Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0963 Trochodendron aralioides HOM05D006415 ORTHO05D008549 4.8e-116 421.4 245 100.0
Nn6g35727 Nelumbo nucifera HOM05D006415 ORTHO05D008549 6.5e-89 331.3 242 75.6
MBI19_g32871_MAGBIO Magnolia biondii HOM05D006415 ORTHO05D008549 2.7e-87 325.9 245 71.4
Nn8g38521 Nelumbo nucifera HOM05D006415 ORTHO05D008549 7.4e-85 317.8 245 75.1
Aqoxy7G00937 Aquilegia oxysepala HOM05D006415 ORTHO05D008549 8.2e-84 314.3 245 72.7
Thecc.09G066900 Theobroma cacao HOM05D006415 ORTHO05D008549 9.1e-83 310.8 245 70.6
Manes.03G055400 Manihot esculenta HOM05D006415 ORTHO05D008549 1.9e-80 303.1 245 69.8
Cfa017844 Carpinus fangiana HOM05D006415 ORTHO05D008549 5.5e-80 301.6 245 70.6
Cpa.g.sc82.23 Carica papaya HOM05D006415 ORTHO05D008549 2.1e-79 299.7 245 66.5
Haze_18364 Corylus avellana HOM05D006415 ORTHO05D008549 3.6e-79 298.9 244 70.1
COL.COLO4_21174 Corchorus olitorius HOM05D006415 ORTHO05D008549 1.0e-78 297.4 245 70.2
Duzib187G1400 Durio zibethinus HOM05D006415 ORTHO05D008549 1.4e-78 297.0 245 67.8
Atru.chr7.1810 Acer truncatum HOM05D006415 ORTHO05D008549 1.8e-78 296.6 245 69.0
Potri.006G217500 Populus trichocarpa HOM05D006415 ORTHO05D008549 6.7e-78 294.7 242 67.4
TWI34G1185 Tripterygium wilfordii HOM05D006415 ORTHO05D008549 6.7e-78 294.7 236 70.8
Ciclev10010172m.g Citrus clementina HOM05D006415 ORTHO05D008549 1.5e-77 293.5 250 70.4
Duzib168G1156 Durio zibethinus HOM05D006415 ORTHO05D008549 3.3e-77 292.4 246 69.5
CiPaw.16G071700 Carya illinoinensis HOM05D006415 ORTHO05D008549 9.7e-77 290.8 245 66.1
Gorai.009G039600 Gossypium raimondii HOM05D006415 ORTHO05D008549 1.7e-76 290.0 248 66.9
Sabra06G0167700 Salix brachista HOM05D006415 ORTHO05D008549 2.2e-76 289.7 242 66.1
Gohir.D05G039100 Gossypium hirsutum HOM05D006415 ORTHO05D008549 3.7e-76 288.9 253 66.0
Duzib150G0932 Durio zibethinus HOM05D006415 ORTHO05D008549 4.8e-76 288.5 249 68.3
Gorai.013G221600 Gossypium raimondii HOM05D006415 ORTHO05D008549 4.8e-76 288.5 245 68.2
TWI32G1144 Tripterygium wilfordii HOM05D006415 ORTHO05D008549 4.8e-76 288.5 236 69.1
Gohir.A05G037600 Gossypium hirsutum HOM05D006415 ORTHO05D008549 8.2e-76 287.7 248 66.9
Gohir.D13G195500 Gossypium hirsutum HOM05D006415 ORTHO05D008549 1.4e-75 287.0 245 67.8
MELO3C016934.2 Cucumis melo HOM05D006415 ORTHO05D008549 1.8e-75 286.6 236 69.5
Sed0001226 Sechium edule HOM05D006415 ORTHO05D008549 2.4e-75 286.2 236 68.6
CsaV3_4G036270 Cucumis sativus L. HOM05D006415 ORTHO05D008549 5.3e-75 285.0 236 69.1
ClCG05G015980 Citrullus lanatus HOM05D006415 ORTHO05D008549 1.6e-74 283.5 236 66.9
PSO339G6418 Papaver somniferum HOM05D006415 ORTHO05D008549 1.6e-74 283.5 264 66.7
PSO421G0401 Papaver somniferum HOM05D006415 ORTHO05D008549 2.0e-74 283.1 264 67.8
Sed0020634 Sechium edule HOM05D006415 ORTHO05D008549 2.0e-74 283.1 236 69.9
Glyma.06G058900 Glycine max HOM05D006415 ORTHO05D008549 3.5e-74 282.3 246 66.3
MD15G1046700 Malus domestica HOM05D006415 ORTHO05D008549 3.5e-74 282.3 249 66.3
Phvul.009G084700 Phaseolus vulgaris HOM05D006415 ORTHO05D008549 4.5e-74 282.0 246 65.0
VMungo1309G0251 Vigna mungo HOM05D006415 ORTHO05D008549 7.7e-74 281.2 246 64.6
Gohir.A13G188500 Gossypium hirsutum HOM05D006415 ORTHO05D008549 1.3e-73 280.4 245 65.3
Glyma.04G058200 Glycine max HOM05D006415 ORTHO05D008549 1.7e-73 280.0 246 65.4
Manes.16G088100 Manihot esculenta HOM05D006415 ORTHO05D008549 1.7e-73 280.0 245 66.1
Ca_13084_v3 Cicer arietinum L. HOM05D006415 ORTHO05D008549 2.2e-73 279.6 237 65.8
PSO104G0181 Papaver somniferum HOM05D006415 ORTHO05D008549 2.2e-73 279.6 261 66.7
MD08G1047200 Malus domestica HOM05D006415 ORTHO05D008549 6.5e-73 278.1 248 66.5
Medtr1g014700 Medicago truncatula HOM05D006415 ORTHO05D008549 1.5e-72 276.9 237 65.4
RcHm_v2.0_Chr6g0304701 Rosa chinensis HOM05D006415 ORTHO05D008549 2.5e-72 276.2 251 62.9
Psat6g024360 Pisum sativum HOM05D006415 ORTHO05D008549 4.2e-72 275.4 246 63.0
PSO339G3229 Papaver somniferum HOM05D006415 ORTHO05D008549 5.5e-72 275.0 264 66.7
FAN20G2635 Fragaria x ananassa HOM05D006415 ORTHO05D008549 7.2e-72 274.6 251 62.5
FvH4_2g37090 Fragaria vesca HOM05D006415 ORTHO05D008549 1.2e-71 273.9 251 62.5
Lalb_Chr08g0244601 Lupinus albus HOM05D006415 ORTHO05D008549 2.1e-71 273.1 248 62.5
CDE05G3122 Ceratophyllum demersum HOM05D000036 ORTHO05D008549 2.7e-71 272.7 246 63.0
VMungo0647G0664 Vigna mungo HOM05D006415 ORTHO05D008549 2.7e-71 272.7 248 65.3
FAN27G3353 Fragaria x ananassa HOM05D006415 ORTHO05D008549 8.0e-71 271.2 251 61.4
Prupe.1G401100 Prunus persica HOM05D006415 ORTHO05D008549 1.0e-70 270.8 249 65.9
Phvul.001G043800 Phaseolus vulgaris HOM05D006415 ORTHO05D008549 3.0e-70 269.2 248 63.3
CDE05G2859 Ceratophyllum demersum HOM05D006415 ORTHO05D008549 4.0e-70 268.9 236 64.0
Eucgr.C00751 Eucalyptus grandis HOM05D006415 ORTHO05D008549 6.7e-70 268.1 245 54.7
Lalb_Chr11g0063431 Lupinus albus HOM05D006415 ORTHO05D008549 6.7e-70 268.1 244 63.1
Glyma.14G105800 Glycine max HOM05D006415 ORTHO05D008549 8.8e-70 267.7 247 62.3
Glyma.17G220600 Glycine max HOM05D006415 ORTHO05D008549 9.7e-69 264.2 247 61.9
Lj1g0019769 Lotus japonicus HOM05D006415 ORTHO05D008549 1.3e-68 263.8 248 62.9
Cc08_g07830 Coffea canephora HOM05D006415 ORTHO05D008549 2.8e-68 262.7 239 60.3
CANSAT25G1574 Cannabis sativa HOM05D006415 ORTHO05D008549 8.2e-68 261.2 236 66.5
TPR.G38916 Trifolium pratense HOM05D006415 ORTHO05D008549 1.1e-67 260.8 255 60.4
arahy.Tifrunner.gnm1.ann1.4JU4D9 Arachis hypogaea HOM05D006415 ORTHO05D008549 1.8e-67 260.0 244 58.6
arahy.Tifrunner.gnm1.ann1.FB4QQZ Arachis hypogaea HOM05D006415 ORTHO05D008549 2.4e-67 259.6 245 58.8
Lalb_Chr14g0375431 Lupinus albus HOM05D006415 ORTHO05D008549 2.4e-67 259.6 247 59.5
Lj5g0026617 Lotus japonicus HOM05D006415 ORTHO05D008549 5.3e-67 258.5 246 57.7
ATR0099G062 Amborella trichopoda HOM05D006415 ORTHO05D008549 7.7e-66 254.6 249 57.8
HPP92_028258 Vanilla planifolia HOM05D006415 ORTHO05D008549 7.7e-66 254.6 243 60.1
GSVIVG01035605001 Vitis vinifera HOM05D006415 ORTHO05D008549 7.7e-66 254.6 235 56.2
PGR142G2209 Punica granatum HOM05D006415 ORTHO05D008549 3.2e-64 249.2 249 61.8
HPP92_002171 Vanilla planifolia HOM05D006415 ORTHO05D008549 4.7e-63 245.4 238 61.3
Oeu001617.1 Olea europaea HOM05D006415 ORTHO05D008549 8.0e-63 244.6 249 57.0
SalBow4G3237 Salvia bowleyana HOM05D006415 ORTHO05D008549 2.8e-60 236.1 234 53.4
Peaxi162Scf00922g00001 Petunia axillaris HOM05D006415 ORTHO05D008549 5.4e-59 231.9 251 49.0
Migut.A00333 Erythranthe guttata HOM05D006415 ORTHO05D008549 3.8e-57 225.7 252 58.3
Nitab4.5_0000508g0110 Nicotiana tabacum HOM05D006415 ORTHO05D008549 6.5e-57 224.9 250 48.0
Os03g0399400 Oryza sativa ssp. japonica HOM05D006415 ORTHO05D008549 2.5e-56 223.0 255 52.2
SGA_v2.0_scaffold22G09921 Striga asiatica HOM05D006415 ORTHO05D008549 7.2e-56 221.5 243 47.3
Os07g0617700 Oryza sativa ssp. japonica HOM05D006415 ORTHO05D008549 1.2e-55 220.7 251 55.4
THA.LOC104803713 Tarenaya hassleriana HOM05D006415 ORTHO05D008549 6.1e-55 218.4 244 52.5
AL7G18390 Arabidopsis lyrata HOM05D006415 ORTHO05D008549 2.0e-53 213.4 255 45.5
C01p05460 Brassica napus HOM05D006415 ORTHO05D008549 5.7e-53 211.8 247 47.4
AT4G33160 Arabidopsis thaliana HOM05D006415 ORTHO05D008549 7.5e-53 211.5 254 45.7
BolC1t00526H Brassica oleracea HOM05D006415 ORTHO05D008549 7.5e-53 211.5 247 47.4
Nitab4.5_0006583g0010 Nicotiana tabacum HOM05D006415 ORTHO05D008549 2.8e-52 209.5 250 47.2
BraA01t00483Z Brassica rapa HOM05D006415 ORTHO05D008549 8.3e-52 208.0 242 45.9
A01p05010 Brassica napus HOM05D006415 ORTHO05D008549 1.1e-51 207.6 242 45.9
Carub.0007s0729 Capsella rubella HOM05D006415 ORTHO05D008549 1.4e-51 207.2 246 45.9
Sopen08g021230 Solanum pennellii HOM05D006415 ORTHO05D008549 1.4e-51 207.2 250 55.2
PGSC0003DMG400007376 Solanum tuberosum HOM05D006415 ORTHO05D008549 1.8e-51 206.8 253 45.5
CARHR241190 Cardamine hirsuta HOM05D006415 ORTHO05D008549 3.1e-51 206.1 250 48.4
CAN.G1399.1 Capsicum annuum HOM05D006415 ORTHO05D008549 1.2e-50 204.1 253 45.5
Solyc08g067300.1 Solanum lycopersicum HOM05D006415 ORTHO05D008549 2.7e-50 203.0 250 55.2
C07p59530 Brassica napus HOM05D006415 ORTHO05D008549 4.5e-50 202.2 245 51.8
A03p61850 Brassica napus HOM05D006415 ORTHO05D008549 1.3e-49 200.7 245 51.8
Thhalv10025320m.g Eutrema salsugineum HOM05D006415 ORTHO05D008549 3.8e-49 199.1 246 44.7
BolC7t46397H Brassica oleracea HOM05D006415 ORTHO05D008549 7.3e-48 194.9 247 51.4
BcaC09g52125 Brassica carinata HOM05D006415 ORTHO05D008549 8.9e-46 188.0 234 45.7
Sp7g30910 Schrenkiella parvula HOM05D006415 ORTHO05D008549 2.0e-45 186.8 240 42.5
BcaC09g52126 Brassica carinata HOM05D006415 ORTHO05D008549 1.7e-44 183.7 221 46.2
SEGI_35890 Sequoiadendron giganteum HOM05D006415 ORTHO05D008549 2.9e-44 183.0 248 47.6
SEGI_32653 Sequoiadendron giganteum HOM05D006415 ORTHO05D008549 9.2e-43 177.9 249 45.8
BcaC09g52128 Brassica carinata HOM05D006415 ORTHO05D008549 9.5e-40 167.9 198 47.0
Zm00001eb109360 Zea mays HOM05D006415 ORTHO05D008549 1.2e-34 151.0 238 43.7
BcaNung02157 Brassica carinata HOM05D006415 ORTHO05D008549 7.3e-32 141.7 257 37.7
TAR624G0126 Trochodendron aralioides HOM05D006415 ORTHO05D008549 5.2e-30 135.6 133 46.6
CDE01G0813 Ceratophyllum demersum HOM05D006415 ORTHO05D008549 5.6e-24 115.5 133 42.1
BcaC09g52124 Brassica carinata HOM05D006415 ORTHO05D008549 9.5e-24 114.8 151 45.0
unitig_747.g21890 Utricularia gibba HOM05D006415 ORTHO05D008549 1.3e-17 94.4 76 53.9
PSO675G7206 Papaver somniferum HOM05D006415 ORTHO05D019674 4.3e-16 89.4 140 37.9
PSO541G4645 Papaver somniferum HOM05D006415 ORTHO05D019674 1.2e-15 87.8 259 27.8
unitig_747.g21891 Utricularia gibba HOM05D006415 ORTHO05D008549 1.5e-13 80.9 130 39.2
PSO541G0612 Papaver somniferum HOM05D041449 ORTHO05D019674 4.6e-10 69.3 146 32.9
Aqoxy3G03119 Aquilegia oxysepala HOM05D006415 ORTHO05D019674 1.0e-09 68.2 141 31.2
HanXRQChr05g0128691 Helianthus annuus HOM05D002809 ORTHO05D004563 3.0e-09 66.6 94 28.7
Nn4g22302 Nelumbo nucifera HOM05D002809 ORTHO05D004563 5.6e-08 62.4 104 26.0
Nn3g16449 Nelumbo nucifera HOM05D002809 ORTHO05D004563 7.3e-08 62.0 104 26.0
Oeu064235.1 Olea europaea HOM05D006415 ORTHO05D008549 2.1e-07 60.5 120 30.8
Mapoly0168s0028 Marchantia polymorpha HOM05D003005 ORTHO05D007546 4.8e-07 59.3 118 27.1
Migut.K00952 Erythranthe guttata HOM05D002809 ORTHO05D004563 1.8e-06 57.4 110 24.5
Rhsim02G0109800 Rhododendron simsii HOM05D002809 ORTHO05D004563 5.3e-06 55.8 104 30.8


User provided reference genes

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