Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.8e-111 405.2 192 100.0
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.9e-52 209.1 190 56.3
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 3.0e-33 146.0 196 45.4
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.8e-30 136.7 208 44.7
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 2.4e-30 136.3 189 47.1
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 1.2e-29 134.0 191 47.1
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 3.5e-29 132.5 179 43.0
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.5e-29 132.1 203 45.8
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.0e-28 131.0 207 44.0
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 1.7e-28 130.2 211 48.3
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.2e-28 129.8 203 45.3
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.9e-27 126.7 193 47.2
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 3.2e-27 125.9 204 44.6
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 3.2e-27 125.9 216 41.2
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 3.2e-27 125.9 193 43.0
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 4.2e-27 125.6 206 46.6
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 4.2e-27 125.6 200 41.0
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 4.2e-27 125.6 199 41.7
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 9.4e-27 124.4 193 44.0
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 1.6e-26 123.6 209 38.8
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.7e-26 122.9 189 40.2
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 4.7e-26 122.1 191 39.3
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 4.7e-26 122.1 205 44.9
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 8.0e-26 121.3 201 42.3
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 1.0e-25 120.9 203 42.4
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.4e-25 120.6 190 43.2
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.3e-25 119.8 190 43.2
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.0e-25 119.4 184 40.8
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 6.8e-25 118.2 202 38.1
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 8.8e-25 117.9 203 41.4
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 8.8e-25 117.9 189 41.3
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.5e-24 117.1 193 42.0
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 3.4e-24 115.9 189 39.7
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 7.5e-24 114.8 212 38.2
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 7.5e-24 114.8 197 39.1
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 7.5e-24 114.8 194 43.3
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 9.8e-24 114.4 222 33.3
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 2.8e-23 112.8 194 41.8
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 3.7e-23 112.5 199 38.2
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 4.8e-23 112.1 197 39.6
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 4.8e-23 112.1 184 41.8
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 4.8e-23 112.1 188 42.0
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 4.8e-23 112.1 190 41.1
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 6.3e-23 111.7 175 41.7
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 8.3e-23 111.3 202 40.6
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 1.1e-22 110.9 183 35.5
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.4e-22 110.5 185 40.0
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 1.8e-22 110.2 206 37.4
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 2.4e-22 109.8 200 38.0
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 2.4e-22 109.8 180 41.1
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 3.1e-22 109.4 205 42.0
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 3.1e-22 109.4 201 36.8
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.2e-21 107.5 185 38.4
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.0e-21 106.7 194 38.1
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 2.0e-21 106.7 197 38.1
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 2.7e-21 106.3 194 38.7
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.7e-21 106.3 221 34.4
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 3.5e-21 105.9 197 39.1
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 3.5e-21 105.9 191 40.3
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 5.9e-21 105.1 200 37.0
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 7.7e-21 104.8 192 39.6
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 7.7e-21 104.8 192 39.6
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.0e-20 104.4 200 38.0
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.7e-20 103.6 200 38.0
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.3e-20 103.2 200 35.5
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 2.3e-20 103.2 185 40.0
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.9e-20 102.8 189 39.2
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 3.8e-20 102.4 195 33.8
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 3.8e-20 102.4 193 37.8
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 3.8e-20 102.4 193 37.8
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 3.8e-20 102.4 212 34.9
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.8e-20 102.4 188 39.9
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 5.0e-20 102.1 186 39.2
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 6.6e-20 101.7 192 39.6
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 6.6e-20 101.7 192 39.6
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 6.6e-20 101.7 199 37.7
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 6.6e-20 101.7 190 40.5
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 8.6e-20 101.3 197 41.1
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 1.1e-19 100.9 191 38.2
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.5e-19 100.5 198 38.9
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.9e-19 100.1 202 36.1
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.9e-19 100.1 196 38.3
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.5e-19 99.8 201 37.8
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 3.3e-19 99.4 191 38.7
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 5.5e-19 98.6 181 37.6
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.5e-19 98.6 191 35.6
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 7.2e-19 98.2 201 37.8
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 9.5e-19 97.8 183 38.8
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.2e-18 97.4 214 34.1
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 1.2e-18 97.4 201 37.8
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 1.6e-18 97.1 200 37.0
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 1.6e-18 97.1 200 37.0
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.6e-18 97.1 189 37.6
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 2.1e-18 96.7 179 39.7
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 3.6e-18 95.9 192 36.5
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 6.1e-18 95.1 173 38.7
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 1.4e-17 94.0 209 37.3
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.8e-17 93.6 201 33.8
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 1.8e-17 93.6 194 36.6
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.8e-17 93.6 194 36.6
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 3.0e-17 92.8 216 33.8
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 4.0e-17 92.4 179 37.4
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 2.0e-16 90.1 187 35.8
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 2.0e-16 90.1 176 39.2
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 2.0e-16 90.1 191 36.6
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 5.7e-16 88.6 200 32.0
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 5.7e-16 88.6 218 29.8
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 6.3e-15 85.1 101 48.5
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 1.1e-14 84.3 180 35.6
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.8e-14 83.6 193 34.7
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 1.8e-14 83.6 199 34.7
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.8e-14 83.6 173 38.2
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 2.4e-14 83.2 182 36.8
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 7.0e-14 81.6 181 36.5
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.7e-13 79.7 190 35.3
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 3.5e-13 79.3 186 34.9
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 5.0e-12 75.5 184 32.1
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 4.3e-11 72.4 187 35.3
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 6.1e-10 68.6 182 31.9
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 2.3e-09 66.6 199 30.2
Aqoxy7G00993 Aquilegia oxysepala HOM05D005897 ORTHO05D007128 3.1e-09 66.2 207 30.0
PSO386G0064 Papaver somniferum HOM05D005897 ORTHO05D007128 3.1e-09 66.2 206 31.1
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 5.2e-09 65.5 198 32.8
MBI19_g18108_MAGBIO Magnolia biondii HOM05D005897 ORTHO05D007128 4.4e-08 62.4 215 31.2
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.3e-07 60.8 119 38.7
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 2.2e-07 60.1 187 31.6
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 2.9e-07 59.7 186 29.0
Zm00001eb313970 Zea mays HOM05D041184 ORTHO05D037194 2.9e-07 59.7 219 33.3
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 1.9e-06 57.0 42 61.9
DCAR_011924 Daucus carota HOM05D005897 ORTHO05D007128 3.2e-06 56.2 164 29.9
HPP92_009417 Vanilla planifolia HOM05D005897 ORTHO05D007128 4.1e-06 55.8 174 30.5
HPP92_004170 Vanilla planifolia HOM05D005897 ORTHO05D007128 9.2e-06 54.7 79 40.5


User provided reference genes

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