Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 9.6e-112 406.8 194 100.0
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 2.4e-94 349.0 198 83.3
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 4.1e-94 348.2 196 83.2
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 3.4e-93 345.1 197 81.7
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 4.2e-91 338.2 199 78.9
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 9.7e-88 327.0 180 85.6
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 1.3e-87 326.6 170 88.8
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 2.2e-87 325.9 181 83.4
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 2.8e-87 325.5 181 83.4
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 2.4e-86 322.4 191 80.1
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 6.9e-86 320.9 175 84.6
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 2.0e-85 319.3 175 83.4
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 2.6e-85 318.9 176 81.8
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 2.6e-85 318.9 183 80.3
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 3.4e-85 318.5 186 80.1
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 3.4e-85 318.5 182 79.7
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 4.5e-85 318.2 168 87.5
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 4.5e-85 318.2 177 84.7
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 5.9e-85 317.8 194 78.4
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 5.9e-85 317.8 189 80.4
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 1.0e-84 317.0 161 88.8
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 1.0e-84 317.0 177 82.5
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 1.0e-84 317.0 176 85.8
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 1.3e-84 316.6 177 83.1
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 1.7e-84 316.2 173 86.1
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 2.2e-84 315.8 180 81.1
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 3.8e-84 315.1 172 82.0
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 5.0e-84 314.7 172 84.9
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 5.0e-84 314.7 172 82.0
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 5.0e-84 314.7 171 85.4
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 5.0e-84 314.7 175 81.7
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 6.5e-84 314.3 179 82.7
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 8.5e-84 313.9 175 81.7
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 1.1e-83 313.5 179 81.6
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 2.5e-83 312.4 166 86.1
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 3.2e-83 312.0 180 81.1
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 3.2e-83 312.0 188 77.1
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 3.2e-83 312.0 217 71.4
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 4.2e-83 311.6 182 78.6
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 9.4e-83 310.5 160 88.1
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 2.7e-82 308.9 172 79.7
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 3.6e-82 308.5 180 80.0
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 3.6e-82 308.5 170 81.8
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 3.6e-82 308.5 165 84.2
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 4.7e-82 308.1 158 89.9
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 4.7e-82 308.1 170 81.8
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 7.9e-82 307.4 160 87.5
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 7.9e-82 307.4 161 85.7
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 7.9e-82 307.4 165 83.0
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 1.0e-81 307.0 188 77.1
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 1.4e-81 306.6 171 81.3
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 3.0e-81 305.4 181 78.5
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 5.1e-81 304.7 189 75.1
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 8.8e-81 303.9 168 85.1
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 8.8e-81 303.9 182 78.6
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 1.1e-80 303.5 157 87.9
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 1.1e-80 303.5 171 80.1
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 1.1e-80 303.5 176 80.7
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.0e-80 302.8 168 81.0
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.0e-80 302.8 168 81.0
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 2.6e-80 302.4 171 79.5
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 2.6e-80 302.4 168 81.0
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 4.4e-80 301.6 168 82.7
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.7e-80 301.2 182 76.9
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 5.7e-80 301.2 166 82.5
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 1.3e-79 300.1 166 81.9
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.3e-79 300.1 158 83.5
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 3.7e-79 298.5 176 77.8
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 2.4e-78 295.8 169 82.2
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 3.1e-78 295.4 173 79.8
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 7.0e-78 294.3 175 78.9
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 1.6e-77 293.1 172 79.7
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 2.0e-77 292.7 179 78.2
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 3.5e-77 292.0 177 77.4
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 3.5e-77 292.0 177 77.4
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 3.5e-77 292.0 177 77.4
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 4.5e-77 291.6 177 76.8
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 4.5e-77 291.6 179 76.5
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 5.9e-77 291.2 173 78.0
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 5.9e-77 291.2 173 78.0
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 7.7e-77 290.8 157 84.7
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 2.2e-76 289.3 177 75.7
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 2.9e-76 288.9 175 76.6
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 3.8e-76 288.5 184 76.1
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 8.5e-76 287.3 178 74.7
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 2.5e-75 285.8 153 85.6
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 5.5e-75 284.6 177 74.6
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 1.6e-74 283.1 149 85.9
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 1.6e-74 283.1 177 74.0
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 2.7e-74 282.3 169 79.9
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 3.6e-74 282.0 180 75.6
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 2.6e-72 275.8 164 80.5
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 3.2e-67 258.8 168 71.4
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 1.2e-66 256.9 160 71.2
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 3.6e-66 255.4 154 76.6
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 7.5e-64 247.7 135 85.9
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 2.2e-63 246.1 129 86.0
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 1.2e-58 230.3 136 77.9
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 6.3e-55 218.0 155 61.3
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 1.1e-54 217.2 116 85.3
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.0e-52 208.4 168 61.3
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 7.3e-51 204.5 106 88.7
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.8e-49 199.9 119 74.8
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 1.5e-43 180.3 130 65.4
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 8.9e-41 171.0 180 52.2
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 3.6e-34 149.1 169 45.0
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 3.2e-30 136.0 84 73.8
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 1.1e-25 120.9 181 40.9
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.4e-14 84.0 42 85.7
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 2.4e-14 83.2 45 82.2
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 1.5e-08 63.9 44 68.2


User provided reference genes

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