Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 9.9e-161 570.1 291 100.0
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.1e-48 195.7 161 65.2
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.2e-44 184.5 161 64.0
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.2e-44 184.5 161 64.0
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 2.5e-39 166.8 182 54.4
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 6.8e-37 158.7 120 64.2
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.6e-36 156.8 171 54.4
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 3.4e-36 156.4 148 60.1
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 2.9e-35 153.3 144 58.3
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 4.9e-35 152.5 190 50.5
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 6.4e-35 152.1 155 56.8
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 1.7e-32 144.1 145 56.6
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 1.9e-31 140.6 146 52.7
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.3e-30 137.9 212 45.3
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.1e-29 134.8 139 54.7
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 9.0e-29 131.7 176 48.3
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 9.0e-29 131.7 189 45.0
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 9.0e-29 131.7 154 50.6
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 1.2e-28 131.3 197 44.7
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 2.0e-28 130.6 126 54.8
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 3.4e-28 129.8 129 53.5
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 4.4e-28 129.4 219 42.0
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 5.8e-28 129.0 132 53.0
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.7e-27 127.5 139 51.8
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 2.9e-27 126.7 128 53.9
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 8.4e-27 125.2 164 50.0
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.1e-26 124.8 162 50.0
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 7.1e-26 122.1 122 57.4
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 7.1e-26 122.1 141 48.9
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 9.3e-26 121.7 144 45.8
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 1.2e-25 121.3 169 45.6
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 2.1e-25 120.6 145 50.3
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 2.7e-25 120.2 122 51.6
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 2.7e-25 120.2 110 56.4
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 4.6e-25 119.4 133 51.9
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 4.6e-25 119.4 116 56.0
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 6.0e-25 119.0 113 54.0
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 7.8e-25 118.6 190 43.2
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 7.8e-25 118.6 145 49.0
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 1.7e-24 117.5 85 69.4
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 2.3e-24 117.1 192 42.2
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 2.3e-24 117.1 184 43.5
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 3.9e-24 116.3 130 49.2
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 6.6e-24 115.5 86 66.3
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 6.6e-24 115.5 115 58.3
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 1.5e-23 114.4 162 42.6
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 1.5e-23 114.4 140 47.1
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 1.5e-23 114.4 161 42.9
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 2.5e-23 113.6 119 52.1
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 2.5e-23 113.6 141 46.1
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.5e-23 113.6 162 42.6
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 2.5e-23 113.6 140 47.9
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.3e-23 113.2 162 42.0
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 4.3e-23 112.8 162 42.6
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 4.3e-23 112.8 112 52.7
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 7.3e-23 112.1 113 54.9
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 7.3e-23 112.1 140 47.1
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 9.6e-23 111.7 157 47.1
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.3e-22 111.3 113 50.4
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 1.6e-22 110.9 161 44.1
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 2.8e-22 110.2 161 44.1
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 2.8e-22 110.2 212 37.3
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 2.8e-22 110.2 115 54.8
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 6.2e-22 109.0 114 48.2
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 6.2e-22 109.0 113 49.6
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 8.1e-22 108.6 114 50.0
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 8.1e-22 108.6 104 56.7
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 8.1e-22 108.6 104 56.7
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.1e-21 108.2 243 34.6
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 1.1e-21 108.2 149 45.0
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 1.1e-21 108.2 111 55.0
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 1.4e-21 107.8 177 39.5
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 1.4e-21 107.8 85 63.5
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 1.4e-21 107.8 85 63.5
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 1.4e-21 107.8 85 63.5
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 1.4e-21 107.8 85 62.4
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 1.8e-21 107.5 114 47.4
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 2.4e-21 107.1 75 69.3
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 4.0e-21 106.3 85 62.4
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 4.0e-21 106.3 86 62.8
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 5.3e-21 105.9 177 39.5
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 5.3e-21 105.9 101 60.4
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 5.3e-21 105.9 143 48.3
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 5.3e-21 105.9 146 41.8
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 6.9e-21 105.5 177 41.2
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 9.0e-21 105.1 85 63.5
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 9.0e-21 105.1 84 65.5
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 9.0e-21 105.1 144 43.8
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 9.0e-21 105.1 143 44.8
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 1.2e-20 104.8 279 35.1
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 1.5e-20 104.4 119 47.1
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 1.5e-20 104.4 104 55.8
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 2.0e-20 104.0 84 63.1
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.0e-20 104.0 117 53.8
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 2.6e-20 103.6 146 43.2
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 3.4e-20 103.2 117 47.0
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 4.5e-20 102.8 139 48.2
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 4.5e-20 102.8 184 39.1
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 5.8e-20 102.4 120 49.2
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 5.8e-20 102.4 164 43.9
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 7.6e-20 102.1 141 43.3
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 9.9e-20 101.7 117 48.7
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 9.9e-20 101.7 113 46.9
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 9.9e-20 101.7 143 46.2
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 1.7e-19 100.9 81 64.2
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 2.9e-19 100.1 174 36.2
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 4.9e-19 99.4 84 61.9
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 6.4e-19 99.0 112 50.9
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.4e-18 97.8 113 49.6
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.4e-18 97.8 113 49.6
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 1.9e-18 97.4 164 37.2
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 2.4e-18 97.1 114 44.7
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 7.1e-18 95.5 125 41.6
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 2.1e-17 94.0 172 36.0
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 2.1e-17 94.0 125 42.4
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 4.6e-17 92.8 96 54.2
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 1.3e-16 91.3 160 38.8
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.8e-16 90.9 103 49.5
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 3.9e-16 89.7 149 39.6
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 9.6e-15 85.1 83 47.0
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 1.3e-14 84.7 114 41.2
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 1.6e-14 84.3 85 48.2
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 8.1e-14 82.0 142 36.6
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 8.1e-14 82.0 133 41.4
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 8.1e-14 82.0 85 48.2
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 1.4e-13 81.3 101 48.5
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 3.1e-13 80.1 106 45.3
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 6.9e-13 79.0 126 38.9
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 9.0e-13 78.6 171 35.1
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 7.6e-12 75.5 183 31.1
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 2.2e-11 73.9 77 48.1
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 6.5e-11 72.4 134 33.6
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 2.5e-10 70.5 131 36.6
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 7.1e-10 68.9 51 60.8
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 1.8e-08 64.3 81 45.7
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 2.3e-08 63.9 112 32.1
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 5.1e-08 62.8 81 40.7
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 3.3e-07 60.1 102 36.3


User provided reference genes

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