Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 5.1e-84 314.3 151 100.0
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 1.7e-68 262.7 149 83.9
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 1.1e-67 260.0 150 85.3
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 2.8e-66 255.4 153 79.1
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 6.2e-66 254.2 153 80.4
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 8.1e-66 253.8 152 81.6
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 4.0e-65 251.5 153 78.4
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 4.0e-65 251.5 146 83.6
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 4.0e-65 251.5 157 78.3
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 6.9e-65 250.8 152 78.9
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 9.0e-65 250.4 157 78.3
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 1.2e-64 250.0 150 78.7
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.2e-64 250.0 150 78.7
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.2e-64 250.0 157 77.7
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 1.2e-64 250.0 152 78.3
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 1.5e-64 249.6 143 85.3
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 1.5e-64 249.6 146 82.2
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 2.6e-64 248.8 153 78.4
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 2.6e-64 248.8 153 78.4
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 2.6e-64 248.8 153 78.4
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 2.6e-64 248.8 150 78.0
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 2.6e-64 248.8 153 79.1
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 3.4e-64 248.4 142 83.8
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 4.5e-64 248.1 148 81.1
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 4.5e-64 248.1 153 77.1
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 4.5e-64 248.1 142 84.5
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 4.5e-64 248.1 142 84.5
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 4.5e-64 248.1 155 79.4
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 7.6e-64 247.3 153 78.4
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 9.9e-64 246.9 144 81.2
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 9.9e-64 246.9 146 80.1
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 1.3e-63 246.5 142 83.8
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 1.3e-63 246.5 142 83.1
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 2.2e-63 245.7 150 77.3
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 2.2e-63 245.7 152 78.3
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 2.9e-63 245.4 142 82.4
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 2.9e-63 245.4 146 79.5
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 2.9e-63 245.4 152 77.6
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 3.8e-63 245.0 152 78.3
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 3.8e-63 245.0 142 83.8
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 4.9e-63 244.6 152 75.7
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 6.4e-63 244.2 158 77.2
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 1.1e-62 243.4 142 81.0
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 1.4e-62 243.0 148 79.7
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 1.4e-62 243.0 152 76.3
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 1.4e-62 243.0 152 77.0
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 1.9e-62 242.7 152 76.3
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 1.9e-62 242.7 152 77.0
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 1.9e-62 242.7 152 77.0
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 2.4e-62 242.3 153 76.5
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 3.2e-62 241.9 152 76.3
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 3.2e-62 241.9 153 76.5
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 3.2e-62 241.9 153 76.5
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 3.2e-62 241.9 154 76.6
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 3.2e-62 241.9 141 82.3
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 4.2e-62 241.5 153 75.2
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 5.4e-62 241.1 155 76.1
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 5.4e-62 241.1 146 78.8
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 5.4e-62 241.1 153 75.8
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 5.4e-62 241.1 152 75.7
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 7.1e-62 240.7 141 81.6
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 7.1e-62 240.7 153 75.8
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 9.3e-62 240.4 152 76.3
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 2.7e-61 238.8 141 80.9
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 2.7e-61 238.8 149 75.8
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 3.5e-61 238.4 150 75.3
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 3.5e-61 238.4 152 75.7
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 6.0e-61 237.7 151 72.8
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 6.0e-61 237.7 145 75.9
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 7.9e-61 237.3 153 74.5
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 1.0e-60 236.9 156 73.1
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 1.0e-60 236.9 141 80.1
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 1.8e-60 236.1 153 72.5
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 3.0e-60 235.3 145 75.9
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 3.0e-60 235.3 156 73.7
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 3.9e-60 235.0 153 75.2
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 1.1e-59 233.4 141 79.4
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 1.5e-59 233.0 176 67.0
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 1.9e-59 232.6 151 74.2
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 1.9e-59 232.6 148 76.4
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 3.3e-59 231.9 156 73.7
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 7.4e-59 230.7 150 71.3
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 9.6e-59 230.3 154 72.1
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 1.3e-58 229.9 153 68.6
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 1.3e-58 229.9 153 72.5
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 1.6e-58 229.6 148 75.7
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 1.6e-58 229.6 158 70.3
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 2.8e-58 228.8 162 69.1
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 3.6e-58 228.4 154 68.2
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 6.2e-58 227.6 137 76.6
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 1.8e-57 226.1 152 69.1
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 3.1e-57 225.3 173 66.5
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 4.0e-57 224.9 151 70.2
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 5.3e-57 224.6 154 66.9
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 9.0e-57 223.8 160 70.6
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 9.0e-57 223.8 150 71.3
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 2.0e-56 222.6 145 74.5
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 2.6e-56 222.2 153 71.9
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 9.9e-56 220.3 142 75.4
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 9.9e-56 220.3 151 69.5
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 1.7e-55 219.5 142 73.9
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 1.9e-54 216.1 141 73.0
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 7.1e-54 214.2 142 71.1
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 9.3e-54 213.8 142 71.1
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 9.3e-54 213.8 132 79.5
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 1.2e-53 213.4 147 68.7
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 1.8e-52 209.5 141 70.9
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 2.3e-52 209.1 142 69.7
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 3.9e-52 208.4 142 69.7
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 3.9e-52 208.4 141 70.2
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 3.9e-52 208.4 141 70.2
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 3.9e-52 208.4 141 70.2
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 1.9e-51 206.1 156 64.7
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 4.3e-51 204.9 141 69.5
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 4.3e-51 204.9 141 69.5
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 5.6e-51 204.5 141 68.8
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 5.6e-51 204.5 141 68.8
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 1.3e-50 203.4 142 68.3
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 1.6e-50 203.0 191 55.0
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 1.4e-46 189.9 144 68.8
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 1.3e-42 176.8 127 63.0
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 8.2e-42 174.1 112 74.1
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 7.6e-40 167.5 105 75.2
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 1.0e-39 167.2 147 55.8
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 6.7e-36 154.5 104 73.1
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 9.7e-35 150.6 104 68.3
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 3.7e-34 148.7 146 50.7
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 1.3e-31 140.2 138 50.0
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 1.7e-31 139.8 93 69.9
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 7.9e-29 131.0 96 66.7
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 1.5e-27 126.7 87 70.1
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 5.7e-27 124.8 141 46.1
Sopen03g039470 Solanum pennellii HOM05D005761 ORTHO05D007286 1.3e-23 113.6 70 72.9
HanXRQChr11g0333491 Helianthus annuus HOM05D005761 ORTHO05D007286 2.6e-19 99.4 121 42.1
HanXRQChr08g0232791 Helianthus annuus HOM05D005761 ORTHO05D007286 2.4e-17 92.8 121 39.7
Rhsim08G0224100 Rhododendron simsii HOM05D000414 ORTHO05D000276 2.5e-14 82.8 57 75.4
Rhsim08G0203300 Rhododendron simsii HOM05D005761 ORTHO05D007286 2.0e-11 73.2 48 70.8


User provided reference genes

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