Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 1.2e-106 389.8 197 100.0
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 8.3e-87 323.9 197 81.2
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 7.3e-75 284.3 194 71.6
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 3.6e-74 282.0 197 74.6
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 2.0e-72 276.2 166 78.3
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 3.8e-71 271.9 198 68.7
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 4.2e-70 268.5 182 73.6
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 9.3e-70 267.3 192 69.8
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 9.3e-70 267.3 208 63.9
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 1.2e-69 266.9 205 64.4
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 4.6e-69 265.0 186 70.4
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 6.0e-69 264.6 208 63.0
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 1.3e-68 263.5 208 64.9
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 3.0e-68 262.3 208 64.4
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 1.1e-67 260.4 197 65.0
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 1.9e-67 259.6 202 65.3
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 5.6e-67 258.1 207 63.3
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 5.6e-67 258.1 186 67.7
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 1.6e-66 256.5 186 68.8
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 2.4e-65 252.7 205 63.4
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 4.0e-65 251.9 188 67.0
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 5.3e-65 251.5 190 66.3
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.5e-64 250.0 205 62.0
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 2.6e-64 249.2 188 66.5
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 3.4e-64 248.8 155 73.5
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 4.4e-64 248.4 188 64.4
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 7.6e-64 247.7 185 68.1
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 1.7e-63 246.5 205 61.5
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 1.7e-63 246.5 196 61.7
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 2.2e-63 246.1 209 61.7
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 1.1e-62 243.8 190 62.6
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 2.4e-62 242.7 155 74.2
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 3.2e-62 242.3 155 74.8
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 3.2e-62 242.3 183 67.8
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 3.2e-62 242.3 190 63.7
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 4.2e-62 241.9 196 62.2
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 9.3e-62 240.7 194 63.4
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 2.7e-61 239.2 155 72.9
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 2.7e-61 239.2 155 73.5
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 2.3e-60 236.1 200 60.5
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 4.3e-59 231.9 160 68.8
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 4.3e-59 231.9 186 60.2
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 4.3e-59 231.9 216 55.1
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 5.6e-59 231.5 200 57.5
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 5.6e-59 231.5 170 66.5
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 1.6e-58 229.9 203 58.1
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 2.1e-58 229.6 205 60.5
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 6.2e-58 228.0 205 59.0
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.1e-57 227.3 203 58.1
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.1e-57 227.3 203 58.1
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 2.4e-57 226.1 203 57.6
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 4.0e-57 225.3 195 61.0
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 1.5e-56 223.4 201 56.2
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 1.5e-56 223.4 196 59.7
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 2.0e-56 223.0 206 57.3
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 2.6e-56 222.6 224 53.1
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 3.4e-56 222.2 205 58.5
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 4.5e-56 221.9 194 57.7
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 5.8e-56 221.5 203 56.7
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.3e-55 220.3 190 60.5
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 3.8e-55 218.8 193 57.0
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.1e-54 217.2 174 63.2
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 2.4e-54 216.1 203 56.7
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 3.2e-54 215.7 185 62.7
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 3.2e-54 215.7 186 55.9
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 1.6e-53 213.4 216 54.2
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 2.7e-53 212.6 197 55.8
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 3.5e-53 212.2 200 56.0
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 7.9e-53 211.1 155 63.2
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 1.0e-52 210.7 162 61.7
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 3.0e-52 209.1 188 57.4
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 6.7e-52 208.0 191 56.0
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 1.9e-51 206.5 187 56.7
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 2.5e-51 206.1 162 61.1
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 9.6e-51 204.1 176 55.7
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 1.3e-50 203.8 191 55.5
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.6e-50 203.4 204 55.4
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 2.1e-50 203.0 151 68.2
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 2.8e-50 202.6 208 54.8
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 4.8e-50 201.8 123 78.0
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 1.1e-49 200.7 175 58.3
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 4.0e-49 198.7 191 52.9
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 6.9e-49 198.0 178 55.6
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 9.0e-49 197.6 192 53.1
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 1.2e-48 197.2 178 55.1
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 7.6e-48 194.5 180 53.3
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 7.6e-48 194.5 180 53.3
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-47 191.8 170 54.7
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 6.5e-47 191.4 191 54.5
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 6.5e-47 191.4 181 50.8
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 9.3e-46 187.6 122 74.6
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 6.7e-44 181.4 164 53.0
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 4.3e-43 178.7 164 51.8
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 1.6e-42 176.8 182 53.3
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 3.8e-39 165.6 124 62.1
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 2.5e-38 162.9 122 68.0
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 7.1e-38 161.4 124 61.3
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 3.0e-36 156.0 178 48.3
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 1.1e-35 154.1 122 61.5
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 5.3e-33 145.2 122 59.0
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 2.0e-32 143.3 157 50.3
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 1.3e-31 140.6 125 60.0
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 5.5e-30 135.2 97 67.0
DCAR_021132 Daucus carota HOM05D000172 ORTHO05D008216 7.9e-29 131.3 112 57.1
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 2.3e-28 129.8 102 62.7
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 3.0e-28 129.4 101 63.4
Aqoxy1G04172 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 8.8e-28 127.9 100 65.0
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 2.5e-27 126.3 132 48.5
CDE07G1564 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 2.2e-26 123.2 122 53.3
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 1.1e-25 120.9 109 53.2
AT1G04985 Arabidopsis thaliana HOM05D000172 ORTHO05D008216 3.1e-25 119.4 128 49.2
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 5.3e-25 118.6 88 65.9
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 2.0e-24 116.7 83 67.5
Haze_12755 Corylus avellana HOM05D000172 ORTHO05D008216 7.7e-24 114.8 141 44.7
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 1.1e-22 110.9 82 65.9
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 1.1e-19 100.9 109 47.7
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 1.5e-19 100.5 141 39.7
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 1.5e-19 100.5 141 39.7
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 2.0e-19 100.1 68 73.5
vmacro12152 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.3e-18 97.4 71 69.0
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 1.7e-18 97.1 87 56.3
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.4e-17 94.0 63 66.7
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 3.6e-13 79.3 135 37.8
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 6.1e-13 78.6 108 42.6
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 2.3e-12 76.6 68 54.4
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 3.9e-12 75.9 68 55.9
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 1.1e-11 74.3 57 63.2
arahy.Tifrunner.gnm1.ann1.XV84RB Arachis hypogaea HOM05D000172 ORTHO05D008216 1.3e-10 70.9 68 51.5
Hund04586 Selenicereus undatus HOM05D035355 ORTHO05D008216 1.1e-09 67.8 141 35.5
Hund04588 Selenicereus undatus HOM05D035355 ORTHO05D008216 1.1e-09 67.8 141 35.5
SHI10091 Sapria himalayana HOM05D000172 ORTHO05D008216 1.7e-07 60.5 62 48.4


User provided reference genes

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