Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1044 Trochodendron aralioides HOM05D005265 ORTHO05D006326 1.0e-64 250.0 130 100.0
TAR626G0103 Trochodendron aralioides HOM05D005265 ORTHO05D006326 5.4e-58 227.6 131 91.6
TAR626G0742 Trochodendron aralioides HOM05D005265 ORTHO05D006326 2.7e-57 225.3 131 90.8
GSVIVG01021584001 Vitis vinifera HOM05D005265 ORTHO05D006326 1.3e-56 223.0 130 86.9
Oeu040090.1 Olea europaea HOM05D005265 ORTHO05D006326 5.5e-55 217.6 131 87.0
Dinv15893 Davidia involucrata HOM05D005265 ORTHO05D006326 7.2e-55 217.2 131 85.5
Duzib132G0868 Durio zibethinus HOM05D005265 ORTHO05D006326 2.1e-54 215.7 130 84.6
Gohir.D02G238400 Gossypium hirsutum HOM05D005265 ORTHO05D006326 3.6e-54 214.9 129 84.5
Gorai.005G266900 Gossypium raimondii HOM05D005265 ORTHO05D006326 3.6e-54 214.9 129 84.5
Lj1g0015817 Lotus japonicus HOM05D005265 ORTHO05D006326 3.6e-54 214.9 130 84.6
CiPaw.09G117100 Carya illinoinensis HOM05D005265 ORTHO05D006326 4.7e-54 214.5 130 84.6
Nitab4.5_0002991g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 6.1e-54 214.2 131 85.5
Nitab4.5_0003368g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 6.1e-54 214.2 131 84.7
CSS0007721 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 8.0e-54 213.8 132 83.3
CSS0016265 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 8.0e-54 213.8 132 83.3
CiPaw.10G086700 Carya illinoinensis HOM05D005265 ORTHO05D006326 1.0e-53 213.4 130 83.8
Cpa.g.sc17.68 Carica papaya HOM05D005265 ORTHO05D006326 1.4e-53 213.0 130 83.8
PSO541G2745 Papaver somniferum HOM05D005265 ORTHO05D006326 1.4e-53 213.0 129 84.5
PSO675G1042 Papaver somniferum HOM05D005265 ORTHO05D006326 1.4e-53 213.0 129 84.5
Dinv32199 Davidia involucrata HOM05D005265 ORTHO05D006326 3.0e-53 211.8 131 82.4
Glyma.15G194300 Glycine max HOM05D005265 ORTHO05D006326 3.0e-53 211.8 130 83.8
Gohir.A03G216800 Gossypium hirsutum HOM05D005265 ORTHO05D006326 3.0e-53 211.8 129 83.7
Thecc.02G010800 Theobroma cacao HOM05D005265 ORTHO05D006326 4.0e-53 211.5 130 82.3
EL10Ac7g15766 Beta vulgaris HOM05D005265 ORTHO05D006326 6.8e-53 210.7 130 82.3
CANSAT35G0137 Cannabis sativa HOM05D005265 ORTHO05D006326 6.8e-53 210.7 130 82.3
Migut.M01877 Erythranthe guttata HOM05D005265 ORTHO05D006326 6.8e-53 210.7 131 84.0
HanXRQChr04g0113581 Helianthus annuus HOM05D005265 ORTHO05D006326 6.8e-53 210.7 131 82.4
Phvul.009G216400 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 6.8e-53 210.7 130 83.1
PGR083G1323 Punica granatum HOM05D005265 ORTHO05D006326 6.8e-53 210.7 130 82.3
CAN.G1882.1 Capsicum annuum HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 83.2
Haze_05746 Corylus avellana HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 83.2
RcHm_v2.0_Chr5g0015361 Rosa chinensis HOM05D005265 ORTHO05D006326 8.9e-53 210.3 129 83.7
Aqoxy4G00026 Aquilegia oxysepala HOM05D005265 ORTHO05D006326 1.2e-52 209.9 129 82.9
arahy.Tifrunner.gnm1.ann1.9042LP Arachis hypogaea HOM05D005265 ORTHO05D006326 1.2e-52 209.9 130 81.5
DCAR_004805 Daucus carota HOM05D005265 ORTHO05D006326 1.2e-52 209.9 131 84.7
Hma1.2p1_0689F.1_g203690 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 1.2e-52 209.9 131 81.7
Hma1.2p1_1418F.1_g282220 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 1.2e-52 209.9 131 81.7
FAN16G0550 Fragaria x ananassa HOM05D005265 ORTHO05D006326 1.5e-52 209.5 129 82.9
Sopen08g002900 Solanum pennellii HOM05D005265 ORTHO05D006326 1.5e-52 209.5 131 81.7
PGSC0003DMG400020505 Solanum tuberosum HOM05D005265 ORTHO05D006326 1.5e-52 209.5 131 82.4
arahy.Tifrunner.gnm1.ann1.ZS1M1K Arachis hypogaea HOM05D005265 ORTHO05D006326 2.0e-52 209.1 130 80.8
Eucgr.D00234 Eucalyptus grandis HOM05D005265 ORTHO05D006326 2.6e-52 208.8 131 83.2
FAN25G1721 Fragaria x ananassa HOM05D005265 ORTHO05D006326 2.6e-52 208.8 131 83.2
VMungo1309G1099 Vigna mungo HOM05D005265 ORTHO05D006326 2.6e-52 208.8 130 81.5
COL.COLO4_17668 Corchorus olitorius HOM05D005265 ORTHO05D006326 3.4e-52 208.4 130 80.8
Solyc08g006930.3 Solanum lycopersicum HOM05D005265 ORTHO05D006326 3.4e-52 208.4 131 80.9
DCAR_004804 Daucus carota HOM05D005265 ORTHO05D006326 4.4e-52 208.0 131 83.2
Prupe.4G088200 Prunus persica HOM05D005265 ORTHO05D006326 4.4e-52 208.0 129 82.2
Sc24g0001600 Simmondsia chinensis HOM05D005265 ORTHO05D006326 4.4e-52 208.0 131 82.4
Peaxi162Scf00045g02242 Petunia axillaris HOM05D005265 ORTHO05D006326 5.7e-52 207.6 132 84.1
TWI09G0405 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 7.5e-52 207.2 132 81.1
Lalb_Chr08g0233241 Lupinus albus HOM05D005265 ORTHO05D006326 9.8e-52 206.8 130 80.8
MD00G1109700 Malus domestica HOM05D005265 ORTHO05D006326 9.8e-52 206.8 129 81.4
Phvul.002G140800 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 9.8e-52 206.8 130 81.5
Cc09_g08490 Coffea canephora HOM05D005265 ORTHO05D006326 1.7e-51 206.1 131 80.9
FvH4_3g09680 Fragaria vesca HOM05D005265 ORTHO05D006326 1.7e-51 206.1 131 81.7
FAN11G2263 Fragaria x ananassa HOM05D005265 ORTHO05D006326 1.7e-51 206.1 131 81.7
Cfa000859 Carpinus fangiana HOM05D005265 ORTHO05D006326 2.2e-51 205.7 131 81.7
Ciclev10017170m.g Citrus clementina HOM05D005265 ORTHO05D006326 2.2e-51 205.7 130 81.5
Nitab4.5_0001809g0020 Nicotiana tabacum HOM05D005265 ORTHO05D006326 2.2e-51 205.7 131 81.7
AUR62038135 Chenopodium quinoa HOM05D005265 ORTHO05D006326 2.8e-51 205.3 131 83.2
Manes.14G134800 Manihot esculenta HOM05D005265 ORTHO05D006326 2.8e-51 205.3 130 78.5
Nitab4.5_0000100g0280 Nicotiana tabacum HOM05D005265 ORTHO05D006326 2.8e-51 205.3 131 80.9
Sp1g26220 Schrenkiella parvula HOM05D005265 ORTHO05D006326 2.8e-51 205.3 131 83.2
Glyma.09G087700 Glycine max HOM05D005265 ORTHO05D006326 3.7e-51 204.9 129 82.9
MSTRG.7528 Avicennia marina HOM05D005265 ORTHO05D006326 4.9e-51 204.5 133 79.7
MBI02_g44634_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 4.9e-51 204.5 129 80.6
QL05p054070 Quercus lobata HOM05D005265 ORTHO05D006326 4.9e-51 204.5 130 80.0
SalBow8G5437 Salvia bowleyana HOM05D005265 ORTHO05D006326 4.9e-51 204.5 131 80.9
Duzib248G0887 Durio zibethinus HOM05D005265 ORTHO05D006326 6.3e-51 204.1 127 83.5
AT1G30380 Arabidopsis thaliana HOM05D005265 ORTHO05D006326 8.3e-51 203.8 131 81.7
MBI02_g40641_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 8.3e-51 203.8 129 80.6
Potri.006G254200 Populus trichocarpa HOM05D005265 ORTHO05D006326 8.3e-51 203.8 133 83.5
THA.LOC104814318 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 8.3e-51 203.8 133 82.7
CDE01G0641 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 1.4e-50 203.0 129 78.3
CARHR029770 Cardamine hirsuta HOM05D005265 ORTHO05D006326 1.8e-50 202.6 131 80.9
AUR62009823 Chenopodium quinoa HOM05D005265 ORTHO05D006326 1.8e-50 202.6 131 82.4
TWI73G0862 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 1.8e-50 202.6 132 79.5
BcaC01g00188 Brassica carinata HOM05D005265 ORTHO05D006326 2.4e-50 202.2 131 81.7
A08p24490 Brassica napus HOM05D005265 ORTHO05D006326 2.4e-50 202.2 131 81.7
C03p76720 Brassica napus HOM05D005265 ORTHO05D006326 2.4e-50 202.2 131 81.7
BraA08t34405Z Brassica rapa HOM05D005265 ORTHO05D006326 2.4e-50 202.2 131 81.7
BraA09t39132Z Brassica rapa HOM05D005265 ORTHO05D006326 2.4e-50 202.2 132 82.6
CDE12G0489 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 2.4e-50 202.2 129 77.5
Duzib052G0655 Durio zibethinus HOM05D005265 ORTHO05D006326 3.1e-50 201.8 131 79.4
THA.LOC104812683 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 3.1e-50 201.8 131 81.7
ECA236G4370 Erigeron canadensis HOM05D005265 ORTHO05D006326 4.1e-50 201.4 133 80.5
BcaB03g12211 Brassica carinata HOM05D005265 ORTHO05D006326 5.4e-50 201.1 131 80.9
Ca_12734_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 5.4e-50 201.1 131 79.4
Ca_12740_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 5.4e-50 201.1 131 79.4
ClCG01G025030 Citrullus lanatus HOM05D005265 ORTHO05D006326 5.4e-50 201.1 131 80.2
BcaC05g27071 Brassica carinata HOM05D005265 ORTHO05D006326 7.0e-50 200.7 132 81.8
A09p36080 Brassica napus HOM05D005265 ORTHO05D006326 7.0e-50 200.7 132 81.8
C05p29330 Brassica napus HOM05D005265 ORTHO05D006326 7.0e-50 200.7 132 81.8
BolC5t31665H Brassica oleracea HOM05D005265 ORTHO05D006326 7.0e-50 200.7 132 81.8
Manes.06G061100 Manihot esculenta HOM05D005265 ORTHO05D006326 1.2e-49 199.9 129 77.5
Sabra18G0029900 Salix brachista HOM05D005265 ORTHO05D006326 2.0e-49 199.1 131 81.7
Atru.chr10.966 Acer truncatum HOM05D005265 ORTHO05D006326 3.5e-49 198.4 130 80.0
AL1G44320 Arabidopsis lyrata HOM05D005265 ORTHO05D006326 4.5e-49 198.0 132 81.1
HanXRQChr15g0481551 Helianthus annuus HOM05D005265 ORTHO05D006326 4.5e-49 198.0 131 80.9
Ah.08g216220 Amaranthus hybridus HOM05D000506 ORTHO05D000369 5.9e-49 197.6 123 80.5
Thhalv10009090m.g Eutrema salsugineum HOM05D005265 ORTHO05D006326 7.8e-49 197.2 132 81.1
MD05G1276100 Malus domestica HOM05D005265 ORTHO05D006326 7.8e-49 197.2 136 77.2
Sed0012654 Sechium edule HOM05D005265 ORTHO05D006326 7.8e-49 197.2 131 80.9
unitig_61.g26080 Utricularia gibba HOM05D005265 ORTHO05D006326 1.3e-48 196.4 129 79.1
Potri.018G027600 Populus trichocarpa HOM05D005265 ORTHO05D006326 2.3e-48 195.7 131 80.2
Actinidia13436 Actinidia chinensis HOM05D005265 ORTHO05D006326 2.9e-48 195.3 130 78.5
BcaB07g32648 Brassica carinata HOM05D005265 ORTHO05D006326 2.9e-48 195.3 131 79.4
BolC3t19927H Brassica oleracea HOM05D005265 ORTHO05D006326 2.9e-48 195.3 130 78.5
Carub.0001s2858 Capsella rubella HOM05D005265 ORTHO05D006326 2.9e-48 195.3 131 80.9
Aa31LG6G5400 Aethionema arabicum HOM05D005265 ORTHO05D006326 5.0e-48 194.5 132 79.5
vmacro03415 Vaccinium macrocarpon HOM05D005265 ORTHO05D006326 5.0e-48 194.5 130 76.9
SGA_v2.0_scaffold223G42844 Striga asiatica HOM05D005265 ORTHO05D006326 6.6e-48 194.1 131 78.6
Medtr1g026820 Medicago truncatula HOM05D005265 ORTHO05D006326 2.5e-47 192.2 131 74.8
MELO3C007091.2 Cucumis melo HOM05D005265 ORTHO05D006326 3.3e-47 191.8 131 78.6
CsaV3_6G052210 Cucumis sativus L. HOM05D005265 ORTHO05D006326 1.6e-46 189.5 129 78.3
Actinidia33666 Actinidia chinensis HOM05D005265 ORTHO05D006326 2.1e-46 189.1 130 76.2
Lsat_1_v5_gn_7_32001 Lactuca sativa HOM05D005265 ORTHO05D006326 2.8e-46 188.7 133 76.7
ATR0681G400 Amborella trichopoda HOM05D005265 ORTHO05D006326 6.1e-46 187.6 129 75.2
Sed0026922 Sechium edule HOM05D005265 ORTHO05D006326 8.0e-46 187.2 132 76.5
FAN21G2293 Fragaria x ananassa HOM05D005265 ORTHO05D006326 4.0e-45 184.9 177 60.5
TPR.G24497 Trifolium pratense HOM05D005265 ORTHO05D006326 6.8e-45 184.1 132 74.2
Hund18717 Selenicereus undatus HOM05D005265 ORTHO05D006326 2.6e-44 182.2 136 72.8
Lalb_Chr23g0275991 Lupinus albus HOM05D005265 ORTHO05D006326 8.3e-43 177.2 103 86.4
Rhsim13G0119400 Rhododendron simsii HOM05D005265 ORTHO05D006326 8.3e-43 177.2 130 71.5
HPP92_019500 Vanilla planifolia HOM05D005265 ORTHO05D006326 8.3e-43 177.2 129 72.1
Psat0s1315g0080 Pisum sativum HOM05D005265 ORTHO05D006326 3.2e-42 175.3 162 59.9
Os07g0148900 Oryza sativa ssp. japonica HOM05D005265 ORTHO05D006326 7.0e-42 174.1 123 72.4
Zm00001eb299990 Zea mays HOM05D005265 ORTHO05D006326 1.3e-40 169.9 131 69.5
SEGI_05857 Sequoiadendron giganteum HOM05D005265 ORTHO05D006326 2.3e-37 159.1 127 66.1
Nn3g20272 Nelumbo nucifera HOM05D005265 ORTHO05D006326 4.0e-37 158.3 128 69.5
Sp4g16930 Schrenkiella parvula HOM05D005265 ORTHO05D006326 5.2e-37 157.9 133 66.2
Mapoly0125s0033 Marchantia polymorpha HOM05D005265 ORTHO05D006326 8.9e-37 157.1 127 67.7
Pp3c13_10540 Physcomitrium patens HOM05D005265 ORTHO05D006326 4.4e-36 154.8 123 65.9
Nn4g26654 Nelumbo nucifera HOM05D005265 ORTHO05D006326 7.5e-36 154.1 128 68.0
Pp3c3_10740 Physcomitrium patens HOM05D005265 ORTHO05D006326 1.3e-35 153.3 119 67.2
Pp3c13_10520 Physcomitrium patens HOM05D005265 ORTHO05D006326 2.8e-30 135.6 85 77.6
AagrBONN_evm.TU.Sc2ySwM_369.184 Anthoceros agrestis HOM05D005265 ORTHO05D006326 1.8e-29 132.9 129 58.9
CBR_g39729 Chara braunii HOM05D005265 ORTHO05D006326 7.1e-26 120.9 134 48.5
Nn8g40769 Nelumbo nucifera HOM05D005265 ORTHO05D006326 1.5e-23 113.2 67 85.1
SMO358G0410 Selaginella moellendorffii HOM05D005265 ORTHO05D006326 1.2e-22 110.2 78 71.8
Cre17.g724300 Chlamydomonas reinhardtii HOM05D005265 ORTHO05D006326 3.4e-20 102.1 105 52.4
RcHm_v2.0_Chr5g0036151 Rosa chinensis HOM05D005265 ORTHO05D006326 1.2e-12 77.0 48 79.2
MCO04G068 Micromonas commoda HOM05D005265 ORTHO05D006326 9.3e-10 67.4 78 46.2
PRCOL_00005455 Prasinoderma coloniale HOM05D005265 ORTHO05D006326 1.6e-09 66.6 92 44.6
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.6e-06 55.5 143 32.9


User provided reference genes

Program Settings