.9e-12 76.3 60 61.7
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.4e-11 73.9 80 52.5
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 6.7e-09 65.1 56 57.1
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 3.1e-06 56.2 36 80.6


User provided reference genes

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