Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 1.9e-279 965.3 514 100.0
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 6.9e-226 787.3 515 78.8
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 1.2e-214 750.0 515 73.2
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 6.7e-213 744.2 464 82.1
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 2.4e-210 735.7 518 74.5
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 2.3e-205 719.2 520 73.7
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 1.2e-204 716.8 520 71.0
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 1.2e-204 716.8 520 71.5
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 8.3e-203 710.7 514 71.6
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 8.5e-200 700.7 525 70.5
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 1.5e-199 699.9 527 70.0
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 1.5e-199 699.9 518 73.2
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 1.2e-198 696.8 525 70.3
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.6e-198 696.4 528 69.7
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 6.1e-198 694.5 522 69.9
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 8.0e-198 694.1 528 69.5
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 2.3e-197 692.6 530 69.2
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 5.2e-197 691.4 522 69.5
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 1.2e-196 690.3 526 69.4
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 1.6e-193 679.9 529 66.7
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 4.5e-193 678.3 529 67.1
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 4.5e-193 678.3 523 69.6
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 7.7e-193 677.6 531 67.0
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 1.7e-192 676.4 525 69.3
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 2.3e-192 676.0 524 67.9
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 2.9e-192 675.6 532 68.2
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 3.8e-192 675.2 527 67.2
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 2.5e-191 672.5 517 68.5
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 2.5e-191 672.5 524 67.9
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 2.5e-191 672.5 527 66.8
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 5.5e-191 671.4 529 68.1
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 9.5e-191 670.6 528 67.2
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 1.2e-190 670.2 528 68.6
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 1.2e-190 670.2 523 68.1
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 2.8e-190 669.1 527 66.2
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 4.7e-190 668.3 517 67.5
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 8.0e-190 667.5 520 69.4
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 1.4e-189 666.8 531 65.2
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 3.0e-189 665.6 526 68.3
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 5.2e-189 664.8 531 66.7
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 1.2e-188 663.7 523 67.1
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 2.6e-188 662.5 529 66.9
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 8.3e-187 657.5 523 68.8
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.4e-186 656.8 521 66.6
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 2.7e-185 652.5 543 66.1
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 1.9e-183 646.4 520 66.5
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 2.5e-183 646.0 515 65.6
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 2.5e-183 646.0 538 66.5
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 4.3e-183 645.2 519 66.9
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 3.6e-182 642.1 533 64.0
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 4.7e-182 641.7 520 66.0
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 4.7e-182 641.7 521 66.2
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 1.4e-181 640.2 528 63.6
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 2.3e-181 639.4 527 64.9
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 6.8e-181 637.9 476 69.1
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 2.0e-180 636.3 528 65.0
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 3.4e-180 635.6 525 63.8
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 5.8e-180 634.8 521 66.0
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 7.5e-180 634.4 519 65.3
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 9.8e-180 634.0 525 68.0
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 1.7e-179 633.3 533 64.7
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 1.9e-178 629.8 528 65.5
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 1.9e-178 629.8 520 66.2
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 3.2e-178 629.0 521 65.1
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 7.0e-178 627.9 525 63.8
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 1.2e-177 627.1 515 64.1
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 6.0e-177 624.8 496 67.1
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 7.8e-177 624.4 527 63.6
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 3.0e-176 622.5 463 69.5
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 3.9e-176 622.1 520 63.1
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 1.9e-175 619.8 523 62.1
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 1.9e-175 619.8 522 64.2
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 3.3e-175 619.0 527 62.6
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 5.6e-175 618.2 527 63.0
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 3.6e-174 615.5 540 63.0
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 6.2e-174 614.8 526 64.3
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 6.2e-174 614.8 522 64.4
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 6.2e-174 614.8 532 62.4
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.1e-173 614.0 521 64.5
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.8e-173 613.2 522 64.4
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.8e-173 613.2 522 64.4
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 1.5e-172 610.1 514 63.0
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 2.0e-172 609.8 524 62.6
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 2.6e-172 609.4 513 63.7
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 4.4e-172 608.6 540 62.6
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 4.1e-170 602.1 519 64.7
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 7.1e-170 601.3 523 63.5
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 1.6e-169 600.1 515 62.7
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 2.1e-169 599.7 539 60.9
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 3.5e-169 599.0 519 62.2
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 4.6e-169 598.6 513 62.4
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 1.7e-168 596.7 525 61.7
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 2.3e-168 596.3 530 61.7
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 4.7e-166 588.6 528 63.4
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 8.9e-165 584.3 518 62.4
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 2.7e-161 572.8 514 60.3
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 1.7e-160 570.1 514 60.3
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 2.5e-159 566.2 516 60.9
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 2.5e-159 566.2 509 60.7
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 4.3e-159 565.5 509 60.9
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 2.1e-158 563.1 511 61.3
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 4.7e-158 562.0 520 60.4
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 1.8e-157 560.1 513 60.4
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 1.7e-155 553.5 537 57.4
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 2.1e-153 546.6 473 61.7
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 1.1e-151 540.8 528 57.0
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 5.6e-143 511.9 522 56.5
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 2.8e-142 509.6 523 56.2
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 1.4e-141 507.3 523 56.4
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 6.4e-139 498.4 487 57.1
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 3.7e-134 482.6 517 55.9
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 1.8e-133 480.3 551 51.9
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 1.8e-133 480.3 533 53.7
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 1.2e-132 477.6 305 78.7
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 4.2e-122 442.6 511 51.3
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 2.2e-115 420.2 521 48.0
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 2.2e-99 367.1 512 45.9
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 7.7e-92 342.0 572 40.7
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 1.2e-87 328.2 301 61.5
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 7.8e-60 235.7 286 49.0
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 4.6e-52 209.9 203 61.1
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 4.3e-50 203.4 348 39.4
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 2.6e-39 167.5 284 38.4
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 2.4e-24 117.9 499 27.3
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 3.1e-24 117.5 547 26.0
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 5.8e-23 113.2 81 67.9
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 4.8e-17 93.6 99 53.5
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 1.8e-16 91.7 54 81.5
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 5.8e-15 86.7 67 67.2
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 7.6e-15 86.3 68 55.9
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 5.5e-13 80.1 54 66.7
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.3e-11 75.5 79 58.2
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 1.5e-10 72.0 170 32.4
PRCOL_00002377 Prasinoderma coloniale HOM05D005917 ORTHO05D333437 1.3e-06 58.9 347 22.8


User provided reference genes

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