Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0236 Trochodendron aralioides HOM05D007570 ORTHO05D009365 2.8e-120 437.6 383 100.0
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 9.1e-39 166.8 386 60.9
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 2.3e-34 152.1 349 60.7
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 9.2e-31 140.2 332 58.7
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 4.3e-28 131.3 374 54.0
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 3.0e-26 125.2 362 54.1
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 1.3e-24 119.8 386 35.8
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 1.3e-24 119.8 354 54.8
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 4.9e-24 117.9 315 55.2
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 1.1e-23 116.7 186 40.3
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 2.4e-23 115.5 321 57.9
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 2.4e-23 115.5 330 54.8
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 5.4e-23 114.4 352 54.3
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 5.4e-23 114.4 369 52.0
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 1.6e-22 112.8 352 54.3
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 2.0e-22 112.5 345 58.0
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 2.7e-22 112.1 321 57.6
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 1.3e-21 109.8 347 40.6
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 1.7e-21 109.4 357 52.1
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 3.0e-21 108.6 355 54.1
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 3.0e-21 108.6 355 51.5
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 3.9e-21 108.2 152 42.8
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 3.9e-21 108.2 201 37.8
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 8.6e-21 107.1 317 40.4
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 8.6e-21 107.1 201 37.8
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 1.5e-20 106.3 344 51.7
HPP92_020822 Vanilla planifolia HOM05D007570 ORTHO05D009365 2.5e-20 105.5 326 52.5
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 5.6e-20 104.4 373 48.3
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 9.5e-20 103.6 319 37.6
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 6.2e-19 100.9 318 52.8
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 1.8e-18 99.4 332 50.6
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 1.8e-18 99.4 332 50.6
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 4.0e-18 98.2 314 53.5
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 5.2e-18 97.8 153 63.4
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 4.4e-17 94.7 353 52.4
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 2.9e-16 92.0 149 36.2
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 1.4e-15 89.7 312 52.9
FAN03G2441 Fragaria x ananassa HOM05D002709 ORTHO05D002914 1.9e-15 89.4 64 67.2
FAN10G3422 Fragaria x ananassa HOM05D007570 ORTHO05D009365 7.0e-15 87.4 64 67.2
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 7.0e-15 87.4 359 31.2
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 1.6e-14 86.3 305 31.5
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 2.7e-14 85.5 141 38.3
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 2.7e-14 85.5 316 54.1
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 3.5e-14 85.1 149 36.2
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 6.0e-14 84.3 144 38.2
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 6.0e-14 84.3 313 54.0
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 7.8e-14 84.0 139 33.8
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 7.8e-14 84.0 311 50.2
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 7.8e-14 84.0 340 52.1
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 7.8e-14 84.0 147 34.0
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 7.8e-14 84.0 142 35.9
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 1.0e-13 83.6 47 72.3
MD00G1202400 Malus domestica HOM05D007570 ORTHO05D009365 1.0e-13 83.6 97 49.5
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 1.7e-13 82.8 316 32.6
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 6.6e-13 80.9 147 42.9
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 8.6e-13 80.5 146 41.8
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 1.9e-12 79.3 282 36.5
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 1.9e-12 79.3 352 30.1
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 9.5e-12 77.0 139 32.4
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 4.7e-11 74.7 47 70.2
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 8.1e-11 73.9 144 34.0
GSVIVG01013840001 Vitis vinifera HOM05D007570 ORTHO05D009365 3.1e-10 72.0 47 68.1
Sp6g29270 Schrenkiella parvula HOM05D007570 ORTHO05D009365 8.9e-10 70.5 168 41.1
Prupe.2G007100 Prunus persica HOM05D007570 ORTHO05D009365 2.0e-09 69.3 46 60.9
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 2.6e-09 68.9 44 59.1
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 4.4e-09 68.2 187 31.0
MD11G1161100 Malus domestica HOM05D007570 ORTHO05D009365 5.8e-09 67.8 50 58.0
Actinidia35565 Actinidia chinensis HOM05D007570 ORTHO05D009365 7.5e-09 67.4 279 34.4
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 7.5e-09 67.4 137 39.4
AUR62028022 Chenopodium quinoa HOM05D007570 ORTHO05D009365 9.8e-09 67.0 51 56.9
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 1.7e-08 66.2 49 57.1
Haze_00350 Corylus avellana HOM05D007570 ORTHO05D009365 2.9e-08 65.5 109 44.0
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 2.9e-08 65.5 44 56.8
HanXRQChr10g0294781 Helianthus annuus HOM05D007570 ORTHO05D009365 2.9e-08 65.5 146 39.0
ATR0680G349 Amborella trichopoda HOM05D007570 ORTHO05D009365 3.7e-08 65.1 59 54.2
EL10Ac2g03647 Beta vulgaris HOM05D007570 ORTHO05D009365 2.4e-07 62.4 45 57.8
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 2.4e-07 62.4 46 56.5
FAN10G4006 Fragaria x ananassa HOM05D007570 ORTHO05D009365 3.2e-07 62.0 51 51.0
Lj5C430G10 Lonicera japonica HOM05D007570 ORTHO05D009365 3.2e-07 62.0 44 56.8
SalBow3G4252 Salvia bowleyana HOM05D007570 ORTHO05D009365 5.4e-07 61.2 46 54.3
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 1.2e-06 60.1 144 38.2
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 1.6e-06 59.7 169 37.9
ECA234G3939 Erigeron canadensis HOM05D007570 ORTHO05D009365 1.6e-06 59.7 44 54.5
BcaB08g36948 Brassica carinata HOM05D007570 ORTHO05D009365 2.1e-06 59.3 144 41.7
DCAR_001944 Daucus carota HOM05D007570 ORTHO05D009365 3.5e-06 58.5 49 51.0
Lj5C430G7 Lonicera japonica HOM05D007570 ORTHO05D009365 6.0e-06 57.8 74 41.9
ClCG02G007820 Citrullus lanatus HOM05D021906 ORTHO05D009365 7.8e-06 57.4 43 60.5


User provided reference genes

Program Settings