Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1083 Trochodendron aralioides HOM05D003960 ORTHO05D004297 9.6e-175 616.7 305 100.0
TAR667G0002 Trochodendron aralioides HOM05D003960 ORTHO05D004297 1.9e-53 213.8 134 80.6
Nn8g38616 Nelumbo nucifera HOM05D003960 ORTHO05D004297 7.9e-52 208.4 134 78.4
Dinv42402 Davidia involucrata HOM05D003960 ORTHO05D004297 1.9e-42 177.2 133 69.2
Potri.006G140700 Populus trichocarpa HOM05D003960 ORTHO05D004297 1.9e-42 177.2 136 68.4
TAR636G0800 Trochodendron aralioides HOM05D000292 ORTHO05D000172 4.8e-41 172.6 101 86.1
Manes.03G041100 Manihot esculenta HOM05D003960 ORTHO05D004297 6.3e-41 172.2 134 67.2
GSVIVG01015065001 Vitis vinifera HOM05D003960 ORTHO05D004297 1.4e-40 171.0 139 67.6
Gohir.D06G076200 Gossypium hirsutum HOM05D003960 ORTHO05D004297 5.3e-40 169.1 136 66.9
MSTRG.25994 Avicennia marina HOM05D003960 ORTHO05D004297 6.9e-40 168.7 138 60.9
Gorai.010G089200 Gossypium raimondii HOM05D003960 ORTHO05D004297 6.9e-40 168.7 136 66.9
Cc08_g01000 Coffea canephora HOM05D003960 ORTHO05D004297 2.0e-39 167.2 147 63.9
Oeu024207.1 Olea europaea HOM05D003960 ORTHO05D004297 4.5e-39 166.0 141 66.0
Sopen02g026730 Solanum pennellii HOM05D003960 ORTHO05D004297 7.7e-39 165.2 142 62.0
MSTRG.1711 Avicennia marina HOM05D003960 ORTHO05D004297 1.3e-38 164.5 142 61.3
Gohir.A06G077200 Gossypium hirsutum HOM05D003960 ORTHO05D004297 2.2e-38 163.7 136 64.7
Solyc02g082080.1 Solanum lycopersicum HOM05D003960 ORTHO05D004297 3.8e-38 162.9 142 60.6
Aqoxy7G04097 Aquilegia oxysepala HOM05D003960 ORTHO05D004297 8.5e-38 161.8 135 62.2
Sabra06G0110000 Salix brachista HOM05D003960 ORTHO05D004297 1.1e-37 161.4 130 66.2
PGSC0003DMG400013653 Solanum tuberosum HOM05D003960 ORTHO05D004297 1.1e-37 161.4 142 60.6
Nitab4.5_0009849g0010 Nicotiana tabacum HOM05D003960 ORTHO05D004297 2.5e-37 160.2 137 64.2
Cfa015757 Carpinus fangiana HOM05D003960 ORTHO05D004297 3.2e-37 159.8 137 61.3
Thecc.09G075400 Theobroma cacao HOM05D003960 ORTHO05D004297 3.2e-37 159.8 133 66.9
TWI63G0819 Tripterygium wilfordii HOM05D003960 ORTHO05D004297 3.2e-37 159.8 133 62.4
Lj1g0025356 Lotus japonicus HOM05D003960 ORTHO05D004297 5.5e-37 159.1 134 57.5
Migut.A00060 Erythranthe guttata HOM05D003960 ORTHO05D004297 7.2e-37 158.7 139 57.6
Medtr3g105330 Medicago truncatula HOM05D003960 ORTHO05D004297 1.2e-36 157.9 134 57.5
HanXRQChr03g0067151 Helianthus annuus HOM05D003960 ORTHO05D004297 1.6e-36 157.5 141 61.7
Lsat_1_v5_gn_7_58180 Lactuca sativa HOM05D003960 ORTHO05D004297 3.6e-36 156.4 140 62.9
TPR.G3570 Trifolium pratense HOM05D003960 ORTHO05D004297 4.6e-36 156.0 134 56.7
AUR62028262 Chenopodium quinoa HOM05D003960 ORTHO05D004297 6.1e-36 155.6 134 60.4
Oeu018026.1 Olea europaea HOM05D003960 ORTHO05D004297 6.1e-36 155.6 147 55.8
Hma1.2p1_0179F.1_g079470 Hydrangea macrophylla HOM05D003960 ORTHO05D004297 7.9e-36 155.2 143 62.9
Psat5g033920 Pisum sativum HOM05D003960 ORTHO05D004297 7.9e-36 155.2 134 57.5
Nn2g15194 Nelumbo nucifera HOM05D003960 ORTHO05D004297 1.0e-35 154.8 134 62.7
CAN.G65.51 Capsicum annuum HOM05D003960 ORTHO05D004297 1.4e-35 154.5 145 57.2
PSO104G0019 Papaver somniferum HOM05D003960 ORTHO05D004297 2.3e-35 153.7 138 59.4
SGA_v2.0_scaffold169G38715 Striga asiatica HOM05D003960 ORTHO05D004297 2.3e-35 153.7 140 59.3
MSTRG.14089 Avicennia marina HOM05D003960 ORTHO05D004297 3.0e-35 153.3 137 60.6
Atru.chr7.1719 Acer truncatum HOM05D003960 ORTHO05D004297 3.9e-35 152.9 137 59.9
COL.COLO4_18085 Corchorus olitorius HOM05D003960 ORTHO05D004297 3.9e-35 152.9 133 64.7
SGA_v2.0_scaffold64G21904 Striga asiatica HOM05D003960 ORTHO05D004297 3.9e-35 152.9 136 58.8
Duzib150G0920 Durio zibethinus HOM05D003960 ORTHO05D004297 5.1e-35 152.5 135 64.4
Duzib187G1941 Durio zibethinus HOM05D003960 ORTHO05D004297 5.1e-35 152.5 136 64.0
Glyma.17G219400 Glycine max HOM05D003960 ORTHO05D004297 6.7e-35 152.1 139 60.4
Lj7P209T18 Lonicera japonica HOM05D003960 ORTHO05D004297 8.8e-35 151.8 141 61.0
CSS0013785 Camellia sinensis var. sinensis HOM05D003960 ORTHO05D004297 1.1e-34 151.4 152 52.6
CiPaw.16G067200 Carya illinoinensis HOM05D003960 ORTHO05D004297 1.5e-34 151.0 137 59.9
Ca_15825_v3 Cicer arietinum L. HOM05D003960 ORTHO05D004297 1.5e-34 151.0 134 56.7
Ca_28263_v3 Cicer arietinum L. HOM05D003960 ORTHO05D004297 1.5e-34 151.0 134 56.7
unitig_32.g11516 Utricularia gibba HOM05D003960 ORTHO05D004297 2.0e-34 150.6 136 58.8
MELO3C011494.2 Cucumis melo HOM05D003960 ORTHO05D004297 2.6e-34 150.2 135 57.0
Glyma.06G057400 Glycine max HOM05D003960 ORTHO05D004297 2.6e-34 150.2 134 54.5
DCAR_001242 Daucus carota HOM05D003960 ORTHO05D004297 3.3e-34 149.8 134 58.2
Lalb_Chr23g0268031 Lupinus albus HOM05D003960 ORTHO05D004297 3.3e-34 149.8 137 59.9
Sed0008240 Sechium edule HOM05D003960 ORTHO05D004297 3.3e-34 149.8 135 57.8
VMungo1309G2154 Vigna mungo HOM05D003960 ORTHO05D004297 3.3e-34 149.8 134 54.5
THA.LOC104810995 Tarenaya hassleriana HOM05D003960 ORTHO05D004297 4.4e-34 149.4 135 59.3
ClCG08G009750 Citrullus lanatus HOM05D003960 ORTHO05D004297 5.7e-34 149.1 135 56.3
Glyma.14G107100 Glycine max HOM05D003960 ORTHO05D004297 5.7e-34 149.1 138 58.0
Ciclev10009830m.g Citrus clementina HOM05D003960 ORTHO05D004297 1.3e-33 147.9 136 58.1
Glyma.04G057000 Glycine max HOM05D003960 ORTHO05D004297 1.3e-33 147.9 134 54.5
CsaV3_6G031870 Cucumis sativus L. HOM05D003960 ORTHO05D004297 2.2e-33 147.1 135 55.6
SalBow4G1627 Salvia bowleyana HOM05D003960 ORTHO05D004297 3.7e-33 146.4 137 59.1
MD08G1045600 Malus domestica HOM05D003960 ORTHO05D004297 8.2e-33 145.2 142 57.0
FvH4_2g30830 Fragaria vesca HOM05D003960 ORTHO05D004297 1.1e-32 144.8 135 54.8
FAN24G1040 Fragaria x ananassa HOM05D003960 ORTHO05D004297 1.1e-32 144.8 135 54.8
Gohir.A13G190100 Gossypium hirsutum HOM05D003960 ORTHO05D004297 1.1e-32 144.8 135 61.5
PSO724G1087 Papaver somniferum HOM05D003960 ORTHO05D004297 1.8e-32 144.1 136 56.6
Lsat_1_v5_gn_8_70441 Lactuca sativa HOM05D003960 ORTHO05D004297 2.4e-32 143.7 135 57.0
Phvul.009G083400 Phaseolus vulgaris HOM05D003960 ORTHO05D004297 2.4e-32 143.7 134 53.7
Sabra06G0169100 Salix brachista HOM05D003960 ORTHO05D004297 2.4e-32 143.7 142 54.2
CiPaw.15G090800 Carya illinoinensis HOM05D003960 ORTHO05D004297 4.1e-32 142.9 138 57.2
PGR044G2188 Punica granatum HOM05D003960 ORTHO05D004297 4.1e-32 142.9 140 56.4
VMungo1309G0846 Vigna mungo HOM05D003960 ORTHO05D004297 4.1e-32 142.9 134 52.2
Manes.16G086700 Manihot esculenta HOM05D003960 ORTHO05D004297 5.3e-32 142.5 134 56.0
Prupe.1G402400 Prunus persica HOM05D003960 ORTHO05D004297 5.3e-32 142.5 140 56.4
Ca_13094_v3 Cicer arietinum L. HOM05D003960 ORTHO05D004297 9.1e-32 141.7 137 59.9
Os09g0440700 Oryza sativa ssp. japonica HOM05D003960 ORTHO05D004297 9.1e-32 141.7 141 55.3
FAN20G3158 Fragaria x ananassa HOM05D003960 ORTHO05D004297 1.2e-31 141.4 135 54.1
Gohir.D13G196345 Gossypium hirsutum HOM05D003960 ORTHO05D004297 1.2e-31 141.4 135 59.3
MD15G1048000 Malus domestica HOM05D003960 ORTHO05D004297 1.2e-31 141.4 144 56.9
Medtr1g015000 Medicago truncatula HOM05D003960 ORTHO05D004297 1.2e-31 141.4 137 57.7
Potri.006G219200 Populus trichocarpa HOM05D003960 ORTHO05D004297 1.2e-31 141.4 141 55.3
FAN15G2682 Fragaria x ananassa HOM05D003960 ORTHO05D004297 1.5e-31 141.0 135 54.1
MD08G1044900 Malus domestica HOM05D003960 ORTHO05D004297 1.5e-31 141.0 142 55.6
Gorai.013G223700 Gossypium raimondii HOM05D003960 ORTHO05D004297 2.0e-31 140.6 135 61.5
PSO135G0474 Papaver somniferum HOM05D003960 ORTHO05D004297 2.0e-31 140.6 135 55.6
CiPaw.05G156700 Carya illinoinensis HOM05D003960 ORTHO05D004297 2.6e-31 140.2 138 56.5
CiPaw.05G157200 Carya illinoinensis HOM05D003960 ORTHO05D004297 2.6e-31 140.2 138 56.5
FAN27G1345 Fragaria x ananassa HOM05D003960 ORTHO05D004297 3.4e-31 139.8 135 53.3
Sc06g0000100 Simmondsia chinensis HOM05D003960 ORTHO05D004297 3.4e-31 139.8 135 54.8
COL.COLO4_21157 Corchorus olitorius HOM05D003960 ORTHO05D004297 4.5e-31 139.4 140 57.9
Gorai.001G019400 Gossypium raimondii HOM05D003960 ORTHO05D004297 1.0e-30 138.3 136 58.8
Psat6g023040 Pisum sativum HOM05D003960 ORTHO05D004297 1.0e-30 138.3 136 60.3
HPP92_016237 Vanilla planifolia HOM05D003960 ORTHO05D004297 1.7e-30 137.5 134 53.7
CANSAT25G0735 Cannabis sativa HOM05D003960 ORTHO05D004297 2.9e-30 136.7 142 52.8
vmacro04769 Vaccinium macrocarpon HOM05D003960 ORTHO05D004297 2.9e-30 136.7 138 53.6
Aa31LG1G14040 Aethionema arabicum HOM05D003960 ORTHO05D004297 5.0e-30 136.0 138 55.8
Gohir.D07G018700 Gossypium hirsutum HOM05D003960 ORTHO05D004297 5.0e-30 136.0 136 58.1
BcaB08g36516 Brassica carinata HOM05D003960 ORTHO05D004297 6.5e-30 135.6 139 54.7
BcaC04g19455 Brassica carinata HOM05D003960 ORTHO05D004297 6.5e-30 135.6 139 54.0
Sp6g23830 Schrenkiella parvula HOM05D003960 ORTHO05D004297 6.5e-30 135.6 136 54.4
TWI34G1946 Tripterygium wilfordii HOM05D003960 ORTHO05D004297 6.5e-30 135.6 139 56.8
Zm00001eb314090 Zea mays HOM05D003960 ORTHO05D004297 6.5e-30 135.6 146 52.7
C09p55580 Brassica napus HOM05D003960 ORTHO05D004297 1.1e-29 134.8 139 53.2
BolC9t58421H Brassica oleracea HOM05D003960 ORTHO05D004297 1.1e-29 134.8 139 53.2
QL11p001038 Quercus lobata HOM05D003960 ORTHO05D004297 1.1e-29 134.8 118 61.0
A02p06410 Brassica napus HOM05D003960 ORTHO05D004297 1.4e-29 134.4 138 54.3
A10p19370 Brassica napus HOM05D003960 ORTHO05D004297 1.4e-29 134.4 139 54.0
BraA02t05586Z Brassica rapa HOM05D003960 ORTHO05D004297 1.4e-29 134.4 138 54.3
BraA10t44014Z Brassica rapa HOM05D003960 ORTHO05D004297 1.4e-29 134.4 139 54.0
RcHm_v2.0_Chr6g0312031 Rosa chinensis HOM05D003960 ORTHO05D004297 1.4e-29 134.4 140 52.1
Duzib187G0159 Durio zibethinus HOM05D003960 ORTHO05D004297 1.9e-29 134.0 139 54.7
BcaB05g22823 Brassica carinata HOM05D003960 ORTHO05D004297 5.5e-29 132.5 135 51.9
BcaB05g22824 Brassica carinata HOM05D003960 ORTHO05D004297 5.5e-29 132.5 135 51.9
PGR142G3331 Punica granatum HOM05D003960 ORTHO05D004297 5.5e-29 132.5 151 53.0
Thecc.09G065300 Theobroma cacao HOM05D003960 ORTHO05D004297 5.5e-29 132.5 140 54.3
ECA236G3206 Erigeron canadensis HOM05D003960 ORTHO05D004297 7.2e-29 132.1 132 53.0
ATR0598G332 Amborella trichopoda HOM05D003960 ORTHO05D004297 1.2e-28 131.3 134 53.7
BolC3t13642H Brassica oleracea HOM05D003960 ORTHO05D004297 1.2e-28 131.3 136 52.2
Thhalv10015467m.g Eutrema salsugineum HOM05D003960 ORTHO05D004297 1.2e-28 131.3 138 52.9
TPR.G38913 Trifolium pratense HOM05D003960 ORTHO05D004297 1.2e-28 131.3 138 53.6
C03p11710 Brassica napus HOM05D003960 ORTHO05D004297 1.6e-28 131.0 134 53.0
RhsimUnG0073900 Rhododendron simsii HOM05D003960 ORTHO05D004297 1.6e-28 131.0 137 51.1
TWI32G1339 Tripterygium wilfordii HOM05D003960 ORTHO05D004297 2.1e-28 130.6 140 51.4
Cfa002978 Carpinus fangiana HOM05D003960 ORTHO05D004297 6.1e-28 129.0 120 60.8
SHI27998 Sapria himalayana HOM05D003960 ORTHO05D004297 6.1e-28 129.0 137 51.8
Duzib150G1216 Durio zibethinus HOM05D003960 ORTHO05D004297 8.0e-28 128.6 139 54.0
Gohir.A07G018900 Gossypium hirsutum HOM05D003960 ORTHO05D004297 8.0e-28 128.6 136 55.1
Gorai.013G221100 Gossypium raimondii HOM05D003960 ORTHO05D004297 8.0e-28 128.6 135 53.3
Zm00001eb100190 Zea mays HOM05D003960 ORTHO05D004297 8.0e-28 128.6 142 52.1
BcaC03g13784 Brassica carinata HOM05D003960 ORTHO05D004297 1.4e-27 127.9 136 54.4
Gohir.D13G195000 Gossypium hirsutum HOM05D003960 ORTHO05D004297 1.4e-27 127.9 134 53.7
Carub.0006s1899 Capsella rubella HOM05D003960 ORTHO05D004297 1.8e-27 127.5 120 54.2
Hma1.2p1_0278F.1_g111800 Hydrangea macrophylla HOM05D003960 ORTHO05D004297 1.8e-27 127.5 135 51.1
CARHR192160 Cardamine hirsuta HOM05D003960 ORTHO05D004297 3.0e-27 126.7 139 52.5
Gohir.A13G188100 Gossypium hirsutum HOM05D003960 ORTHO05D004297 2.6e-26 123.6 135 51.9
AL6G32200 Arabidopsis lyrata HOM05D003960 ORTHO05D004297 3.3e-26 123.2 140 48.6
AT5G20650 Arabidopsis thaliana HOM05D003960 ORTHO05D004297 1.3e-25 121.3 125 52.0
CiPaw.03G205100 Carya illinoinensis HOM05D003960 ORTHO05D004297 1.3e-25 121.3 122 54.9
Eucgr.J01772 Eucalyptus grandis HOM05D003960 ORTHO05D004297 1.3e-25 121.3 143 49.0
Lj5g0010758 Lotus japonicus HOM05D003960 ORTHO05D004297 1.3e-25 121.3 139 53.2
HanXRQChr05g0136461 Helianthus annuus HOM05D003960 ORTHO05D004297 2.2e-25 120.6 135 51.1
Atru.chr7.1831 Acer truncatum HOM05D003960 ORTHO05D004297 3.7e-25 119.8 138 47.8
vmacro17132 Vaccinium macrocarpon HOM05D003960 ORTHO05D004297 8.2e-25 118.6 144 48.6
CANSAT56G3391 Cannabis sativa HOM05D003960 ORTHO05D004297 1.1e-24 118.2 129 50.4
Eucgr.B00068 Eucalyptus grandis HOM05D003960 ORTHO05D004297 9.1e-24 115.2 135 48.9
SEGI_35471 Sequoiadendron giganteum HOM05D003960 ORTHO05D004297 9.1e-24 115.2 134 45.5
EL10Ac8g19048 Beta vulgaris HOM05D003960 ORTHO05D004297 1.0e-22 111.7 89 65.2
Peaxi162Scf00486g00012 Petunia axillaris HOM05D003960 ORTHO05D004297 8.5e-22 108.6 107 60.7
AUR62025257 Chenopodium quinoa HOM05D003960 ORTHO05D004297 2.7e-20 103.6 101 56.4
PSO421G0342 Papaver somniferum HOM05D003960 ORTHO05D004297 2.7e-20 103.6 105 56.2
MBI19_g09927_MAGBIO Magnolia biondii HOM05D003960 ORTHO05D004297 1.8e-19 100.9 96 60.4
GSVIVG01035488001 Vitis vinifera HOM05D000633 ORTHO05D000477 1.8e-19 100.9 88 61.4
Eucgr.K01930 Eucalyptus grandis HOM05D003960 ORTHO05D004297 8.8e-19 98.6 131 45.8
Actinidia39652 Actinidia chinensis HOM05D003960 ORTHO05D004297 1.3e-17 94.7 93 59.1
Eucgr.L03350 Eucalyptus grandis HOM05D003960 ORTHO05D004297 3.7e-17 93.2 135 43.0
Nitab4.5_0003159g0080 Nicotiana tabacum HOM05D003960 ORTHO05D004297 1.1e-16 91.7 129 46.5
Os08g0455900 Oryza sativa ssp. japonica HOM05D003960 ORTHO05D004297 4.1e-16 89.7 148 40.5
Mapoly0011s0109 Marchantia polymorpha HOM05D003960 ORTHO05D004297 2.0e-15 87.4 141 40.4
AagrBONN_evm.TU.Sc2ySwM_228.672 Anthoceros agrestis HOM05D003960 ORTHO05D004297 2.7e-15 87.0 125 42.4
Zm00001eb068890 Zea mays HOM05D000032 ORTHO05D004297 5.9e-15 85.9 98 52.0
SMO174G0135 Selaginella moellendorffii HOM05D003960 ORTHO05D004297 8.5e-14 82.0 121 41.3
SEGI_26542 Sequoiadendron giganteum HOM05D003960 ORTHO05D004297 8.5e-14 82.0 140 38.6
Pp3c7_1360 Physcomitrium patens HOM05D003960 ORTHO05D004297 1.5e-13 81.3 119 42.9
Rhsim05G0006800 Rhododendron simsii HOM05D003960 ORTHO05D004297 3.2e-13 80.1 93 51.6
HanXRQChr13g0407981 Helianthus annuus HOM05D003960 ORTHO05D004297 3.6e-12 76.6 60 70.0
HanXRQChr06g0171901 Helianthus annuus HOM05D003960 ORTHO05D004297 5.2e-11 72.8 55 60.0
Eucgr.C03322 Eucalyptus grandis HOM05D003960 ORTHO05D004297 3.4e-10 70.1 45 68.9
Mapoly0013s0019 Marchantia polymorpha HOM05D001242 ORTHO05D004297 6.3e-09 65.9 115 33.9
TAR376G1201 Trochodendron aralioides HOM05D001065 ORTHO05D003103 2.4e-08 63.9 50 70.0
BraA03t10329Z Brassica rapa HOM05D003960 ORTHO05D004297 4.1e-08 63.2 62 56.5
SMO001G0023 Selaginella moellendorffii HOM05D001242 ORTHO05D004297 4.1e-08 63.2 117 36.8
SMO307G0071 Selaginella moellendorffii HOM05D001242 ORTHO05D004297 9.1e-08 62.0 117 36.8
CBR_g10988 Chara braunii HOM05D003960 ORTHO05D004297 4.5e-07 59.7 116 30.2
Sp5g14840 Schrenkiella parvula HOM05D001242 ORTHO05D001089 1.7e-06 57.8 118 29.7
SEGI_28376 Sequoiadendron giganteum HOM05D001242 ORTHO05D001089 1.7e-06 57.8 118 33.9
MCO15G252 Micromonas commoda HOM05D003960 ORTHO05D004297 2.3e-06 57.4 124 33.1
Haze_18322 Corylus avellana HOM05D003960 ORTHO05D004297 3.8e-06 56.6 62 50.0


User provided reference genes

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