Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 1.1e-54 216.5 112 100.0
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 5.9e-21 104.4 108 54.6
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 5.9e-21 104.4 108 54.6
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 7.7e-21 104.0 108 54.6
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.3e-20 103.2 112 50.0
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 6.5e-20 100.9 113 54.9
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 6.5e-20 100.9 113 53.1
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 6.5e-20 100.9 113 53.1
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.9e-19 99.4 108 49.1
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 5.5e-19 97.8 97 58.8
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 9.4e-19 97.1 108 50.0
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 2.1e-18 95.9 112 50.0
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 2.1e-18 95.9 110 54.5
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 2.7e-18 95.5 115 53.9
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 8.0e-18 94.0 114 49.1
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 8.0e-18 94.0 113 53.1
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 1.0e-17 93.6 115 47.8
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.0e-17 93.6 115 47.8
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 5.2e-17 91.3 111 50.5
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 1.2e-16 90.1 101 53.5
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 2.0e-16 89.4 112 48.2
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.3e-15 86.7 118 48.3
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 2.2e-15 85.9 118 48.3
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 8.2e-15 84.0 110 45.5
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.4e-14 83.2 118 47.5
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 5.3e-14 81.3 99 54.5
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 5.3e-14 81.3 106 45.3
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 5.3e-14 81.3 111 54.1
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 7.0e-14 80.9 117 45.3
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 9.1e-14 80.5 120 44.2
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.2e-13 80.1 116 44.8
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 1.2e-13 80.1 119 47.1
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 2.0e-13 79.3 123 48.8
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 4.5e-13 78.2 110 42.7
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 7.7e-13 77.4 126 41.3
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 6.5e-12 74.3 119 40.3
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 1.5e-11 73.2 98 49.0
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 1.5e-11 73.2 77 51.9
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 1.9e-11 72.8 109 43.1
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 1.9e-11 72.8 109 43.1
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 4.2e-11 71.6 112 44.6
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 5.5e-11 71.2 113 45.1
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 5.5e-11 71.2 107 48.6
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 9.4e-11 70.5 61 59.0
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 1.2e-10 70.1 131 39.7
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 1.2e-10 70.1 112 44.6
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 1.2e-10 70.1 76 53.9
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 1.2e-10 70.1 63 57.1
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 1.0e-09 67.0 114 41.2
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 1.4e-09 66.6 110 43.6
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 1.4e-09 66.6 62 61.3
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 1.8e-09 66.2 96 47.9
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 2.3e-09 65.9 93 45.2
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 2.3e-09 65.9 85 48.2
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 2.0e-08 62.8 78 53.8
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 2.6e-08 62.4 107 44.9
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 2.6e-08 62.4 117 41.0
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 3.4e-08 62.0 116 39.7
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 3.4e-08 62.0 112 38.4
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 9.8e-08 60.5 63 55.6
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 2.2e-07 59.3 111 42.3
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 2.2e-07 59.3 52 63.5
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 2.8e-07 58.9 107 41.1
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 3.7e-07 58.5 98 40.8
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 3.7e-07 58.5 110 38.2
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 3.7e-07 58.5 100 41.0
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 1.4e-06 56.6 113 38.9
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 1.4e-06 56.6 65 50.8
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 1.8e-06 56.2 100 42.0
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.8e-06 56.2 117 41.0
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 3.1e-06 55.5 110 39.1
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 5.4e-06 54.7 103 42.7
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 7.0e-06 54.3 81 44.4
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 9.1e-06 53.9 111 36.0


User provided reference genes

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