Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1258 Trochodendron aralioides HOM05D004642 ORTHO05D005466 8.3e-102 374.4 303 100.0
TAR626G0806 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.4e-53 214.2 303 70.3
Haze_16437 Corylus avellana HOM05D004642 ORTHO05D005466 3.4e-47 193.0 302 49.3
Lalb_Chr14g0373421 Lupinus albus HOM05D004642 ORTHO05D005466 9.6e-42 174.9 301 56.5
QL05p024308 Quercus lobata HOM05D004642 ORTHO05D005466 4.8e-41 172.6 301 46.5
CSS0030593 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 5.8e-39 165.6 299 54.2
Thecc.06G086400 Theobroma cacao HOM05D004642 ORTHO05D005466 1.1e-37 161.4 302 55.6
Actinidia08974 Actinidia chinensis HOM05D004642 ORTHO05D005466 7.1e-37 158.7 301 54.5
Duzib235G0715 Durio zibethinus HOM05D004642 ORTHO05D005466 9.3e-37 158.3 302 50.7
vmacro18915 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 1.2e-36 157.9 264 39.4
Nn2g11790 Nelumbo nucifera HOM05D004642 ORTHO05D005466 5.6e-34 149.1 300 62.7
Prupe.3G071700 Prunus persica HOM05D004642 ORTHO05D005466 2.4e-32 143.7 293 46.4
MD17G1195700 Malus domestica HOM05D004642 ORTHO05D005466 4.2e-29 132.9 299 45.8
Cc04_g03480 Coffea canephora HOM05D004642 ORTHO05D005466 2.7e-28 130.2 341 33.7
MD09G1213800 Malus domestica HOM05D004642 ORTHO05D005466 1.3e-27 127.9 230 54.8
Nn8g39228 Nelumbo nucifera HOM05D004642 ORTHO05D005466 2.3e-27 127.1 300 58.7
Dinv30514 Davidia involucrata HOM05D004642 ORTHO05D005466 3.0e-27 126.7 115 67.0
Cfa002061 Carpinus fangiana HOM05D004642 ORTHO05D005466 3.9e-27 126.3 302 44.0
Aqoxy7G01787 Aquilegia oxysepala HOM05D004642 ORTHO05D005466 1.5e-26 124.4 292 58.9
Potri.001G179600 Populus trichocarpa HOM05D004642 ORTHO05D005466 3.3e-26 123.2 284 45.8
Glyma.11G187500 Glycine max HOM05D004642 ORTHO05D005466 2.8e-25 120.2 323 40.9
Zm00001eb283760 Zea mays HOM05D004642 ORTHO05D005466 2.8e-25 120.2 271 49.1
Rhsim12G0197600 Rhododendron simsii HOM05D004642 ORTHO05D005466 6.3e-25 119.0 301 55.5
AUR62016441 Chenopodium quinoa HOM05D004642 ORTHO05D005466 1.1e-24 118.2 332 34.6
Rhsim08G0221000 Rhododendron simsii HOM05D004642 ORTHO05D005466 1.4e-24 117.9 243 44.4
CiPaw.02G151400 Carya illinoinensis HOM05D004642 ORTHO05D005466 2.0e-23 114.0 305 43.0
Sabra01G0147200 Salix brachista HOM05D004642 ORTHO05D005466 2.6e-23 113.6 96 66.7
Ciclev10025273m.g Citrus clementina HOM05D004642 ORTHO05D005466 1.3e-22 111.3 303 45.5
Nitab4.5_0005851g0030 Nicotiana tabacum HOM05D004642 ORTHO05D005466 2.2e-22 110.5 302 35.1
ATR0037G055 Amborella trichopoda HOM05D004642 ORTHO05D005466 5.0e-22 109.4 114 58.8
CiPaw.01G239700 Carya illinoinensis HOM05D004642 ORTHO05D005466 8.5e-22 108.6 303 45.2
PSO782G0786 Papaver somniferum HOM05D004642 ORTHO05D005466 1.1e-21 108.2 110 53.6
vmacro16950 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 7.2e-21 105.5 101 61.4
PSO063G4770 Papaver somniferum HOM05D004642 ORTHO05D005466 1.2e-20 104.8 110 53.6
MD09G1213300 Malus domestica HOM05D004642 ORTHO05D005466 2.7e-20 103.6 87 67.8
Glyma.11G237600 Glycine max HOM05D004642 ORTHO05D005466 6.1e-20 102.4 278 47.8
unitig_578.g16688 Utricularia gibba HOM05D004642 ORTHO05D005466 1.4e-19 101.3 298 34.2
Sed0016916 Sechium edule HOM05D004642 ORTHO05D005466 5.1e-19 99.4 303 40.6
BcaC09g48580 Brassica carinata HOM05D004642 ORTHO05D005466 8.8e-19 98.6 277 33.6
SGA_v2.0_scaffold37G14818 Striga asiatica HOM05D004642 ORTHO05D005466 1.9e-18 97.4 111 55.0
AUR62011627 Chenopodium quinoa HOM05D004642 ORTHO05D005466 5.7e-18 95.9 332 36.1
Nitab4.5_0000671g0060 Nicotiana tabacum HOM05D004642 ORTHO05D005466 3.7e-17 93.2 267 29.6
Hund06610 Selenicereus undatus HOM05D004642 ORTHO05D005466 8.2e-17 92.0 316 32.3
SEGI_16798 Sequoiadendron giganteum HOM05D004642 ORTHO05D005466 1.8e-16 90.9 284 40.5
Actinidia24760 Actinidia chinensis HOM05D004642 ORTHO05D005466 5.3e-16 89.4 120 41.7
Ah.01g021290 Amaranthus hybridus HOM05D004642 ORTHO05D005466 3.4e-15 86.7 285 30.9
Lj5A61G44 Lonicera japonica HOM05D004642 ORTHO05D005466 1.3e-14 84.7 86 62.8
Phvul.011G092000 Phaseolus vulgaris HOM05D004642 ORTHO05D005466 2.2e-14 84.0 323 38.1
Sc21g0005100 Simmondsia chinensis HOM05D004642 ORTHO05D005466 2.9e-14 83.6 92 59.8
AL776U10010 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 5.0e-14 82.8 94 61.7
TPR.G15588 Trifolium pratense HOM05D004642 ORTHO05D005466 5.0e-14 82.8 95 61.1
CDE07G1358 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 1.9e-13 80.9 262 43.1
Psat7g189080 Pisum sativum HOM05D004642 ORTHO05D005466 2.5e-13 80.5 306 45.8
SalBow2G0306 Salvia bowleyana HOM05D004642 ORTHO05D005466 4.2e-13 79.7 303 36.0
CDE07G0399 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 7.2e-13 79.0 262 28.6
Duzib192G0922 Durio zibethinus HOM05D004642 ORTHO05D005466 1.6e-12 77.8 302 44.4
GSVIVG01017115001 Vitis vinifera HOM05D004642 ORTHO05D005466 1.6e-12 77.8 83 54.2
Ca_19383_v3 Cicer arietinum L. HOM05D004642 ORTHO05D005466 4.7e-12 76.3 305 42.3
Lalb_Chr04g0262651 Lupinus albus HOM05D004642 ORTHO05D005466 2.0e-10 70.9 134 53.0
Cpa.g.sc1188.1 Carica papaya HOM05D004642 ORTHO05D005466 2.6e-10 70.5 299 43.8
Gohir.A05G129515 Gossypium hirsutum HOM05D004642 ORTHO05D005466 5.7e-10 69.3 121 36.4
A03p54580 Brassica napus HOM05D004642 ORTHO05D005466 7.4e-10 68.9 66 62.1
BraA03t14525Z Brassica rapa HOM05D004642 ORTHO05D005466 7.4e-10 68.9 66 62.1
CDE06G0246 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 1.7e-09 67.8 128 36.7
Gorai.009G133100 Gossypium raimondii HOM05D004642 ORTHO05D005466 4.8e-09 66.2 84 44.0
TAR636G1625 Trochodendron aralioides HOM05D004642 ORTHO05D005466 4.8e-09 66.2 59 55.9
Migut.D01034 Erythranthe guttata HOM05D004642 ORTHO05D005466 6.3e-09 65.9 51 72.5
Hma1.2p1_0323F.1_g125210 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 6.3e-09 65.9 64 62.5
Gorai.006G098800 Gossypium raimondii HOM05D004642 ORTHO05D005466 1.4e-08 64.7 84 44.0
unitig_744.g24335 Utricularia gibba HOM05D004642 ORTHO05D005466 1.4e-08 64.7 114 42.1
Thhalv10020153m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 1.8e-08 64.3 84 44.0
Eucgr.F03012 Eucalyptus grandis HOM05D004642 ORTHO05D005466 3.1e-08 63.5 66 57.6
Gohir.D09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 3.1e-08 63.5 84 44.0
HPP92_020045 Vanilla planifolia HOM05D004642 ORTHO05D005466 3.1e-08 63.5 286 47.9
Lsat_1_v5_gn_4_103580 Lactuca sativa HOM05D004642 ORTHO05D005466 4.1e-08 63.2 82 50.0
Solyc03g120230.3 Solanum lycopersicum HOM05D004642 ORTHO05D005466 4.1e-08 63.2 113 38.9
Sopen03g039110 Solanum pennellii HOM05D004642 ORTHO05D005466 4.1e-08 63.2 113 39.8
Aa31LG8G3170 Aethionema arabicum HOM05D004642 ORTHO05D005466 5.3e-08 62.8 84 45.2
A03p39630 Brassica napus HOM05D004642 ORTHO05D005466 7.0e-08 62.4 84 45.2
BraA03t13110Z Brassica rapa HOM05D004642 ORTHO05D005466 7.0e-08 62.4 84 45.2
Gohir.A09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 7.0e-08 62.4 84 42.9
HanXRQChr16g0500971 Helianthus annuus HOM05D004642 ORTHO05D005466 7.0e-08 62.4 89 47.2
AT3G16000 Arabidopsis thaliana HOM05D004642 ORTHO05D005466 9.1e-08 62.0 123 33.3
FvH4_6g31081 Fragaria vesca HOM05D004642 ORTHO05D005466 1.2e-07 61.6 64 59.4
FAN14G2337 Fragaria x ananassa HOM05D004642 ORTHO05D005466 1.2e-07 61.6 64 59.4
Atru.chr1.3266 Acer truncatum HOM05D004642 ORTHO05D005466 2.0e-07 60.8 69 59.4
AL3G28650 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 2.6e-07 60.5 84 40.5
Gohir.D05G129000 Gossypium hirsutum HOM05D004642 ORTHO05D005466 2.6e-07 60.5 84 41.7
PGR102G3321 Punica granatum HOM05D004642 ORTHO05D005466 2.6e-07 60.5 84 39.3
Peaxi162Scf00015g00335 Petunia axillaris HOM05D004642 ORTHO05D005466 3.4e-07 60.1 89 41.6
Dinv38051 Davidia involucrata HOM05D004642 ORTHO05D005466 4.5e-07 59.7 54 68.5
Glyma.12G087100 Glycine max HOM05D004642 ORTHO05D005466 4.5e-07 59.7 321 27.7
Os05g0180400 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 4.5e-07 59.7 58 58.6
ECA248G0988 Erigeron canadensis HOM05D004642 ORTHO05D005466 7.7e-07 58.9 88 48.9
Manes.11G047800 Manihot esculenta HOM05D004642 ORTHO05D005466 7.7e-07 58.9 69 53.6
Oeu033484.1 Olea europaea HOM05D004642 ORTHO05D005466 7.7e-07 58.9 53 62.3
CARHR091130 Cardamine hirsuta HOM05D004642 ORTHO05D005466 1.7e-06 57.8 84 36.9
PGSC0003DMG400002564 Solanum tuberosum HOM05D004642 ORTHO05D005466 1.7e-06 57.8 113 38.9
A01p38100 Brassica napus HOM05D015723 ORTHO05D003275 2.9e-06 57.0 87 42.5
CsaV3_7G033140 Cucumis sativus L. HOM05D004642 ORTHO05D005466 2.9e-06 57.0 69 58.0
FAN09G1651 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.9e-06 57.0 63 60.3
MSTRG.9454 Avicennia marina HOM05D004642 ORTHO05D005466 6.5e-06 55.8 60 55.0


User provided reference genes

Program Settings