Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0096 Trochodendron aralioides HOM05D003627 ORTHO05D004307 3.5e-115 418.3 213 100.0
TAR626G0665 Trochodendron aralioides HOM05D003627 ORTHO05D004307 5.0e-45 185.3 100 92.0
Nn2g11929 Nelumbo nucifera HOM05D003627 ORTHO05D004307 1.5e-44 183.7 100 89.0
Nn8g39358 Nelumbo nucifera HOM05D003627 ORTHO05D004307 1.5e-44 183.7 118 78.8
TAR636G0318 Trochodendron aralioides HOM05D003627 ORTHO05D004307 1.6e-43 180.3 100 88.0
Atru.chr7.2370 Acer truncatum HOM05D003627 ORTHO05D004307 1.8e-42 176.8 101 86.1
Ciclev10009887m.g Citrus clementina HOM05D003627 ORTHO05D004307 3.0e-42 176.0 104 83.7
Manes.03G017600 Manihot esculenta HOM05D003627 ORTHO05D004307 6.8e-42 174.9 101 84.2
MBI01_g13086_MAGBIO Magnolia biondii HOM05D003627 ORTHO05D004307 3.4e-41 172.6 100 86.0
Dinv11613 Davidia involucrata HOM05D003627 ORTHO05D004307 5.7e-41 171.8 100 84.0
Eucgr.C01792 Eucalyptus grandis HOM05D003627 ORTHO05D004307 5.7e-41 171.8 101 84.2
Manes.16G119000 Manihot esculenta HOM05D003627 ORTHO05D004307 5.7e-41 171.8 101 83.2
CiPaw.07G220400 Carya illinoinensis HOM05D003627 ORTHO05D004307 7.5e-41 171.4 101 82.2
RcHm_v2.0_Chr6g0298671 Rosa chinensis HOM05D003627 ORTHO05D004307 7.5e-41 171.4 101 84.2
Cfa013184 Carpinus fangiana HOM05D003627 ORTHO05D004307 1.3e-40 170.6 101 81.2
Eucgr.C02813 Eucalyptus grandis HOM05D003627 ORTHO05D004307 1.3e-40 170.6 101 84.2
CDE10G0654 Ceratophyllum demersum HOM05D003627 ORTHO05D004307 2.8e-40 169.5 100 81.0
Sabra06G0195600 Salix brachista HOM05D003627 ORTHO05D004307 2.8e-40 169.5 101 83.2
ClCG05G017090 Citrullus lanatus HOM05D003627 ORTHO05D004307 4.8e-40 168.7 101 79.2
Duzib168G1482 Durio zibethinus HOM05D003627 ORTHO05D004307 4.8e-40 168.7 101 83.2
Potri.018G031400 Populus trichocarpa HOM05D003627 ORTHO05D004307 4.8e-40 168.7 101 82.2
Sabra18G0032500 Salix brachista HOM05D003627 ORTHO05D004307 4.8e-40 168.7 101 79.2
Sed0001403 Sechium edule HOM05D003627 ORTHO05D004307 4.8e-40 168.7 101 80.2
FvH4_2g29690 Fragaria vesca HOM05D003627 ORTHO05D004307 6.3e-40 168.3 101 81.2
FAN15G2106 Fragaria x ananassa HOM05D003627 ORTHO05D004307 6.3e-40 168.3 101 81.2
FAN24G2732 Fragaria x ananassa HOM05D003627 ORTHO05D004307 6.3e-40 168.3 101 81.2
Potri.006G250000 Populus trichocarpa HOM05D003627 ORTHO05D004307 6.3e-40 168.3 101 81.2
Sed0003789 Sechium edule HOM05D003627 ORTHO05D004307 6.3e-40 168.3 101 80.2
ATR0737G081 Amborella trichopoda HOM05D003627 ORTHO05D004307 8.3e-40 167.9 102 82.4
CDE10G0960 Ceratophyllum demersum HOM05D003627 ORTHO05D004307 8.3e-40 167.9 100 80.0
Duzib150G1042 Durio zibethinus HOM05D003627 ORTHO05D004307 8.3e-40 167.9 101 79.2
FAN20G0596 Fragaria x ananassa HOM05D003627 ORTHO05D004307 1.4e-39 167.2 101 80.2
FAN27G2400 Fragaria x ananassa HOM05D003627 ORTHO05D004307 1.4e-39 167.2 101 80.2
Gohir.A02G112400 Gossypium hirsutum HOM05D003627 ORTHO05D004307 1.4e-39 167.2 101 81.2
Actinidia13260 Actinidia chinensis HOM05D003627 ORTHO05D004307 1.8e-39 166.8 108 75.9
Gorai.013G110700 Gossypium raimondii HOM05D003627 ORTHO05D004307 2.4e-39 166.4 101 81.2
Thecc.09G148600 Theobroma cacao HOM05D003627 ORTHO05D004307 2.4e-39 166.4 101 81.2
Cpa.g.sc1755.1 Carica papaya HOM05D003627 ORTHO05D004307 3.1e-39 166.0 101 79.2
Medtr1g011880 Medicago truncatula HOM05D003627 ORTHO05D004307 3.1e-39 166.0 101 78.2
Duzib187G0128 Durio zibethinus HOM05D003627 ORTHO05D004307 5.4e-39 165.2 101 82.2
Glyma.17G208000 Glycine max HOM05D003627 ORTHO05D004307 5.4e-39 165.2 101 77.2
MD08G1143000 Malus domestica HOM05D003627 ORTHO05D004307 5.4e-39 165.2 101 79.2
GSVIVG01035802001 Vitis vinifera HOM05D003627 ORTHO05D004307 5.4e-39 165.2 101 80.2
Prupe.1G472700 Prunus persica HOM05D003627 ORTHO05D004307 9.1e-39 164.5 101 80.2
PGR044G1161 Punica granatum HOM05D003627 ORTHO05D004307 9.1e-39 164.5 101 77.2
VMungo0647G0605 Vigna mungo HOM05D003627 ORTHO05D004307 9.1e-39 164.5 101 78.2
Carub.0006s2330 Capsella rubella HOM05D003627 ORTHO05D004307 1.2e-38 164.1 101 80.2
CsaV3_3G046570 Cucumis sativus L. HOM05D003627 ORTHO05D004307 1.6e-38 163.7 101 77.2
Psat6g030080 Pisum sativum HOM05D003627 ORTHO05D004307 1.6e-38 163.7 101 76.2
CSS0039202 Camellia sinensis var. sinensis HOM05D003627 ORTHO05D004307 2.0e-38 163.3 100 78.0
Dinv30181 Davidia involucrata HOM05D003627 ORTHO05D004307 2.0e-38 163.3 103 78.6
PGR044G1771 Punica granatum HOM05D003627 ORTHO05D004307 2.0e-38 163.3 101 77.2
Actinidia14624 Actinidia chinensis HOM05D003627 ORTHO05D004307 2.7e-38 162.9 98 79.6
Gohir.A13G206900 Gossypium hirsutum HOM05D003627 ORTHO05D004307 2.7e-38 162.9 101 79.2
Gohir.D13G211500 Gossypium hirsutum HOM05D003627 ORTHO05D004307 2.7e-38 162.9 101 79.2
Gorai.013G241600 Gossypium raimondii HOM05D003627 ORTHO05D004307 2.7e-38 162.9 101 79.2
Actinidia15690 Actinidia chinensis HOM05D003627 ORTHO05D004307 3.5e-38 162.5 100 78.0
Glyma.14G126300 Glycine max HOM05D003627 ORTHO05D004307 3.5e-38 162.5 101 76.2
Lj1g0024003 Lotus japonicus HOM05D003627 ORTHO05D004307 3.5e-38 162.5 101 77.2
CANSAT78G1909 Cannabis sativa HOM05D003627 ORTHO05D004307 5.9e-38 161.8 101 77.2
MELO3C003682.2 Cucumis melo HOM05D003627 ORTHO05D004307 5.9e-38 161.8 101 75.2
Gohir.D03G071300 Gossypium hirsutum HOM05D003627 ORTHO05D004307 5.9e-38 161.8 101 79.2
CiPaw.08G013800 Carya illinoinensis HOM05D003627 ORTHO05D004307 7.7e-38 161.4 101 77.2
Lj7A717G55 Lonicera japonica HOM05D003627 ORTHO05D004307 1.3e-37 160.6 100 79.0
Phvul.001G121500 Phaseolus vulgaris HOM05D003627 ORTHO05D004307 1.3e-37 160.6 101 75.2
QL02p023157 Quercus lobata HOM05D003627 ORTHO05D004307 1.3e-37 160.6 101 76.2
Lsat_1_v5_gn_8_57600 Lactuca sativa HOM05D003627 ORTHO05D004307 1.7e-37 160.2 101 78.2
Lalb_Chr08g0243901 Lupinus albus HOM05D003627 ORTHO05D004307 1.7e-37 160.2 101 73.3
Lalb_Chr23g0268801 Lupinus albus HOM05D003627 ORTHO05D004307 1.7e-37 160.2 101 75.2
Ca_12928_v3 Cicer arietinum L. HOM05D003627 ORTHO05D004307 2.2e-37 159.8 101 73.3
MD15G1119900 Malus domestica HOM05D003627 ORTHO05D004307 2.2e-37 159.8 101 76.2
QL02p087302 Quercus lobata HOM05D003627 ORTHO05D004307 2.2e-37 159.8 99 77.8
AL6G37230 Arabidopsis lyrata HOM05D003627 ORTHO05D004307 6.5e-37 158.3 101 76.2
Lsat_1_v5_gn_5_31481 Lactuca sativa HOM05D003627 ORTHO05D004307 6.5e-37 158.3 100 77.0
CSS0004095 Camellia sinensis var. sinensis HOM05D003627 ORTHO05D004307 8.5e-37 157.9 100 76.0
TPR.G15658 Trifolium pratense HOM05D003627 ORTHO05D004307 8.5e-37 157.9 101 73.3
BcaC03g17902 Brassica carinata HOM05D003627 ORTHO05D004307 1.1e-36 157.5 100 76.0
A02p39740 Brassica napus HOM05D003627 ORTHO05D004307 1.1e-36 157.5 100 76.0
C02p59530 Brassica napus HOM05D003627 ORTHO05D004307 1.1e-36 157.5 100 76.0
BolC2t12016H Brassica oleracea HOM05D003627 ORTHO05D004307 1.1e-36 157.5 100 76.0
BraA02t08939Z Brassica rapa HOM05D003627 ORTHO05D004307 1.1e-36 157.5 100 76.0
BcaB03g12747 Brassica carinata HOM05D003627 ORTHO05D004307 2.5e-36 156.4 101 75.2
Thhalv10005137m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 2.5e-36 156.4 101 76.2
THA.LOC104803827 Tarenaya hassleriana HOM05D003627 ORTHO05D004307 2.5e-36 156.4 101 75.2
AT5G25450 Arabidopsis thaliana HOM05D003627 ORTHO05D004307 3.2e-36 156.0 101 75.2
CAN.G98.17 Capsicum annuum HOM05D003627 ORTHO05D004307 4.2e-36 155.6 102 78.4
AL7G19340 Arabidopsis lyrata HOM05D003627 ORTHO05D004307 5.5e-36 155.2 101 74.3
MSTRG.11762 Avicennia marina HOM05D003627 ORTHO05D004307 5.5e-36 155.2 101 73.3
C03p87330 Brassica napus HOM05D003627 ORTHO05D004307 7.2e-36 154.8 101 74.3
HanXRQChr05g0142301 Helianthus annuus HOM05D003627 ORTHO05D004307 7.2e-36 154.8 100 77.0
Aa31LG2G19380 Aethionema arabicum HOM05D003627 ORTHO05D004307 9.4e-36 154.5 103 73.8
BcaC09g52038 Brassica carinata HOM05D003627 ORTHO05D004307 9.4e-36 154.5 101 74.3
ECA236G1938 Erigeron canadensis HOM05D003627 ORTHO05D004307 9.4e-36 154.5 100 76.0
AT4G32470 Arabidopsis thaliana HOM05D003627 ORTHO05D004307 1.2e-35 154.1 101 73.3
BcaC01g01021 Brassica carinata HOM05D003627 ORTHO05D004307 1.2e-35 154.1 101 74.3
BolC3t21033H Brassica oleracea HOM05D003627 ORTHO05D004307 1.2e-35 154.1 101 74.3
HanXRQChr03g0062131 Helianthus annuus HOM05D003627 ORTHO05D004307 1.2e-35 154.1 100 78.0
Carub.0007s0811 Capsella rubella HOM05D003627 ORTHO05D004307 1.6e-35 153.7 101 73.3
CARHR240390 Cardamine hirsuta HOM05D003627 ORTHO05D004307 1.6e-35 153.7 101 73.3
ECA240G2460 Erigeron canadensis HOM05D003627 ORTHO05D004307 1.6e-35 153.7 100 76.0
Aqoxy7G02033 Aquilegia oxysepala HOM05D003627 ORTHO05D004307 2.1e-35 153.3 101 75.2
HanXRQChr06g0179891 Helianthus annuus HOM05D003627 ORTHO05D004307 2.7e-35 152.9 100 77.0
Solyc08g067020.4 Solanum lycopersicum HOM05D003627 ORTHO05D004307 2.7e-35 152.9 102 77.5
A08p18170 Brassica napus HOM05D003627 ORTHO05D004307 3.6e-35 152.5 101 73.3
BraA08t33770Z Brassica rapa HOM05D003627 ORTHO05D004307 3.6e-35 152.5 101 73.3
Oeu045199.1 Olea europaea HOM05D003627 ORTHO05D004307 3.6e-35 152.5 100 75.0
Thhalv10023759m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 4.7e-35 152.1 101 72.3
Sopen08g020960 Solanum pennellii HOM05D003627 ORTHO05D004307 6.1e-35 151.8 102 76.5
Migut.A00309 Erythranthe guttata HOM05D003627 ORTHO05D004307 8.0e-35 151.4 102 76.5
Hma1.2p1_0000F.1_g000840 Hydrangea macrophylla HOM05D003627 ORTHO05D004307 8.0e-35 151.4 102 75.5
Lsat_1_v5_gn_7_42641 Lactuca sativa HOM05D003627 ORTHO05D004307 8.0e-35 151.4 100 73.0
Sp7g30260 Schrenkiella parvula HOM05D003627 ORTHO05D004307 8.0e-35 151.4 101 72.3
PGSC0003DMG400029087 Solanum tuberosum HOM05D003627 ORTHO05D004307 8.0e-35 151.4 102 76.5
Migut.E01481 Erythranthe guttata HOM05D003627 ORTHO05D004307 1.4e-34 150.6 99 74.7
Hund03017 Selenicereus undatus HOM05D003627 ORTHO05D004307 1.4e-34 150.6 99 75.8
Sc06g0000590 Simmondsia chinensis HOM05D003627 ORTHO05D004307 1.4e-34 150.6 101 75.2
CARHR115730 Cardamine hirsuta HOM05D003627 ORTHO05D004307 1.8e-34 150.2 101 71.3
arahy.Tifrunner.gnm1.ann1.J127JW Arachis hypogaea HOM05D003627 ORTHO05D004307 3.0e-34 149.4 136 58.1
MSTRG.13989 Avicennia marina HOM05D003627 ORTHO05D004307 4.0e-34 149.1 102 73.5
Oeu031576.1 Olea europaea HOM05D003627 ORTHO05D004307 4.0e-34 149.1 100 75.0
SalBow4G0188 Salvia bowleyana HOM05D003627 ORTHO05D004307 4.0e-34 149.1 100 72.0
Sp4g05010 Schrenkiella parvula HOM05D003627 ORTHO05D004307 4.0e-34 149.1 101 71.3
Nitab4.5_0006827g0010 Nicotiana tabacum HOM05D003627 ORTHO05D004307 6.8e-34 148.3 102 75.5
Peaxi162Scf00341g00821 Petunia axillaris HOM05D003627 ORTHO05D004307 8.8e-34 147.9 102 74.5
Cc11_g01730 Coffea canephora HOM05D003627 ORTHO05D004307 1.2e-33 147.5 101 72.3
COL.COLO4_23986 Corchorus olitorius HOM05D003627 ORTHO05D004307 1.2e-33 147.5 101 73.3
Thhalv10026575m.g Eutrema salsugineum HOM05D003627 ORTHO05D004307 1.2e-33 147.5 101 69.3
PSO170G3425 Papaver somniferum HOM05D003627 ORTHO05D004307 1.5e-33 147.1 100 71.0
PSO455G0147 Papaver somniferum HOM05D003627 ORTHO05D004307 1.5e-33 147.1 100 71.0
AUR62024869 Chenopodium quinoa HOM05D003627 ORTHO05D004307 5.7e-33 145.2 100 73.0
A01p05900 Brassica napus HOM05D003627 ORTHO05D004307 9.8e-33 144.4 101 68.3
BraA01t00557Z Brassica rapa HOM05D003627 ORTHO05D004307 9.8e-33 144.4 101 68.3
HPP92_001612 Vanilla planifolia HOM05D003627 ORTHO05D004307 1.3e-32 144.1 101 70.3
C01p06520 Brassica napus HOM05D003627 ORTHO05D004307 2.8e-32 142.9 101 68.3
BolC1t00646H Brassica oleracea HOM05D003627 ORTHO05D004307 2.8e-32 142.9 101 68.3
SGA_v2.0_scaffold169G38619 Striga asiatica HOM05D003627 ORTHO05D004307 2.8e-32 142.9 120 62.5
HPP92_000819 Vanilla planifolia HOM05D003627 ORTHO05D004307 4.9e-32 142.1 93 75.3
Zm00001eb094460 Zea mays HOM05D003627 ORTHO05D004307 4.9e-32 142.1 94 72.3
Gohir.1Z049369 Gossypium hirsutum HOM05D003627 ORTHO05D004307 1.4e-31 140.6 101 71.3
Peaxi162Scf00361g00612 Petunia axillaris HOM05D003627 ORTHO05D004307 1.4e-31 140.6 100 69.0
unitig_748.g8200 Utricularia gibba HOM05D003627 ORTHO05D004307 1.8e-31 140.2 93 72.0
arahy.Tifrunner.gnm1.ann1.8QVL0P Arachis hypogaea HOM05D003627 ORTHO05D004307 2.4e-31 139.8 83 78.3
Os07g0205000 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 3.1e-31 139.4 101 67.3
Zm00001eb212550 Zea mays HOM05D003627 ORTHO05D004307 3.1e-31 139.4 101 68.3
Os03g0806900 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 5.4e-31 138.7 101 67.3
Haze_21577 Corylus avellana HOM05D003627 ORTHO05D004307 7.0e-31 138.3 84 78.6
unitig_32.g10929 Utricularia gibba HOM05D003627 ORTHO05D004307 1.2e-30 137.5 93 69.9
Zm00001eb061560 Zea mays HOM05D003627 ORTHO05D004307 2.0e-30 136.7 92 72.8
Rhsim02G0194100 Rhododendron simsii HOM05D003627 ORTHO05D004307 3.5e-30 136.0 85 75.3
Nn1g01248 Nelumbo nucifera HOM05D001793 ORTHO05D001938 3.8e-29 132.5 89 71.9
DCAR_003029 Daucus carota HOM05D003627 ORTHO05D004307 5.0e-29 132.1 100 64.0
SGA_v2.0_scaffold18G08283 Striga asiatica HOM05D003627 ORTHO05D004307 9.5e-28 127.9 84 73.8
vmacro05197 Vaccinium macrocarpon HOM05D003627 ORTHO05D004307 1.2e-27 127.5 88 67.0
SGA_v2.0_scaffold22G09938 Striga asiatica HOM05D003627 ORTHO05D004307 2.8e-27 126.3 83 73.5
SEGI_30503 Sequoiadendron giganteum HOM05D003627 ORTHO05D004307 4.7e-27 125.6 105 59.0
TWI32G0136 Tripterygium wilfordii HOM05D003627 ORTHO05D004307 4.7e-27 125.6 84 73.8
TWI34G0954 Tripterygium wilfordii HOM05D003627 ORTHO05D004307 1.0e-26 124.4 84 71.4
Oeu030075.1 Olea europaea HOM05D003627 ORTHO05D004307 1.8e-26 123.6 83 73.5
Ah.10g026040 Amaranthus hybridus HOM05D003627 ORTHO05D004307 4.0e-26 122.5 85 68.2
Ah.10g026070 Amaranthus hybridus HOM05D003627 ORTHO05D004307 5.2e-26 122.1 86 67.4
MBI04_g38347_MAGBIO Magnolia biondii HOM05D003627 ORTHO05D004307 2.6e-25 119.8 73 80.8
Sc09g0008620 Simmondsia chinensis HOM05D003627 ORTHO05D004307 2.6e-25 119.8 72 81.9
Mapoly0020s0108 Marchantia polymorpha HOM05D003627 ORTHO05D004307 7.5e-25 118.2 98 59.2
SalBow8G5246 Salvia bowleyana HOM05D003627 ORTHO05D004307 7.5e-25 118.2 85 68.2
SalBow8G5369 Salvia bowleyana HOM05D003627 ORTHO05D004307 7.5e-25 118.2 85 68.2
Pp3c25_1520 Physcomitrium patens HOM05D003627 ORTHO05D004307 1.7e-24 117.1 96 60.4
AagrBONN_evm.TU.Sc2ySwM_344.1095 Anthoceros agrestis HOM05D003627 ORTHO05D004307 3.7e-24 115.9 99 57.6
Pp3c6_18020 Physcomitrium patens HOM05D003627 ORTHO05D004307 8.3e-24 114.8 96 59.4
Nitab4.5_0000010g0100 Nicotiana tabacum HOM05D003627 ORTHO05D004307 4.1e-23 112.5 82 67.1
SMO169G0058 Selaginella moellendorffii HOM05D003627 ORTHO05D004307 1.6e-22 110.5 93 55.9
CBR_g8907 Chara braunii HOM05D003627 ORTHO05D004307 2.7e-22 109.8 96 55.2
Pp3c10_14460 Physcomitrium patens HOM05D003627 ORTHO05D004307 3.0e-21 106.3 94 56.4
Os08g0246400 Oryza sativa ssp. japonica HOM05D003627 ORTHO05D004307 5.0e-21 105.5 86 64.0
HanXRQChr06g0182081 Helianthus annuus HOM05D003627 ORTHO05D004307 2.1e-19 100.1 60 86.7
Cre06.g262700 Chlamydomonas reinhardtii HOM05D003627 ORTHO05D004307 3.4e-17 92.8 98 50.0
MCO05G573 Micromonas commoda HOM05D003627 ORTHO05D004307 1.3e-16 90.9 98 49.0
CAN.G536.8 Capsicum annuum HOM05D003627 ORTHO05D001832 2.2e-16 90.1 64 73.4
PRCOL_00006283 Prasinoderma coloniale HOM05D003627 ORTHO05D004307 2.9e-16 89.7 98 48.0
SGA_v2.0_scaffold399G50806 Striga asiatica HOM05D005821 ORTHO05D006649 8.3e-16 88.2 100 50.0
AUR62030679 Chenopodium quinoa HOM05D003627 ORTHO05D004307 7.0e-15 85.1 83 56.6
CiPaw.03G239400 Carya illinoinensis HOM05D003627 ORTHO05D004307 1.5e-09 67.4 44 65.9
PGR044G2108 Punica granatum HOM05D007797 ORTHO05D009741 1.5e-09 67.4 85 48.2
CAN.G538.10 Capsicum annuum HOM05D003627 ORTHO05D000766 9.8e-09 64.7 43 76.7
PGR102G1585 Punica granatum HOM05D007797 ORTHO05D009741 2.7e-06 56.6 95 41.1
arahy.Tifrunner.gnm1.ann1.DTD3YS Arachis hypogaea HOM05D003627 ORTHO05D010966 7.8e-06 55.1 31 83.9
CARHR187770 Cardamine hirsuta HOM05D003627 ORTHO05D004307 7.8e-06 55.1 49 59.2


User provided reference genes

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