Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.8e-90 335.9 171 100.0
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 8.6e-80 300.4 171 85.4
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.2e-78 296.6 171 84.8
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.4e-77 293.1 171 83.0
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.4e-77 293.1 171 83.0
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.8e-77 292.7 168 85.1
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 5.2e-77 291.2 171 83.0
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 5.2e-77 291.2 171 87.7
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 6.8e-77 290.8 168 84.5
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 1.2e-76 290.0 171 82.5
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.5e-76 289.7 168 83.9
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 3.4e-76 288.5 171 82.5
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 9.8e-76 287.0 168 80.4
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 9.8e-76 287.0 168 83.3
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.7e-75 286.2 166 83.7
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 2.8e-75 285.4 168 82.1
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 3.7e-75 285.0 171 80.1
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 6.3e-75 284.3 169 82.2
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 1.1e-74 283.5 168 82.1
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 2.4e-74 282.3 168 81.5
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.2e-74 282.0 168 81.5
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 9.2e-74 280.4 167 80.8
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.2e-73 280.0 172 81.4
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 1.2e-73 280.0 166 86.1
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 2.0e-73 279.3 171 79.5
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 2.0e-73 279.3 168 81.0
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 2.7e-73 278.9 172 80.2
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 2.7e-73 278.9 168 77.4
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 3.5e-73 278.5 171 78.4
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 3.5e-73 278.5 170 79.4
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 5.9e-73 277.7 171 78.4
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 7.8e-73 277.3 171 78.9
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 1.3e-72 276.6 166 85.5
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 2.3e-72 275.8 166 79.5
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 2.9e-72 275.4 172 79.1
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 3.9e-72 275.0 172 78.5
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 3.9e-72 275.0 172 78.5
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 6.6e-72 274.2 166 84.9
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 8.6e-72 273.9 165 84.2
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 8.6e-72 273.9 167 84.4
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 1.5e-71 273.1 168 81.0
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 1.5e-71 273.1 168 79.8
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.9e-71 272.7 171 78.4
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 2.5e-71 272.3 168 79.2
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 3.3e-71 271.9 166 83.7
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 4.3e-71 271.6 165 83.6
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 4.3e-71 271.6 169 78.7
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 5.6e-71 271.2 166 83.7
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 5.6e-71 271.2 167 77.8
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 9.5e-71 270.4 167 79.6
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.2e-70 270.0 170 77.1
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.2e-70 270.0 168 78.6
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.1e-70 269.2 166 82.5
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.1e-70 269.2 166 82.5
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 2.8e-70 268.9 173 76.9
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.8e-70 268.9 165 78.8
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.8e-70 268.9 165 78.2
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 2.8e-70 268.9 166 82.5
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 3.6e-70 268.5 164 78.7
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 6.1e-70 267.7 168 78.6
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 1.0e-69 266.9 171 77.2
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.0e-69 266.9 170 76.5
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 1.0e-69 266.9 164 82.9
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 1.8e-69 266.2 174 76.4
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 2.3e-69 265.8 166 81.9
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 2.3e-69 265.8 168 79.2
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.1e-69 265.4 153 83.7
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 4.0e-69 265.0 174 75.9
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 4.0e-69 265.0 155 81.3
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 8.9e-69 263.8 165 77.0
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 1.2e-68 263.5 176 74.4
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.5e-68 263.1 168 74.4
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 2.6e-68 262.3 166 76.5
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 3.4e-68 261.9 174 74.7
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 7.5e-68 260.8 153 81.0
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 7.5e-68 260.8 174 75.9
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 7.5e-68 260.8 168 74.4
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 9.8e-68 260.4 168 75.6
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.3e-67 260.0 155 80.0
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 3.7e-67 258.5 168 74.4
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 4.1e-66 255.0 162 77.2
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 4.6e-65 251.5 160 77.5
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 6.0e-65 251.1 192 67.7
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 6.0e-65 251.1 162 76.5
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 1.7e-64 249.6 168 75.0
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.7e-64 249.6 151 84.1
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 3.9e-64 248.4 151 83.4
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 5.0e-64 248.1 168 74.4
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 6.6e-64 247.7 153 82.4
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.5e-63 246.5 151 78.1
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.5e-63 246.5 166 72.9
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 2.5e-63 245.7 161 73.9
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.3e-63 245.4 151 82.8
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 3.3e-63 245.4 165 73.3
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 4.3e-63 245.0 166 74.7
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 5.6e-63 244.6 161 73.9
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 7.3e-63 244.2 169 69.2
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 2.8e-62 242.3 155 73.5
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 4.7e-62 241.5 172 70.3
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 3.4e-60 235.3 166 70.5
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.8e-60 234.6 162 70.4
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 1.3e-59 233.4 164 70.1
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 4.9e-59 231.5 189 62.4
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.4e-58 229.9 139 77.0
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.4e-58 229.9 139 77.0
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 3.2e-58 228.8 163 70.6
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 1.5e-55 219.9 167 70.1
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.6e-54 216.5 317 42.6
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 6.2e-54 214.5 156 65.4
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 8.9e-53 210.7 180 61.7
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 8.9e-53 210.7 141 76.6
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 3.7e-51 205.3 134 76.1
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 1.9e-50 203.0 157 64.3
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 3.2e-50 202.2 155 62.6
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 4.1e-50 201.8 155 60.6
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 5.4e-50 201.4 125 77.6
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 9.2e-50 200.7 142 70.4
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 2.0e-44 183.0 113 76.1
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 8.4e-43 177.6 281 42.7
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.6e-41 173.3 232 47.4
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 7.8e-41 171.0 171 58.5
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 9.3e-34 147.5 204 44.1
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 3.1e-29 132.5 84 79.8
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.0e-25 118.2 74 74.3
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 4.3e-23 112.1 72 75.0
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 2.6e-20 102.8 66 74.2
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 1.9e-15 86.7 82 50.0
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 6.9e-13 78.2 82 50.0
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 7.6e-12 74.7 67 53.7
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 3.8e-11 72.4 81 53.1
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 1.6e-09 67.0 42 66.7
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.8e-08 63.5 39 71.8
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 6.7e-08 61.6 39 71.8


User provided reference genes

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