Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0167 Trochodendron aralioides HOM05D001418 ORTHO05D049459 1.9e-37 158.7 82 100.0
TAR636G2883 Trochodendron aralioides HOM05D001418 ORTHO05D002038 6.7e-14 80.5 54 81.5
TAR383G0787 Trochodendron aralioides HOM05D001418 ORTHO05D002038 1.5e-13 79.3 60 75.0
TAR383G0277 Trochodendron aralioides HOM05D001418 ORTHO05D002038 2.5e-13 78.6 60 75.0
Aqoxy7G03363 Aquilegia oxysepala HOM05D001418 ORTHO05D002038 3.3e-13 78.2 62 69.4
Nn2g12433 Nelumbo nucifera HOM05D001418 ORTHO05D002038 9.6e-13 76.6 69 60.9
Ah.09g228800 Amaranthus hybridus HOM05D001418 ORTHO05D002038 1.3e-12 76.3 55 69.1
Nn8g39967 Nelumbo nucifera HOM05D001418 ORTHO05D002038 1.3e-12 76.3 68 66.2
Sc18g0003040 Simmondsia chinensis HOM05D001418 ORTHO05D002038 1.6e-12 75.9 57 71.9
TAR626G0066 Trochodendron aralioides HOM05D001418 ORTHO05D002038 1.6e-12 75.9 61 70.5
Dinv42837 Davidia involucrata HOM05D001418 ORTHO05D002038 2.1e-12 75.5 57 64.9
Dinv43262 Davidia involucrata HOM05D001418 ORTHO05D002038 2.1e-12 75.5 57 64.9
Ah.14g084560 Amaranthus hybridus HOM05D001418 ORTHO05D002038 2.8e-12 75.1 57 73.7
Dinv41361 Davidia involucrata HOM05D001418 ORTHO05D002038 2.8e-12 75.1 65 63.1
GSVIVG01023638001 Vitis vinifera HOM05D001418 ORTHO05D002038 8.2e-12 73.6 63 66.7
CDE05G2103 Ceratophyllum demersum HOM05D001418 ORTHO05D002038 1.1e-11 73.2 57 70.2
GSVIVG01035980001 Vitis vinifera HOM05D001418 ORTHO05D002038 3.1e-11 71.6 55 74.5
CSS0043344 Camellia sinensis var. sinensis HOM05D001418 ORTHO05D002038 6.9e-11 70.5 59 67.8
Rhsim03G0258200 Rhododendron simsii HOM05D001418 ORTHO05D002038 6.9e-11 70.5 59 74.6
TAR383G1049 Trochodendron aralioides HOM05D001418 ORTHO05D002038 9.0e-11 70.1 59 64.4
Hund26112 Selenicereus undatus HOM05D001418 ORTHO05D002038 1.2e-10 69.7 53 69.8
MBI15_g27183_MAGBIO Magnolia biondii HOM05D001418 ORTHO05D002038 3.4e-10 68.2 54 66.7
TAR636G0172 Trochodendron aralioides HOM05D001418 ORTHO05D002038 3.4e-10 68.2 58 69.0
Actinidia23562 Actinidia chinensis HOM05D001418 ORTHO05D002038 5.8e-10 67.4 55 69.1
TWI63G1644 Tripterygium wilfordii HOM05D001418 ORTHO05D002038 5.8e-10 67.4 60 63.3
vmacro06061 Vaccinium macrocarpon HOM05D001418 ORTHO05D002038 1.3e-09 66.2 57 68.4
Hma1.2p1_0028F.1_g017640 Hydrangea macrophylla HOM05D001418 ORTHO05D002038 1.7e-09 65.9 58 62.1
Lj9A719G54 Lonicera japonica HOM05D001418 ORTHO05D002038 2.9e-09 65.1 54 63.0
SalBow1G1788 Salvia bowleyana HOM05D001418 ORTHO05D002038 2.9e-09 65.1 48 70.8
EL10Ac8g18929 Beta vulgaris HOM05D001418 ORTHO05D002038 3.8e-09 64.7 56 67.9
Cpa.g.sc46.175 Carica papaya HOM05D001418 ORTHO05D002038 3.8e-09 64.7 61 59.0
Cc06_g14730 Coffea canephora HOM05D001418 ORTHO05D002038 5.0e-09 64.3 62 59.7
Glyma.02G205500 Glycine max HOM05D001418 ORTHO05D002038 5.0e-09 64.3 60 61.7
QL02p093790 Quercus lobata HOM05D001418 ORTHO05D002038 6.5e-09 63.9 60 60.0
TWI34G1132 Tripterygium wilfordii HOM05D001418 ORTHO05D002038 6.5e-09 63.9 63 57.1
VMungo1215G2966 Vigna mungo HOM05D001418 ORTHO05D002038 6.5e-09 63.9 61 59.0
ClCG05G016210 Citrullus lanatus HOM05D001418 ORTHO05D002038 8.4e-09 63.5 49 75.5
Migut.J01373 Erythranthe guttata HOM05D001418 ORTHO05D002038 8.4e-09 63.5 53 67.9
Phvul.003G154900 Phaseolus vulgaris HOM05D001418 ORTHO05D002038 8.4e-09 63.5 61 60.7
Lj4g0017015 Lotus japonicus HOM05D001418 ORTHO05D002038 1.1e-08 63.2 54 66.7
SGA_v2.0_scaffold45G17021 Striga asiatica HOM05D001418 ORTHO05D002038 1.9e-08 62.4 52 67.3
MELO3C016952.2 Cucumis melo HOM05D001418 ORTHO05D002038 2.5e-08 62.0 48 75.0
CsaV3_4G036460 Cucumis sativus L. HOM05D001418 ORTHO05D002038 2.5e-08 62.0 48 75.0
MSTRG.26264 Avicennia marina HOM05D001418 ORTHO05D002038 3.2e-08 61.6 52 63.5
Glyma.17G072500 Glycine max HOM05D001418 ORTHO05D002038 3.2e-08 61.6 61 59.0
A02p08140 Brassica napus HOM05D001418 ORTHO05D002038 4.2e-08 61.2 54 63.0
DCAR_019406 Daucus carota HOM05D001418 ORTHO05D002038 4.2e-08 61.2 49 61.2
Migut.K00310 Erythranthe guttata HOM05D001418 ORTHO05D002038 4.2e-08 61.2 52 59.6
SGA_v2.0_scaffold265G46091 Striga asiatica HOM05D001418 ORTHO05D002038 4.2e-08 61.2 52 65.4
THA.LOC104817820 Tarenaya hassleriana HOM05D001418 ORTHO05D002038 4.2e-08 61.2 58 63.8
Thhalv10012738m.g Eutrema salsugineum HOM05D001418 ORTHO05D002038 5.5e-08 60.8 54 64.8
Solyc07g005810.3 Solanum lycopersicum HOM05D001418 ORTHO05D002038 5.5e-08 60.8 56 62.5
Sopen07g001910 Solanum pennellii HOM05D001418 ORTHO05D002038 5.5e-08 60.8 56 62.5
PGSC0003DMG400011196 Solanum tuberosum HOM05D001418 ORTHO05D002038 5.5e-08 60.8 56 62.5
ATR0680G013 Amborella trichopoda HOM05D001418 ORTHO05D002038 7.1e-08 60.5 57 57.9
Atru.chr7.2555 Acer truncatum HOM05D001418 ORTHO05D002038 9.3e-08 60.1 49 67.3
AL8G33920 Arabidopsis lyrata HOM05D001418 ORTHO05D002038 1.2e-07 59.7 54 63.0
AT5G57870 Arabidopsis thaliana HOM05D001418 ORTHO05D002038 1.2e-07 59.7 54 63.0
BraA02t05888Z Brassica rapa HOM05D001418 ORTHO05D002038 1.2e-07 59.7 54 61.1
Carub.0008s1840 Capsella rubella HOM05D001418 ORTHO05D002038 1.2e-07 59.7 54 63.0
Sp6g19560 Schrenkiella parvula HOM05D001418 ORTHO05D002038 1.2e-07 59.7 54 63.0
Actinidia38665 Actinidia chinensis HOM05D001418 ORTHO05D002038 2.1e-07 58.9 55 63.6
Actinidia38314 Actinidia chinensis HOM05D001418 ORTHO05D002038 2.7e-07 58.5 53 62.3
BcaB05g22380 Brassica carinata HOM05D001418 ORTHO05D002038 3.5e-07 58.2 54 61.1
C02p13790 Brassica napus HOM05D001418 ORTHO05D002038 3.5e-07 58.2 54 61.1
BolC2t07498H Brassica oleracea HOM05D001418 ORTHO05D002038 3.5e-07 58.2 54 61.1
Oeu052214.1 Olea europaea HOM05D001418 ORTHO05D049459 3.5e-07 58.2 57 61.4
CARHR271610 Cardamine hirsuta HOM05D001418 ORTHO05D002038 4.6e-07 57.8 54 61.1
TPR.G24856 Trifolium pratense HOM05D001418 ORTHO05D002038 4.6e-07 57.8 63 55.6
Cfa020805 Carpinus fangiana HOM05D001418 ORTHO05D002038 6.1e-07 57.4 62 58.1
CiPaw.16G107800 Carya illinoinensis HOM05D001418 ORTHO05D002038 6.1e-07 57.4 58 56.9
Lsat_1_v5_gn_7_50141 Lactuca sativa HOM05D001418 ORTHO05D002038 6.1e-07 57.4 48 70.8
MD02G1006000 Malus domestica HOM05D001418 ORTHO05D002038 6.1e-07 57.4 68 54.4
MD15G1150600 Malus domestica HOM05D001418 ORTHO05D002038 7.9e-07 57.0 71 50.7
Manes.06G033200 Manihot esculenta HOM05D001418 ORTHO05D002038 7.9e-07 57.0 54 61.1
CiPaw.15G166100 Carya illinoinensis HOM05D001418 ORTHO05D002038 1.0e-06 56.6 59 59.3
Haze_19162 Corylus avellana HOM05D001418 ORTHO05D002038 1.0e-06 56.6 62 58.1
Duzib150G1143 Durio zibethinus HOM05D001418 ORTHO05D002038 1.0e-06 56.6 59 59.3
Solyc12g009960.2 Solanum lycopersicum HOM05D001418 ORTHO05D002038 1.0e-06 56.6 56 58.9
Sopen12g004830 Solanum pennellii HOM05D001418 ORTHO05D002038 1.0e-06 56.6 56 58.9
CAN.G551.48 Capsicum annuum HOM05D001418 ORTHO05D002038 1.3e-06 56.2 58 56.9
Gohir.A05G008800 Gossypium hirsutum HOM05D001418 ORTHO05D002038 1.3e-06 56.2 59 57.6
Gorai.013G105700 Gossypium raimondii HOM05D001418 ORTHO05D002038 1.3e-06 56.2 59 55.9
TWI32G0015 Tripterygium wilfordii HOM05D001418 ORTHO05D002038 1.3e-06 56.2 63 50.8
unitig_0.g560 Utricularia gibba HOM05D001418 ORTHO05D002038 1.3e-06 56.2 53 58.5
Gohir.A02G105904 Gossypium hirsutum HOM05D001418 ORTHO05D002038 1.8e-06 55.8 59 55.9
Potri.018G104100 Populus trichocarpa HOM05D001418 ORTHO05D002038 1.8e-06 55.8 51 62.7
RcHm_v2.0_Chr2g0085441 Rosa chinensis HOM05D001418 ORTHO05D002038 1.8e-06 55.8 61 60.7
Rhsim01G0027600 Rhododendron simsii HOM05D001418 ORTHO05D002038 2.3e-06 55.5 58 63.8
Sed0026059 Sechium edule HOM05D001418 ORTHO05D002038 2.3e-06 55.5 48 64.6
PGSC0003DMG400007907 Solanum tuberosum HOM05D001418 ORTHO05D002038 2.3e-06 55.5 56 57.1
Nitab4.5_0008875g0040 Nicotiana tabacum HOM05D001418 ORTHO05D002038 3.0e-06 55.1 49 63.3
Peaxi162Scf00401g00035 Petunia axillaris HOM05D001418 ORTHO05D002038 3.0e-06 55.1 49 65.3
arahy.Tifrunner.gnm1.ann1.HA3262 Arachis hypogaea HOM05D001418 ORTHO05D002038 3.9e-06 54.7 65 53.8
arahy.Tifrunner.gnm1.ann1.R0PHQE Arachis hypogaea HOM05D001418 ORTHO05D002038 3.9e-06 54.7 65 53.8
CSS0026376 Camellia sinensis var. sinensis HOM05D001418 ORTHO05D002038 3.9e-06 54.7 49 71.4
CSS0031979 Camellia sinensis var. sinensis HOM05D001418 ORTHO05D002038 3.9e-06 54.7 49 71.4
PSO063G5273 Papaver somniferum HOM05D001418 ORTHO05D002038 3.9e-06 54.7 57 59.6
Prupe.7G265100 Prunus persica HOM05D001418 ORTHO05D002038 5.1e-06 54.3 66 54.5
CANSAT11G0739 Cannabis sativa HOM05D001418 ORTHO05D002038 6.7e-06 53.9 62 53.2
Gohir.D03G064800 Gossypium hirsutum HOM05D001418 ORTHO05D002038 6.7e-06 53.9 59 54.2
Peaxi162Scf00062g00128 Petunia axillaris HOM05D001418 ORTHO05D002038 6.7e-06 53.9 45 71.1
QL02p018712 Quercus lobata HOM05D001418 ORTHO05D002038 8.7e-06 53.5 45 73.3
THA.LOC104813539 Tarenaya hassleriana HOM05D001418 ORTHO05D002038 8.7e-06 53.5 57 59.6


User provided reference genes

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