Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G1010 Trochodendron aralioides HOM05D000361 ORTHO05D007806 7.5e-71 270.4 135 100.0
TAR636G0149 Trochodendron aralioides HOM05D000361 ORTHO05D007806 1.2e-60 236.5 129 93.8
TAR636G1851 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.3e-56 222.2 129 89.1
Aqoxy4G03188 Aquilegia oxysepala HOM05D000361 ORTHO05D007806 8.9e-56 220.3 129 86.8
Dinv37251 Davidia involucrata HOM05D000361 ORTHO05D007806 4.4e-55 218.0 129 84.5
Nn2g10649 Nelumbo nucifera HOM05D000361 ORTHO05D007806 9.8e-55 216.9 129 86.0
CSS0035526 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007806 2.9e-54 215.3 124 83.1
GSVIVG01025535001 Vitis vinifera HOM05D000361 ORTHO05D007806 3.7e-54 214.9 129 85.3
CSS0036867 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007806 4.9e-54 214.5 124 83.1
Thecc.05G053700 Theobroma cacao HOM05D000361 ORTHO05D007806 1.4e-53 213.0 129 81.4
Actinidia04697 Actinidia chinensis HOM05D000361 ORTHO05D007806 2.4e-53 212.2 129 82.9
Actinidia19716 Actinidia chinensis HOM05D000361 ORTHO05D007806 2.4e-53 212.2 129 82.9
MBI14_g43289_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007806 2.4e-53 212.2 129 82.9
COL.COLO4_27084 Corchorus olitorius HOM05D000361 ORTHO05D007806 5.4e-53 211.1 129 79.8
Haze_20652 Corylus avellana HOM05D000361 ORTHO05D007806 5.4e-53 211.1 128 82.0
Cfa017506 Carpinus fangiana HOM05D000361 ORTHO05D007806 9.2e-53 210.3 121 85.1
Sed0028064 Sechium edule HOM05D000361 ORTHO05D007806 1.2e-52 209.9 129 81.4
CiPaw.09G180100 Carya illinoinensis HOM05D000361 ORTHO05D007806 2.7e-52 208.8 129 81.4
Cc06_g03540 Coffea canephora HOM05D000361 ORTHO05D007806 2.7e-52 208.8 129 79.1
Duzib128G0222 Durio zibethinus HOM05D000361 ORTHO05D007806 3.5e-52 208.4 129 79.1
vmacro20063 Vaccinium macrocarpon HOM05D000361 ORTHO05D007806 6.0e-52 207.6 122 83.6
Migut.J00416 Erythranthe guttata HOM05D000361 ORTHO05D007806 7.8e-52 207.2 129 79.8
DCAR_020872 Daucus carota HOM05D000361 ORTHO05D007806 1.0e-51 206.8 129 78.3
TWI74G0816 Tripterygium wilfordii HOM05D000361 ORTHO05D007806 1.0e-51 206.8 129 79.8
Peaxi162Scf00005g04713 Petunia axillaris HOM05D000361 ORTHO05D007806 1.7e-51 206.1 129 81.4
Gohir.D01G204700 Gossypium hirsutum HOM05D000361 ORTHO05D007806 6.6e-51 204.1 129 77.5
Gorai.002G248900 Gossypium raimondii HOM05D000361 ORTHO05D007806 6.6e-51 204.1 129 77.5
CAN.G608.18 Capsicum annuum HOM05D000361 ORTHO05D007806 8.6e-51 203.8 129 78.3
Solyc09g007330.4 Solanum lycopersicum HOM05D000361 ORTHO05D007806 8.6e-51 203.8 129 79.8
PSO339G3031 Papaver somniferum HOM05D000361 ORTHO05D007806 1.5e-50 203.0 129 79.8
Sopen09g002210 Solanum pennellii HOM05D000361 ORTHO05D007806 1.5e-50 203.0 129 79.8
Glyma.19G178600 Glycine max HOM05D000361 ORTHO05D007806 2.5e-50 202.2 129 76.7
Manes.08G003200 Manihot esculenta HOM05D000361 ORTHO05D007806 3.3e-50 201.8 129 78.3
PGR004G1754 Punica granatum HOM05D000361 ORTHO05D007806 3.3e-50 201.8 129 77.5
Sabra06G0103500 Salix brachista HOM05D000361 ORTHO05D007806 4.3e-50 201.4 129 78.3
Ca_08824_v3 Cicer arietinum L. HOM05D000361 ORTHO05D007806 5.6e-50 201.1 129 77.5
Lj1g0004431 Lotus japonicus HOM05D000361 ORTHO05D007806 5.6e-50 201.1 129 76.0
Psat3g045560 Pisum sativum HOM05D000361 ORTHO05D007806 7.3e-50 200.7 129 76.7
HanXRQChr13g0399761 Helianthus annuus HOM05D000361 ORTHO05D007806 9.5e-50 200.3 129 76.7
Potri.006G131900 Populus trichocarpa HOM05D000361 ORTHO05D007806 9.5e-50 200.3 129 79.1
Hma1.2p1_0111F.1_g053870 Hydrangea macrophylla HOM05D000361 ORTHO05D007806 1.2e-49 199.9 132 78.0
Lalb_Chr20g0112951 Lupinus albus HOM05D000361 ORTHO05D007806 1.2e-49 199.9 136 72.8
Phvul.001G174700 Phaseolus vulgaris HOM05D000361 ORTHO05D007806 2.1e-49 199.1 129 76.0
ATR1159G085 Amborella trichopoda HOM05D000361 ORTHO05D007806 2.8e-49 198.7 136 77.2
Medtr7g100680 Medicago truncatula HOM05D000361 ORTHO05D007806 2.8e-49 198.7 129 76.0
PSO063G5136 Papaver somniferum HOM05D000361 ORTHO05D007806 2.8e-49 198.7 121 81.8
Ah.08g211920 Amaranthus hybridus HOM05D000361 ORTHO05D007806 3.6e-49 198.4 123 78.0
MD04G1104500 Malus domestica HOM05D000361 ORTHO05D007806 3.6e-49 198.4 136 73.5
SHI12574 Sapria himalayana HOM05D000361 ORTHO05D007806 3.6e-49 198.4 129 76.0
Lj2C107G5 Lonicera japonica HOM05D000361 ORTHO05D007806 4.7e-49 198.0 128 78.1
AUR62042605 Chenopodium quinoa HOM05D000361 ORTHO05D007806 8.1e-49 197.2 122 77.9
Gohir.A01G215900 Gossypium hirsutum HOM05D000361 ORTHO05D007806 8.1e-49 197.2 129 74.4
Prupe.6G241500 Prunus persica HOM05D000361 ORTHO05D007806 5.2e-48 194.5 129 77.5
Ciclev10013573m.g Citrus clementina HOM05D000361 ORTHO05D007806 8.9e-48 193.7 129 76.0
SGA_v2.0_scaffold126G33895 Striga asiatica HOM05D000361 ORTHO05D007806 8.9e-48 193.7 129 74.4
TPR.G36915 Trifolium pratense HOM05D000361 ORTHO05D007806 8.9e-48 193.7 123 76.4
VMungo1383G2461 Vigna mungo HOM05D000361 ORTHO05D007806 1.2e-47 193.4 129 73.6
CANSAT80G1962 Cannabis sativa HOM05D000361 ORTHO05D007806 1.5e-47 193.0 121 76.9
arahy.Tifrunner.gnm1.ann1.C871DQ Arachis hypogaea HOM05D000361 ORTHO05D007806 2.6e-47 192.2 129 74.4
arahy.Tifrunner.gnm1.ann1.SD4I8G Arachis hypogaea HOM05D000361 ORTHO05D007806 2.6e-47 192.2 129 74.4
ECA233G2985 Erigeron canadensis HOM05D000361 ORTHO05D007806 2.6e-47 192.2 129 72.9
RcHm_v2.0_Chr3g0468711 Rosa chinensis HOM05D000361 ORTHO05D007806 4.4e-47 191.4 129 75.2
AUR62040504 Chenopodium quinoa HOM05D000361 ORTHO05D007806 5.8e-47 191.0 129 75.2
FvH4_6g15280 Fragaria vesca HOM05D000361 ORTHO05D007806 7.5e-47 190.7 129 75.2
FAN02G4129 Fragaria x ananassa HOM05D000361 ORTHO05D007806 7.5e-47 190.7 129 75.2
FAN14G3803 Fragaria x ananassa HOM05D000361 ORTHO05D007806 7.5e-47 190.7 129 75.2
HPP92_019800 Vanilla planifolia HOM05D000361 ORTHO05D007806 1.3e-46 189.9 129 72.9
Eucgr.A01177 Eucalyptus grandis HOM05D000361 ORTHO05D007806 1.7e-46 189.5 129 75.2
Nitab4.5_0001142g0060 Nicotiana tabacum HOM05D000361 ORTHO05D007806 1.7e-46 189.5 121 76.9
MELO3C009313.2 Cucumis melo HOM05D000361 ORTHO05D007806 2.9e-46 188.7 129 76.0
CsaV3_3G035520 Cucumis sativus L. HOM05D000361 ORTHO05D007806 2.9e-46 188.7 129 76.0
FAN09G3820 Fragaria x ananassa HOM05D000361 ORTHO05D007806 2.9e-46 188.7 129 74.4
FAN05G4916 Fragaria x ananassa HOM05D000361 ORTHO05D007806 3.7e-46 188.3 129 74.4
CDE04G1259 Ceratophyllum demersum HOM05D000361 ORTHO05D007806 4.9e-46 188.0 126 72.2
Lsat_1_v5_gn_6_29641 Lactuca sativa HOM05D000361 ORTHO05D007806 4.9e-46 188.0 129 74.4
Oeu029422.1 Olea europaea HOM05D000361 ORTHO05D007806 4.9e-46 188.0 157 65.0
Sc07g0006240 Simmondsia chinensis HOM05D000361 ORTHO05D007806 8.3e-46 187.2 129 74.4
ClCG10G020570 Citrullus lanatus HOM05D000361 ORTHO05D007806 1.1e-45 186.8 129 76.0
CDE04G3548 Ceratophyllum demersum HOM05D000361 ORTHO05D007806 3.2e-45 185.3 130 70.8
Nitab4.5_0009766g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007806 4.1e-45 184.9 129 71.3
QL07p045302 Quercus lobata HOM05D000361 ORTHO05D007806 7.8e-44 180.6 129 72.9
THA.LOC104816318 Tarenaya hassleriana HOM05D000361 ORTHO05D007806 7.8e-44 180.6 127 68.5
Aa31LG3G2080 Aethionema arabicum HOM05D000361 ORTHO05D007806 1.0e-43 180.3 129 70.5
BcaC05g29691 Brassica carinata HOM05D000361 ORTHO05D007806 1.0e-43 180.3 129 69.0
unitig_578.g15710 Utricularia gibba HOM05D000361 ORTHO05D007806 1.3e-43 179.9 129 69.0
BraA05t22721Z Brassica rapa HOM05D000361 ORTHO05D007806 1.7e-43 179.5 129 69.0
C05p58430 Brassica napus HOM05D000361 ORTHO05D007806 2.3e-43 179.1 129 69.0
Carub.0003s0875 Capsella rubella HOM05D000361 ORTHO05D007806 3.0e-43 178.7 129 68.2
A05p39400 Brassica napus HOM05D000361 ORTHO05D007806 3.9e-43 178.3 129 69.0
CARHR084070 Cardamine hirsuta HOM05D000361 ORTHO05D007806 5.1e-43 177.9 129 68.2
Sp3g07990 Schrenkiella parvula HOM05D000361 ORTHO05D007806 8.6e-43 177.2 129 68.2
Thhalv10020112m.g Eutrema salsugineum HOM05D000361 ORTHO05D007806 1.1e-42 176.8 129 67.4
AT3G09660 Arabidopsis thaliana HOM05D000361 ORTHO05D007806 1.9e-42 176.0 129 67.4
AL3G20870 Arabidopsis lyrata HOM05D000361 ORTHO05D007806 3.3e-42 175.3 129 66.7
RhsimUnG0118500 Rhododendron simsii HOM05D000361 ORTHO05D007806 9.5e-42 173.7 124 68.5
BolC5t34495H Brassica oleracea HOM05D000361 ORTHO05D007806 2.8e-41 172.2 137 65.0
Atru.chr8.2554 Acer truncatum HOM05D000361 ORTHO05D007806 8.1e-41 170.6 121 71.9
SEGI_29349 Sequoiadendron giganteum HOM05D000361 ORTHO05D007806 5.4e-37 157.9 124 66.9
Os05g0464100 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D007806 7.1e-37 157.5 129 61.2
SMO356G0297 Selaginella moellendorffii HOM05D000361 ORTHO05D007806 2.1e-36 156.0 129 61.2
EL10Ac7g17349 Beta vulgaris HOM05D000361 ORTHO05D007806 3.0e-35 152.1 129 62.8
Cpa.g.sc114.44 Carica papaya HOM05D000361 ORTHO05D007806 8.9e-32 140.6 97 72.2
Hund20156 Selenicereus undatus HOM05D000361 ORTHO05D007806 5.8e-31 137.9 165 49.1
Zm00001eb351640 Zea mays HOM05D000361 ORTHO05D007806 7.6e-31 137.5 129 54.3
Mapoly0006s0301 Marchantia polymorpha HOM05D000361 ORTHO05D007806 3.9e-27 125.2 129 55.0
Pp3c24_12060 Physcomitrium patens HOM05D000361 ORTHO05D007806 6.6e-27 124.4 129 54.3
AagrBONN_evm.TU.Sc2ySwM_362.2816 Anthoceros agrestis HOM05D000361 ORTHO05D007806 1.3e-25 120.2 133 52.6
Cre16.g665950 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D007806 1.9e-13 79.7 158 35.4
Cc11_g00290 Coffea canephora HOM05D002653 ORTHO05D007806 2.1e-09 66.2 35 85.7
MCO15G371 Micromonas commoda HOM05D000361 ORTHO05D007806 3.7e-09 65.5 149 31.5
Cpa.g.sc114.46 Carica papaya HOM05D000361 ORTHO05D007806 1.5e-07 60.1 68 50.0
FvH4_3g39260 Fragaria vesca HOM05D000361 ORTHO05D007806 2.9e-06 55.8 43 67.4


User provided reference genes

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