Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1233 Trochodendron aralioides HOM05D000344 ORTHO05D005714 1.2e-200 703.0 362 100.0
TAR626G0022 Trochodendron aralioides HOM05D000344 ORTHO05D005714 1.2e-94 350.9 275 71.3
TAR489G0001 Trochodendron aralioides HOM05D000344 ORTHO05D005714 1.2e-78 297.7 275 62.9
Dinv21352 Davidia involucrata HOM05D000344 ORTHO05D005714 5.9e-54 215.7 276 48.2
QL04p071243 Quercus lobata HOM05D000344 ORTHO05D005714 6.5e-53 212.2 281 49.5
GSVIVG01038082001 Vitis vinifera HOM05D000344 ORTHO05D005714 5.5e-52 209.1 281 46.3
Potri.001G394600 Populus trichocarpa HOM05D000344 ORTHO05D005714 1.5e-49 201.1 271 46.5
Dinv26659 Davidia involucrata HOM05D000344 ORTHO05D005714 3.3e-49 199.9 305 45.2
Cfa019445 Carpinus fangiana HOM05D000344 ORTHO05D005714 4.4e-49 199.5 260 49.2
Nn3g20391 Nelumbo nucifera HOM05D000344 ORTHO05D005714 2.4e-47 193.7 275 44.7
Atru.chr2.1804 Acer truncatum HOM05D000344 ORTHO05D005714 4.1e-47 193.0 270 45.9
Haze_08505 Corylus avellana HOM05D000344 ORTHO05D005714 2.0e-46 190.7 260 47.3
Sabra16G0258900 Salix brachista HOM05D000344 ORTHO05D005714 3.2e-44 183.3 271 44.6
CiPaw.12G010800 Carya illinoinensis HOM05D000344 ORTHO05D005714 1.6e-43 181.0 282 44.0
Potri.011G112800 Populus trichocarpa HOM05D000344 ORTHO05D005714 3.9e-42 176.4 271 43.9
Sabra11G0099800 Salix brachista HOM05D000344 ORTHO05D005714 8.8e-42 175.3 272 43.4
Ciclev10019218m.g Citrus clementina HOM05D000344 ORTHO05D005714 2.2e-40 170.6 269 45.0
TWI38G1884 Tripterygium wilfordii HOM05D000344 ORTHO05D005714 2.0e-38 164.1 312 38.8
MBI18_g24477_MAGBIO Magnolia biondii HOM05D000344 ORTHO05D005714 3.5e-38 163.3 299 41.8
Manes.15G101800 Manihot esculenta HOM05D000344 ORTHO05D005714 5.9e-38 162.5 274 42.3
vmacro09446 Vaccinium macrocarpon HOM05D000344 ORTHO05D005714 1.3e-37 161.4 273 39.2
RcHm_v2.0_Chr5g0027541 Rosa chinensis HOM05D000344 ORTHO05D005714 2.2e-37 160.6 267 42.3
Rhsim04G0032900 Rhododendron simsii HOM05D000344 ORTHO05D005714 3.2e-36 156.8 271 39.9
CSS0003213 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D005714 6.1e-35 152.5 275 41.8
Eucgr.F01414 Eucalyptus grandis HOM05D000344 ORTHO05D005714 6.1e-35 152.5 299 39.5
PGR083G1694 Punica granatum HOM05D000344 ORTHO05D005714 1.4e-34 151.4 290 39.3
Hma1.2p1_2826F.1_g329100 Hydrangea macrophylla HOM05D000344 ORTHO05D005714 1.8e-34 151.0 318 37.4
Actinidia18811 Actinidia chinensis HOM05D000344 ORTHO05D005714 2.3e-34 150.6 273 37.7
Manes.03G083600 Manihot esculenta HOM05D000344 ORTHO05D005714 6.7e-34 149.1 270 42.6
Sc07g0003100 Simmondsia chinensis HOM05D000344 ORTHO05D005714 2.0e-33 147.5 273 39.6
Lalb_Chr01g0015991 Lupinus albus HOM05D000344 ORTHO05D005714 5.7e-33 146.0 268 39.2
Actinidia35183 Actinidia chinensis HOM05D000344 ORTHO05D005714 7.5e-33 145.6 274 37.2
Prupe.4G147900 Prunus persica HOM05D000344 ORTHO05D005714 1.1e-31 141.7 387 34.4
ClCG07G010590 Citrullus lanatus HOM05D000344 ORTHO05D005714 3.5e-30 136.7 279 36.6
arahy.Tifrunner.gnm1.ann1.4JR4GS Arachis hypogaea HOM05D000344 ORTHO05D005714 1.0e-29 135.2 269 36.1
Hma1.2p1_2826F.1_g329110 Hydrangea macrophylla HOM05D000344 ORTHO05D005714 1.3e-29 134.8 298 37.2
Glyma.08G175500 Glycine max HOM05D000344 ORTHO05D005714 2.9e-29 133.7 268 38.4
arahy.Tifrunner.gnm1.ann1.YVET13 Arachis hypogaea HOM05D000344 ORTHO05D005714 5.0e-29 132.9 269 36.1
Glyma.15G251100 Glycine max HOM05D000344 ORTHO05D005714 1.1e-28 131.7 269 37.9
Lj3g0014749 Lotus japonicus HOM05D000344 ORTHO05D005714 1.5e-28 131.3 273 38.1
Ca_03461_v3 Cicer arietinum L. HOM05D000753 ORTHO05D005714 1.2e-27 128.3 277 36.1
Phvul.005G052400 Phaseolus vulgaris HOM05D000344 ORTHO05D005714 1.2e-27 128.3 268 37.3
FAN25G1101 Fragaria x ananassa HOM05D000344 ORTHO05D005714 6.1e-27 125.9 260 38.8
Sed0018561 Sechium edule HOM05D000344 ORTHO05D005714 6.1e-27 125.9 302 35.1
FAN21G3159 Fragaria x ananassa HOM05D000753 ORTHO05D005714 8.0e-27 125.6 260 38.8
FAN16G0637 Fragaria x ananassa HOM05D000753 ORTHO05D005714 1.8e-26 124.4 275 38.2
Medtr2g070390 Medicago truncatula HOM05D000344 ORTHO05D005714 4.4e-25 119.8 293 34.8
CsaV3_4G007730 Cucumis sativus L. HOM05D000344 ORTHO05D005714 3.7e-24 116.7 282 33.7
MD05G1209600 Malus domestica HOM05D000344 ORTHO05D005714 3.7e-24 116.7 398 30.9
VMungo1080G1465 Vigna mungo HOM05D000344 ORTHO05D005714 1.1e-23 115.2 269 36.1
AUR62041789 Chenopodium quinoa HOM05D000344 ORTHO05D005714 1.8e-23 114.4 299 31.1
FAN11G0288 Fragaria x ananassa HOM05D000344 ORTHO05D005714 5.4e-23 112.8 260 37.7
Psat1g010800 Pisum sativum HOM05D000344 ORTHO05D005714 9.1e-23 112.1 270 35.2
AUR62037935 Chenopodium quinoa HOM05D000344 ORTHO05D005714 1.2e-22 111.7 299 30.4
FvH4_3g16490 Fragaria vesca HOM05D000344 ORTHO05D005714 2.0e-22 110.9 260 37.3
Thecc.07G147700 Theobroma cacao HOM05D000344 ORTHO05D005714 2.7e-22 110.5 366 31.1
MELO3C016165.2 Cucumis melo HOM05D000344 ORTHO05D005714 4.5e-22 109.8 285 32.6
PSO541G2182 Papaver somniferum HOM05D000344 ORTHO05D005714 7.7e-22 109.0 331 33.2
TPR.G29764 Trifolium pratense HOM05D000344 ORTHO05D005714 7.7e-22 109.0 274 33.6
COL.COLO4_17404 Corchorus olitorius HOM05D000344 ORTHO05D005714 1.3e-21 108.2 336 29.8
Aqoxy4G00022 Aquilegia oxysepala HOM05D000344 ORTHO05D005714 1.9e-20 104.4 288 35.4
CANSAT56G1371 Cannabis sativa HOM05D000344 ORTHO05D005714 2.1e-19 100.9 286 34.3
EL10Ac4g08509 Beta vulgaris HOM05D000344 ORTHO05D005714 3.6e-19 100.1 297 30.3
Duzib187G1053 Durio zibethinus HOM05D000344 ORTHO05D005714 6.1e-19 99.4 357 30.3
Lj1A807T27 Lonicera japonica HOM05D000344 ORTHO05D005714 8.0e-19 99.0 267 32.2
Oeu050688.1 Olea europaea HOM05D000344 ORTHO05D005714 4.0e-18 96.7 309 30.4
Nitab4.5_0009476g0010 Nicotiana tabacum HOM05D000344 ORTHO05D005714 5.2e-18 96.3 295 29.8
Cpa.g.sc77.102 Carica papaya HOM05D000344 ORTHO05D005714 2.6e-17 94.0 228 36.4
CAN.G1003.14 Capsicum annuum HOM05D000344 ORTHO05D005714 2.8e-16 90.5 303 31.4
Solyc07g056520.3 Solanum lycopersicum HOM05D000344 ORTHO05D005714 2.8e-16 90.5 302 31.1
AUR62037581 Chenopodium quinoa HOM05D000344 ORTHO05D005714 3.7e-16 90.1 276 29.7
Lju3824A0G33 Lonicera japonica HOM05D000344 ORTHO05D005714 4.9e-16 89.7 184 35.3
Sopen07g029880 Solanum pennellii HOM05D000344 ORTHO05D005714 8.3e-16 89.0 298 30.2
MD10G1195900 Malus domestica HOM05D000344 ORTHO05D005714 3.1e-15 87.0 81 58.0
Peaxi162Scf00111g00632 Petunia axillaris HOM05D000344 ORTHO05D005714 4.1e-15 86.7 307 29.0
Duzib213G0656 Durio zibethinus HOM05D000344 ORTHO05D005714 5.4e-15 86.3 402 26.9
Duzib268G0479 Durio zibethinus HOM05D000344 ORTHO05D005714 1.2e-14 85.1 372 26.3
Nitab4.5_0001864g0030 Nicotiana tabacum HOM05D000344 ORTHO05D005714 2.0e-14 84.3 297 30.0
Gohir.A08G233800 Gossypium hirsutum HOM05D000344 ORTHO05D005714 2.7e-14 84.0 376 26.9
RcHm_v2.0_Chr5g0027521 Rosa chinensis HOM05D000344 ORTHO05D005714 5.9e-14 82.8 107 47.7
Aa31LG8G1660 Aethionema arabicum HOM05D000344 ORTHO05D005714 1.7e-13 81.3 276 29.0
Gohir.D08G254000 Gossypium hirsutum HOM05D000344 ORTHO05D005714 1.7e-13 81.3 376 26.3
Carub.0003s1411 Capsella rubella HOM05D000344 ORTHO05D005714 1.1e-12 78.6 287 28.2
THA.LOC104810408 Tarenaya hassleriana HOM05D000344 ORTHO05D005714 2.5e-12 77.4 268 31.0
AL3G26770 Arabidopsis lyrata HOM05D000344 ORTHO05D005714 5.6e-12 76.3 315 26.3
Cc05_g10140 Coffea canephora HOM05D000344 ORTHO05D005714 7.3e-12 75.9 211 31.3
SalBow6G7221 Salvia bowleyana HOM05D000344 ORTHO05D005714 9.5e-12 75.5 190 34.7
MSTRG.15003 Avicennia marina HOM05D000344 ORTHO05D005714 1.6e-11 74.7 217 31.8
HanXRQChr11g0329981 Helianthus annuus HOM05D000344 ORTHO05D005714 1.6e-11 74.7 271 30.3
SalBow8G3600 Salvia bowleyana HOM05D000344 ORTHO05D005714 1.6e-11 74.7 190 34.7
THA.LOC104816057 Tarenaya hassleriana HOM05D000344 ORTHO05D005714 1.6e-11 74.7 291 28.5
MSTRG.6703 Avicennia marina HOM05D000344 ORTHO05D005714 2.3e-10 70.9 184 33.2
CARHR089380 Cardamine hirsuta HOM05D000344 ORTHO05D005714 2.3e-10 70.9 297 25.9
ATR1098G138 Amborella trichopoda HOM05D000344 ORTHO05D005714 6.8e-10 69.3 231 32.5
C03p46950 Brassica napus HOM05D000344 ORTHO05D005714 1.2e-09 68.6 299 27.8
BolC3t16960H Brassica oleracea HOM05D000344 ORTHO05D005714 1.2e-09 68.6 269 29.4
SGA_v2.0_scaffold181G39774 Striga asiatica HOM05D000753 ORTHO05D005714 1.2e-09 68.6 192 32.3
CDE02G3726 Ceratophyllum demersum HOM05D000344 ORTHO05D005714 4.4e-09 66.6 276 29.3
CSS0048746 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D005714 7.5e-09 65.9 272 28.3
Thhalv10020237m.g Eutrema salsugineum HOM05D000344 ORTHO05D005714 7.5e-09 65.9 307 26.7
AT3G14400 Arabidopsis thaliana HOM05D000344 ORTHO05D005714 1.7e-08 64.7 304 26.6
Gorai.004G270900 Gossypium raimondii HOM05D000344 ORTHO05D005714 2.2e-08 64.3 65 49.2
unitig_37.g12554 Utricularia gibba HOM05D000344 ORTHO05D005714 2.2e-08 64.3 61 47.5
Migut.M00664 Erythranthe guttata HOM05D000344 ORTHO05D005714 2.9e-08 63.9 263 28.9
SHI32898 Sapria himalayana HOM05D000344 ORTHO05D005714 4.9e-08 63.2 65 50.8
ECA236G0178 Erigeron canadensis HOM05D000344 ORTHO05D005714 6.4e-08 62.8 294 29.3
A05p34990 Brassica napus HOM05D000344 ORTHO05D005714 1.4e-07 61.6 315 26.3
BraA05t22313Z Brassica rapa HOM05D000344 ORTHO05D005714 1.9e-07 61.2 308 26.9
C05p52940 Brassica napus HOM05D000344 ORTHO05D005714 3.2e-07 60.5 307 26.4
Gohir.A04G047300 Gossypium hirsutum HOM05D000344 ORTHO05D005714 4.1e-07 60.1 96 37.5
Gorai.009G358000 Gossypium raimondii HOM05D000344 ORTHO05D005714 4.1e-07 60.1 96 37.5
BolC5t33971H Brassica oleracea HOM05D000344 ORTHO05D005714 5.4e-07 59.7 306 25.5
Ah.06g187440 Amaranthus hybridus HOM05D000344 ORTHO05D005714 9.2e-07 58.9 308 25.0
HPP92_019553 Vanilla planifolia HOM05D000344 ORTHO05D005714 1.2e-06 58.5 271 25.8
Gohir.D05G332900 Gossypium hirsutum HOM05D000344 ORTHO05D005714 4.6e-06 56.6 93 38.7
BcaB04g18841 Brassica carinata HOM05D000344 ORTHO05D032204 6.0e-06 56.2 153 32.7
BcaC05g29086 Brassica carinata HOM05D000344 ORTHO05D005714 7.8e-06 55.8 248 27.8


User provided reference genes

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