Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0933 Trochodendron aralioides HOM05D025013 ORTHO05D025788 1.4e-83 312.8 148 100.0
TAR362G0370 Trochodendron aralioides HOM05D000351 ORTHO05D000250 5.8e-24 114.8 62 91.9
TAR362G1213 Trochodendron aralioides HOM05D000351 ORTHO05D000250 1.7e-23 113.2 57 96.5
TAR633G0228 Trochodendron aralioides HOM05D000351 ORTHO05D000250 1.1e-19 100.5 56 87.5
TAR622G0375 Trochodendron aralioides HOM05D025013 ORTHO05D025788 2.6e-16 89.4 46 91.3
MBI18_g03856_MAGBIO Magnolia biondii HOM05D000351 ORTHO05D000250 3.4e-16 89.0 57 73.7
MBI18_g06814_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.1e-13 79.7 57 68.4
MBI18_g40469_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.1e-13 79.7 57 68.4
MBI09_g45351_MAGBIO Magnolia biondii HOM05D025013 ORTHO05D025788 7.8e-13 77.8 57 64.9
Nn4g25314 Nelumbo nucifera HOM05D000351 ORTHO05D000250 1.0e-12 77.4 55 76.4
MBI09_g45352_MAGBIO Magnolia biondii HOM05D025013 ORTHO05D025788 1.3e-12 77.0 57 63.2
Lj4g0002535 Lotus japonicus HOM05D000351 ORTHO05D000250 1.4e-09 67.0 57 59.6
Medtr4g124320 Medicago truncatula HOM05D000351 ORTHO05D000250 2.4e-09 66.2 61 60.7
QL06p014797 Quercus lobata HOM05D025013 ORTHO05D025788 4.0e-09 65.5 57 59.6
TPR.G12702 Trifolium pratense HOM05D000351 ORTHO05D000250 4.0e-09 65.5 57 57.9
Ca_21360_v3 Cicer arietinum L. HOM05D000351 ORTHO05D000250 5.2e-09 65.1 57 57.9
Prupe.1G208600 Prunus persica HOM05D000351 ORTHO05D000250 1.2e-08 63.9 69 55.1
TWI56G1081 Tripterygium wilfordii HOM05D000351 ORTHO05D000250 1.5e-08 63.5 62 51.6
PSO761G0032 Papaver somniferum HOM05D000351 ORTHO05D000250 4.4e-08 62.0 62 56.5
Dinv30956 Davidia involucrata HOM05D000351 ORTHO05D000250 5.8e-08 61.6 60 61.7
Glyma.13G117000 Glycine max HOM05D000351 ORTHO05D000250 5.8e-08 61.6 59 59.3
PSO210G5070 Papaver somniferum HOM05D000351 ORTHO05D000250 7.6e-08 61.2 62 56.5
Prupe.6G303200 Prunus persica HOM05D000351 ORTHO05D000250 7.6e-08 61.2 63 55.6
CANSAT54G1472 Cannabis sativa HOM05D000351 ORTHO05D000250 9.9e-08 60.8 62 56.5
Lj2g0007710 Lotus japonicus HOM05D000351 ORTHO05D000250 9.9e-08 60.8 57 59.6
Glyma.17G042900 Glycine max HOM05D000351 ORTHO05D000250 1.7e-07 60.1 59 57.6
Phvul.003G124700 Phaseolus vulgaris HOM05D000351 ORTHO05D000250 2.2e-07 59.7 61 57.4
Lalb_Chr12g0200471 Lupinus albus HOM05D000351 ORTHO05D000250 3.8e-07 58.9 57 57.9
Aqoxy2G02415 Aquilegia oxysepala HOM05D000351 ORTHO05D000250 4.9e-07 58.5 68 54.4
CiPaw.01G000800 Carya illinoinensis HOM05D000351 ORTHO05D000250 4.9e-07 58.5 66 57.6
Haze_15011 Corylus avellana HOM05D000351 ORTHO05D000250 4.9e-07 58.5 66 57.6
Cpa.g.sc48.227 Carica papaya HOM05D000351 ORTHO05D000250 6.4e-07 58.2 61 55.7
MD13G1136800 Malus domestica HOM05D000351 ORTHO05D000250 6.4e-07 58.2 71 52.1
arahy.Tifrunner.gnm1.ann1.FC7X90 Arachis hypogaea HOM05D000351 ORTHO05D000250 8.4e-07 57.8 53 58.5
arahy.Tifrunner.gnm1.ann1.ZIW1BH Arachis hypogaea HOM05D000351 ORTHO05D000250 8.4e-07 57.8 53 58.5
Eucgr.B02195 Eucalyptus grandis HOM05D000351 ORTHO05D000250 8.4e-07 57.8 52 53.8
Hma1.2p1_0759F.1_g213790 Hydrangea macrophylla HOM05D000351 ORTHO05D000250 8.4e-07 57.8 54 57.4
Hma1.2p1_0759F.1_g213823 Hydrangea macrophylla HOM05D000351 ORTHO05D000250 8.4e-07 57.8 54 57.4
Atru.chr4.3192 Acer truncatum HOM05D000351 ORTHO05D000250 1.1e-06 57.4 55 54.5
CSS0017027 Camellia sinensis var. sinensis HOM05D000351 ORTHO05D000250 1.1e-06 57.4 58 58.6
THA.LOC104802770 Tarenaya hassleriana HOM05D000351 ORTHO05D000250 1.4e-06 57.0 63 52.4
MD16G1132100 Malus domestica HOM05D000351 ORTHO05D000250 2.4e-06 56.2 71 49.3
VMungo1215G2899 Vigna mungo HOM05D000351 ORTHO05D000250 3.2e-06 55.8 54 55.6
Actinidia11696 Actinidia chinensis HOM05D000351 ORTHO05D000250 4.2e-06 55.5 44 63.6
AUR62002521 Chenopodium quinoa HOM05D000351 ORTHO05D000250 4.2e-06 55.5 59 55.9
AUR62023673 Chenopodium quinoa HOM05D000351 ORTHO05D000250 4.2e-06 55.5 59 55.9
RcHm_v2.0_Chr1g0328041 Rosa chinensis HOM05D000351 ORTHO05D011522 4.2e-06 55.5 62 50.0
RcHm_v2.0_Chr4g0428041 Rosa chinensis HOM05D000351 ORTHO05D000250 4.2e-06 55.5 67 53.7
Actinidia22850 Actinidia chinensis HOM05D000351 ORTHO05D000250 5.4e-06 55.1 58 56.9
Actinidia27723 Actinidia chinensis HOM05D000351 ORTHO05D011522 5.4e-06 55.1 58 56.9
PGR031G3616 Punica granatum HOM05D000351 ORTHO05D000250 5.4e-06 55.1 63 57.1
FAN17G0391 Fragaria x ananassa HOM05D000351 ORTHO05D000250 7.1e-06 54.7 67 53.7
Cfa004397 Carpinus fangiana HOM05D000351 ORTHO05D000250 9.2e-06 54.3 66 54.5
Dinv24524 Davidia involucrata HOM05D000351 ORTHO05D000250 9.2e-06 54.3 60 51.7
Gohir.A13G182400 Gossypium hirsutum HOM05D000351 ORTHO05D000250 9.2e-06 54.3 62 51.6
Gohir.D13G184900 Gossypium hirsutum HOM05D000351 ORTHO05D000250 9.2e-06 54.3 62 51.6
Gorai.013G211000 Gossypium raimondii HOM05D000351 ORTHO05D000250 9.2e-06 54.3 62 51.6


User provided reference genes

Program Settings