Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 1.9e-71 272.3 130 100.0
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 4.3e-15 85.1 60 68.3
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 9.6e-15 84.0 61 60.7
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 6.2e-14 81.3 53 69.8
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 6.2e-14 81.3 61 57.4
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 1.1e-13 80.5 50 72.0
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 1.1e-13 80.5 51 68.6
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 1.8e-13 79.7 48 68.8
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 1.8e-13 79.7 51 66.7
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 2.4e-13 79.3 58 58.6
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 9.0e-13 77.4 62 54.8
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 9.0e-13 77.4 50 64.0
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 9.0e-13 77.4 56 58.9
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 9.0e-13 77.4 52 65.4
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 9.0e-13 77.4 55 61.8
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 2.0e-12 76.3 57 59.6
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 3.4e-12 75.5 50 68.0
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 3.4e-12 75.5 48 66.7
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 4.4e-12 75.1 62 54.8
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 5.8e-12 74.7 56 57.1
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 7.6e-12 74.3 48 68.8
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.3e-11 73.6 61 55.7
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 1.3e-11 73.6 51 62.7
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 1.3e-11 73.6 48 66.7
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 1.7e-11 73.2 48 68.8
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 1.7e-11 73.2 48 66.7
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 1.7e-11 73.2 60 53.3
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 2.2e-11 72.8 48 68.8
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 3.8e-11 72.0 52 59.6
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 3.8e-11 72.0 50 64.0
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 6.4e-11 71.2 50 62.0
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 6.4e-11 71.2 50 66.0
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 6.4e-11 71.2 50 58.0
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 6.4e-11 71.2 49 63.3
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 6.4e-11 71.2 51 58.8
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 6.4e-11 71.2 51 58.8
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 6.4e-11 71.2 49 61.2
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 8.4e-11 70.9 50 58.0
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 1.1e-10 70.5 50 60.0
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 1.1e-10 70.5 63 54.0
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 1.4e-10 70.1 49 59.2
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 1.9e-10 69.7 52 53.8
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 1.9e-10 69.7 52 53.8
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 1.9e-10 69.7 52 53.8
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 1.9e-10 69.7 49 57.1
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 1.9e-10 69.7 61 57.4
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 2.4e-10 69.3 52 53.8
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 2.4e-10 69.3 52 53.8
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 2.4e-10 69.3 55 54.5
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 2.4e-10 69.3 48 62.5
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 3.2e-10 68.9 50 56.0
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 4.2e-10 68.6 49 61.2
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 4.2e-10 68.6 48 60.4
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 5.4e-10 68.2 50 62.0
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 7.1e-10 67.8 49 61.2
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 7.1e-10 67.8 48 58.3
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 7.1e-10 67.8 48 62.5
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 9.3e-10 67.4 61 47.5
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 2.7e-09 65.9 50 54.0
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 6.0e-09 64.7 50 52.0
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 7.8e-09 64.3 50 52.0
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 1.7e-08 63.2 58 48.3
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 2.3e-08 62.8 58 46.6
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 3.9e-08 62.0 57 52.6
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 3.9e-08 62.0 57 52.6
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 4.3e-07 58.5 50 56.0
FAN12G0891 Fragaria x ananassa HOM05D007940 ORTHO05D010046 7.3e-07 57.8 47 55.3
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 7.3e-07 57.8 47 55.3
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 1.6e-06 56.6 63 46.0
FAN24G2461 Fragaria x ananassa HOM05D000188 ORTHO05D000362 3.6e-06 55.5 47 53.2
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 4.8e-06 55.1 49 55.1


User provided reference genes

Program Settings