Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0189 Trochodendron aralioides HOM05D005471 ORTHO05D006170 1.4e-171 606.3 318 100.0
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 1.4e-139 500.0 308 81.8
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 4.0e-139 498.4 311 80.1
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 5.0e-134 481.5 311 78.5
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 1.1e-133 480.3 305 78.0
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 2.3e-131 472.6 309 77.3
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 5.2e-131 471.5 303 77.9
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 1.2e-130 470.3 314 76.4
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 2.6e-130 469.2 319 77.4
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 9.8e-130 467.2 308 77.9
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 3.7e-129 465.3 307 77.2
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 8.3e-129 464.2 310 74.8
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.4e-128 462.6 313 74.4
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 9.2e-128 460.7 307 76.5
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 2.7e-127 459.1 309 76.4
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.5e-127 458.8 307 75.2
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 3.5e-127 458.8 307 75.2
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 4.6e-127 458.4 358 68.7
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 4.6e-127 458.4 307 74.6
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 4.6e-127 458.4 309 74.8
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 7.8e-127 457.6 302 76.2
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 3.0e-126 455.7 307 75.9
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 3.0e-126 455.7 313 73.2
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.0e-126 455.7 307 74.6
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 3.9e-126 455.3 308 74.7
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 3.9e-126 455.3 311 74.0
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 5.0e-126 454.9 307 74.3
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 6.6e-126 454.5 327 71.6
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 1.9e-125 453.0 302 79.1
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 1.9e-125 453.0 307 73.9
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 2.5e-125 452.6 307 75.9
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 4.3e-125 451.8 309 74.4
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 4.3e-125 451.8 307 73.9
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 5.6e-125 451.4 307 72.3
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 7.3e-125 451.1 309 74.4
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 9.5e-125 450.7 309 74.4
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 1.6e-124 449.9 299 76.6
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 2.8e-124 449.1 307 74.3
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 3.6e-124 448.7 308 74.7
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 1.1e-123 447.2 307 74.3
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.1e-123 447.2 307 73.9
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 1.4e-123 446.8 318 72.6
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 1.2e-122 443.7 301 75.7
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 1.5e-122 443.4 302 75.5
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.0e-122 443.0 307 73.3
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 2.6e-122 442.6 307 72.6
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 5.8e-122 441.4 308 72.1
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 1.3e-121 440.3 307 72.6
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 2.2e-121 439.5 307 72.0
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 2.9e-121 439.1 314 72.3
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 1.4e-120 436.8 319 72.1
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.4e-120 436.8 307 73.3
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 4.1e-120 435.3 308 72.1
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 9.2e-120 434.1 334 68.6
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 1.2e-119 433.7 307 72.3
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 6.0e-119 431.4 307 72.6
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 1.3e-118 430.3 307 72.3
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 1.3e-118 430.3 307 72.6
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 5.1e-118 428.3 299 73.2
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 3.3e-117 425.6 306 70.3
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 3.3e-117 425.6 303 72.6
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 5.6e-117 424.9 306 70.3
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 7.3e-117 424.5 307 70.4
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 2.1e-116 422.9 310 70.0
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 3.6e-116 422.2 310 71.0
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 1.8e-115 419.9 307 69.7
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 3.1e-115 419.1 307 70.4
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 3.1e-115 419.1 306 69.0
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 3.1e-115 419.1 336 66.4
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 3.1e-115 419.1 300 72.3
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 1.2e-114 417.2 300 73.3
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 2.0e-114 416.4 306 69.3
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 2.0e-114 416.4 309 69.3
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 4.4e-114 415.2 308 68.5
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 1.7e-113 413.3 334 65.0
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 2.2e-113 412.9 308 68.5
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 4.9e-113 411.8 306 69.0
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 4.1e-112 408.7 314 68.2
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 2.1e-111 406.4 309 68.0
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 4.6e-111 405.2 303 68.0
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 1.0e-110 404.1 299 68.6
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 2.3e-110 402.9 310 67.1
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 3.0e-110 402.5 309 68.9
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 1.1e-109 400.6 310 66.8
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 1.9e-109 399.8 307 68.1
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 9.0e-107 391.0 312 65.7
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 9.0e-107 391.0 307 66.8
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 1.2e-106 390.6 308 66.6
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 9.9e-106 387.5 306 66.0
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 7.8e-103 377.9 243 77.4
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 1.0e-102 377.5 307 63.8
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 1.5e-101 373.6 342 59.6
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 1.9e-101 373.2 306 63.1
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 5.8e-98 361.7 310 60.3
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 9.9e-98 360.9 310 60.3
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 2.2e-97 359.8 332 60.8
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 1.4e-96 357.1 311 60.1
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 2.3e-94 349.7 307 58.3
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 8.7e-94 347.8 304 62.2
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 2.4e-91 339.7 297 62.3
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 7.6e-90 334.7 308 57.1
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 2.4e-88 329.7 229 72.1
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 2.7e-87 326.2 234 72.6
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 1.0e-86 324.3 357 53.2
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 2.8e-84 316.2 306 56.2
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 7.6e-82 308.1 307 58.0
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 8.2e-76 288.1 310 51.6
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 4.1e-75 285.8 263 59.3
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 2.5e-69 266.5 179 73.2
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 9.7e-69 264.6 304 49.0
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 4.1e-67 259.2 299 46.5
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 5.3e-67 258.8 304 46.4
CBR_g49495 Chara braunii HOM05D005471 ORTHO05D006170 6.9e-67 258.5 331 44.4
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 8.8e-62 241.5 170 70.6
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 2.2e-57 226.9 204 58.3
vmacro21420 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 8.5e-57 224.9 156 75.0
Haze_22399 Corylus avellana HOM05D005471 ORTHO05D006170 5.5e-56 222.2 330 45.8
Haze_22407 Corylus avellana HOM05D005471 ORTHO05D006170 8.8e-54 214.9 344 43.6
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 2.6e-45 186.8 185 55.1
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 7.0e-43 178.7 163 57.7
Gorai.012G030800 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.2e-39 167.9 109 77.1
Gohir.D04G027975 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.6e-39 166.4 109 76.1
Gohir.D12G192766 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.8e-38 164.1 109 76.1
Gohir.A12G016250 Gossypium hirsutum HOM05D005471 ORTHO05D006170 5.7e-37 159.1 109 74.3
QL12p038454 Quercus lobata HOM05D005471 ORTHO05D006170 5.4e-35 152.5 117 71.8
DCAR_020059 Daucus carota HOM05D005471 ORTHO05D006170 7.2e-32 142.1 96 76.0
Cpa.g.sc142.58 Carica papaya HOM05D005471 ORTHO05D006170 1.3e-28 131.3 88 76.1
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 3.7e-28 129.8 102 64.7
Peaxi162Scf00448g00027 Petunia axillaris HOM05D005471 ORTHO05D006170 5.4e-27 125.9 117 55.6
Gorai.001G227100 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.4e-22 111.3 67 80.6
SEGI_29276 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 7.8e-18 95.5 81 64.2
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 1.5e-16 91.3 51 80.4
Gohir.D11G128350 Gossypium hirsutum HOM05D005471 ORTHO05D006170 6.8e-14 82.4 50 76.0
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 3.2e-11 73.6 53 66.0
Cre07.g320250 Chlamydomonas reinhardtii HOM05D005471 ORTHO05D006170 9.5e-08 62.0 174 27.6


User provided reference genes

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