Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.7e-70 269.2 140 100.0
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 6.0e-55 217.6 145 80.0
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 4.1e-48 194.9 139 68.3
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.0e-46 190.3 142 67.6
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.9e-45 186.0 118 76.3
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 5.8e-42 174.5 138 62.3
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 7.6e-42 174.1 153 57.5
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 9.9e-42 173.7 133 64.7
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 9.9e-42 173.7 140 59.3
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 2.9e-41 172.2 141 61.7
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.9e-41 172.2 141 61.7
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.9e-41 172.2 141 61.7
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 1.1e-40 170.2 140 58.6
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 3.2e-40 168.7 147 55.8
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 1.6e-39 166.4 140 56.4
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 3.5e-39 165.2 140 55.7
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 4.6e-39 164.9 141 59.6
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 6.0e-39 164.5 139 58.3
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.3e-38 163.3 121 62.0
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 1.3e-38 163.3 141 58.9
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 2.3e-38 162.5 141 57.4
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 3.9e-38 161.8 141 58.2
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 8.7e-38 160.6 102 77.5
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 8.7e-38 160.6 134 61.9
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 1.5e-37 159.8 141 56.0
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 2.5e-37 159.1 141 55.3
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 3.3e-37 158.7 123 56.1
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 3.3e-37 158.7 142 56.3
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 3.3e-37 158.7 141 56.0
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 3.3e-37 158.7 140 57.9
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 5.6e-37 157.9 142 56.3
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 5.6e-37 157.9 144 60.4
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 9.6e-37 157.1 123 55.3
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 9.6e-37 157.1 146 56.2
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.3e-36 156.8 129 62.8
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.6e-36 156.4 142 55.6
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.6e-36 156.4 152 53.9
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 2.8e-36 155.6 140 54.3
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 3.6e-36 155.2 153 49.7
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 3.6e-36 155.2 124 56.5
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 4.8e-36 154.8 116 59.5
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 8.1e-36 154.1 137 53.3
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 8.1e-36 154.1 137 53.3
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 4.0e-35 151.8 130 56.9
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.2e-34 150.2 138 61.6
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 1.2e-34 150.2 125 54.4
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 1.5e-34 149.8 139 54.0
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 1.5e-34 149.8 116 56.9
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 6.4e-33 144.4 144 54.9
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 8.4e-33 144.1 145 53.8
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 8.4e-33 144.1 117 58.1
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 4.2e-32 141.7 105 65.7
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 7.1e-32 141.0 141 59.6
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 2.7e-31 139.0 139 51.8
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 4.6e-31 138.3 139 51.1
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 3.9e-30 135.2 138 52.2
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 6.7e-30 134.4 121 53.7
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 8.7e-30 134.0 143 49.0
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 1.9e-29 132.9 145 48.3
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 1.9e-29 132.9 139 48.9
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 4.3e-29 131.7 139 48.2
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 5.6e-29 131.3 105 58.1
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.3e-28 130.2 139 48.2
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 2.1e-28 129.4 145 48.3
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.1e-28 129.4 145 47.6
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 2.1e-28 129.4 141 48.9
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 3.6e-28 128.6 145 47.6
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 3.6e-28 128.6 118 53.4
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 6.2e-28 127.9 144 46.5
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.4e-27 126.7 118 52.5
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 1.8e-27 126.3 145 46.9
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 1.8e-27 126.3 122 52.5
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.4e-27 125.9 155 47.1
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.4e-27 125.9 155 47.1
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 5.3e-27 124.8 132 53.0
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 2.0e-26 122.9 146 47.3
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 2.6e-26 122.5 146 47.3
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 7.6e-26 120.9 98 58.2
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 9.9e-26 120.6 146 47.3
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 9.9e-26 120.6 122 52.5
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 9.9e-26 120.6 144 45.8
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 2.9e-25 119.0 146 46.6
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.1e-24 117.1 99 64.6
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 3.2e-24 115.5 136 47.1
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 4.2e-24 115.2 141 48.2
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 2.1e-23 112.8 136 46.3
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.7e-23 112.5 102 55.9
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 6.0e-23 111.3 124 46.8
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 1.6e-20 103.2 114 47.4
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 1.6e-20 103.2 139 43.2
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 8.1e-20 100.9 133 42.9
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 3.1e-19 99.0 136 44.9
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 3.1e-19 99.0 94 50.0
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 2.6e-18 95.9 95 52.6
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 2.6e-18 95.9 118 45.8
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.0e-17 94.0 122 45.9
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 2.2e-17 92.8 137 40.1
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 4.9e-17 91.7 67 59.7
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 4.9e-17 91.7 137 39.4
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 8.4e-17 90.9 101 48.5
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 1.4e-16 90.1 149 38.9
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 5.5e-16 88.2 122 43.4
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.6e-15 86.7 101 46.5
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 1.8e-14 83.2 109 44.0
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 5.1e-14 81.6 62 64.5
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 6.7e-14 81.3 69 58.0
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 4.3e-13 78.6 123 37.4
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 2.9e-09 65.9 114 33.3
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 5.1e-06 55.1 104 39.4


User provided reference genes

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