Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 5.6e-220 767.3 386 100.0
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.6e-211 739.2 386 96.9
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.2e-168 595.9 373 82.0
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.2e-168 595.9 373 82.0
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 2.0e-161 572.8 386 75.1
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 8.2e-155 550.8 376 73.9
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 3.1e-154 548.9 383 72.1
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 9.1e-154 547.4 378 72.2
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 9.1e-154 547.4 383 72.3
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 2.0e-153 546.2 384 72.4
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 4.5e-153 545.0 382 72.3
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 5.9e-153 544.7 383 71.8
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 1.0e-152 543.9 383 70.8
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 3.8e-152 542.0 377 71.6
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 5.0e-152 541.6 381 71.4
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.9e-151 539.7 383 70.5
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 3.2e-151 538.9 381 71.7
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 9.4e-151 537.3 377 71.1
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 9.4e-151 537.3 376 72.1
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 1.2e-150 537.0 376 71.0
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 2.1e-150 536.2 366 75.4
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 2.1e-150 536.2 387 68.7
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 2.1e-150 536.2 376 71.8
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 2.7e-150 535.8 384 71.4
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 3.6e-150 535.4 381 71.1
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 6.1e-150 534.6 387 70.3
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 1.0e-149 533.9 380 70.0
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 1.0e-149 533.9 373 71.6
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 1.4e-149 533.5 387 68.7
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 1.4e-149 533.5 385 69.6
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 1.8e-149 533.1 380 70.8
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.3e-149 532.7 377 70.8
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 3.9e-149 531.9 371 73.3
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 3.9e-149 531.9 379 70.7
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.2e-149 531.6 377 70.6
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 5.2e-149 531.6 386 68.7
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 6.7e-149 531.2 380 71.6
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 2.0e-148 529.6 386 67.6
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 2.0e-148 529.6 384 69.5
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 3.3e-148 528.9 388 69.6
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 3.3e-148 528.9 379 69.4
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 5.7e-148 528.1 378 70.4
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 2.2e-147 526.2 384 70.3
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 6.3e-147 524.6 377 70.6
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 2.4e-146 522.7 386 66.8
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 4.1e-146 521.9 382 69.9
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 4.1e-146 521.9 383 68.7
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 5.3e-146 521.5 383 68.1
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 2.6e-145 519.2 376 68.9
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 2.6e-145 519.2 371 70.9
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 3.5e-145 518.8 386 66.6
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 1.3e-144 516.9 386 66.6
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 1.7e-144 516.5 383 69.5
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 1.7e-144 516.5 383 67.9
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.1e-143 513.8 377 68.2
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.9e-143 513.1 384 68.8
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.9e-143 513.1 381 67.5
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 7.2e-143 511.1 363 71.9
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 1.6e-142 510.0 379 65.7
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 2.1e-142 509.6 379 68.1
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 6.1e-142 508.1 383 67.6
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.4e-141 506.9 376 68.1
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 4.0e-141 505.4 449 60.4
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 5.2e-141 505.0 375 68.5
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 6.7e-141 504.6 384 66.1
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 6.7e-141 504.6 386 67.6
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 1.2e-140 503.8 379 67.3
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 1.2e-140 503.8 379 67.3
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.2e-140 503.8 385 66.5
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 1.2e-140 503.8 379 67.0
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 4.4e-140 501.9 377 67.6
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 7.5e-140 501.1 379 67.0
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 9.7e-140 500.7 376 67.6
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 9.7e-140 500.7 379 67.8
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 8.2e-139 497.7 374 69.8
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 1.1e-138 497.3 379 67.0
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 1.4e-138 496.9 376 70.7
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 5.3e-138 495.0 375 66.7
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 5.3e-138 495.0 379 66.0
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 5.3e-138 495.0 382 65.2
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 9.1e-138 494.2 357 70.3
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 2.7e-137 492.7 379 65.7
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 7.7e-137 491.1 379 66.2
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 2.9e-136 489.2 374 65.0
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 5.0e-136 488.4 384 63.8
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 1.1e-135 487.3 404 62.6
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 1.1e-135 487.3 386 64.5
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.2e-134 483.8 369 65.6
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 1.6e-134 483.4 379 67.5
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.0e-133 480.7 377 64.5
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 2.6e-132 476.1 373 64.1
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 5.7e-132 474.9 380 66.3
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 9.8e-132 474.2 379 66.0
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.1e-130 470.7 380 65.8
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 2.0e-129 466.5 367 65.9
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 5.4e-122 441.8 377 60.5
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.6e-121 440.3 371 62.5
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 2.7e-121 439.5 364 64.8
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 1.7e-120 436.8 407 59.2
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 7.5e-116 421.4 383 58.5
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 4.9e-115 418.7 384 58.9
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 2.3e-112 409.8 377 56.2
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 1.5e-108 397.1 378 55.6
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 7.5e-108 394.8 374 55.6
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 4.6e-105 385.6 377 54.1
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 7.8e-105 384.8 393 52.4
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.0e-104 384.4 375 53.1
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 4.3e-103 379.0 382 55.0
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 4.0e-101 372.5 376 52.1
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 4.6e-97 359.0 321 60.7
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 2.9e-91 339.7 249 71.1
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 3.9e-88 329.3 280 60.4
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 5.8e-84 315.5 372 47.3
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.2e-83 313.5 224 67.9
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 4.2e-82 309.3 326 52.5
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 4.5e-76 289.3 393 43.3
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.3e-75 287.7 177 75.7
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.3e-75 287.7 177 75.7
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 8.7e-56 221.9 379 37.2
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 2.0e-52 210.7 170 61.2
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 1.5e-47 194.5 394 36.5
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 9.7e-47 191.8 116 77.6
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.4e-37 161.4 396 32.8
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.7e-35 154.5 103 73.8
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.9e-32 143.3 136 56.6
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 9.7e-31 138.7 148 54.1
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 6.3e-30 136.0 83 75.9
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 2.3e-24 117.5 390 29.7
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 6.6e-11 72.8 69 56.5
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 5.5e-10 69.7 73 47.9
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 5.5e-10 69.7 73 47.9
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 1.0e-08 65.5 304 25.0
Os01g0594800 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 1.0e-08 65.5 107 40.2
CSS0030954 Camellia sinensis var. sinensis HOM05D004578 ORTHO05D005529 6.3e-06 56.2 421 25.2
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 8.3e-06 55.8 397 23.9


User provided reference genes

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