Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0014 Trochodendron aralioides HOM05D008807 ORTHO05D010580 2.9e-41 171.8 107 100.0
Nn5g29649 Nelumbo nucifera HOM05D008807 ORTHO05D010580 2.5e-13 79.0 62 67.7
TAR376G0370 Trochodendron aralioides HOM05D008807 ORTHO05D010580 4.8e-12 74.7 81 56.8
MBI16_g07724_MAGBIO Magnolia biondii HOM05D008807 ORTHO05D010580 2.6e-10 68.9 56 67.9
GSVIVG01009733001 Vitis vinifera HOM05D008807 ORTHO05D010580 3.4e-10 68.6 70 61.4
Potri.002G034300 Populus trichocarpa HOM05D008807 ORTHO05D010580 1.7e-09 66.2 56 58.9
Dinv36101 Davidia involucrata HOM05D010025 ORTHO05D010580 2.9e-09 65.5 55 67.3
Aqoxy6G01147 Aquilegia oxysepala HOM05D008807 ORTHO05D010580 3.8e-09 65.1 70 51.4
Nn1g04939 Nelumbo nucifera HOM05D008807 ORTHO05D010580 3.8e-09 65.1 45 73.3
Manes.18G022900 Manihot esculenta HOM05D008807 ORTHO05D010580 8.4e-09 63.9 56 62.5
Thecc.08G029700 Theobroma cacao HOM05D008807 ORTHO05D010580 8.4e-09 63.9 53 58.5
Potri.005G228800 Populus trichocarpa HOM05D008807 ORTHO05D010580 1.1e-08 63.5 56 57.1
Cpa.g.sc123.50 Carica papaya HOM05D008807 ORTHO05D010580 1.9e-08 62.8 66 47.0
Prupe.1G377200 Prunus persica HOM05D008807 ORTHO05D010580 2.5e-08 62.4 69 50.7
Gohir.A06G009200 Gossypium hirsutum HOM05D008807 ORTHO05D010580 4.2e-08 61.6 53 60.4
Gohir.D06G004700 Gossypium hirsutum HOM05D008807 ORTHO05D010580 4.2e-08 61.6 53 60.4
Gorai.010G009300 Gossypium raimondii HOM05D008807 ORTHO05D010580 4.2e-08 61.6 53 60.4
Dinv39435 Davidia involucrata HOM05D010025 ORTHO05D010580 7.1e-08 60.8 52 65.4
Ciclev10002762m.g Citrus clementina HOM05D008807 ORTHO05D010580 1.6e-07 59.7 71 50.7
Haze_17940 Corylus avellana HOM05D008807 ORTHO05D010580 1.6e-07 59.7 69 53.6
CDE06G2173 Ceratophyllum demersum HOM05D008807 ORTHO05D010580 2.1e-07 59.3 71 52.1
QL02p009078 Quercus lobata HOM05D008807 ORTHO05D010580 6.0e-07 57.8 66 54.5
Sabra05G0176700 Salix brachista HOM05D008807 ORTHO05D010580 2.3e-06 55.8 73 45.2
arahy.Tifrunner.gnm1.ann1.08WRUD Arachis hypogaea HOM05D001173 ORTHO05D010580 3.0e-06 55.5 58 50.0
Cc10_g02650 Coffea canephora HOM05D010025 ORTHO05D013126 3.0e-06 55.5 55 54.5
Manes.05G157800 Manihot esculenta HOM05D008807 ORTHO05D010580 3.0e-06 55.5 53 58.5
MD08G1029300 Malus domestica HOM05D008807 ORTHO05D010580 3.9e-06 55.1 53 54.7
Actinidia22529 Actinidia chinensis HOM05D010025 ORTHO05D013126 5.1e-06 54.7 70 47.1
MD15G1024800 Malus domestica HOM05D008807 ORTHO05D010580 5.1e-06 54.7 62 48.4
arahy.Tifrunner.gnm1.ann1.KF8GDN Arachis hypogaea HOM05D014928 ORTHO05D010580 6.7e-06 54.3 57 50.9
Lj1g0017273 Lotus japonicus HOM05D014928 ORTHO05D010580 8.7e-06 53.9 70 48.6


User provided reference genes

Program Settings