Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0863 Trochodendron aralioides HOM05D002105 ORTHO05D001271 4.3e-75 284.6 151 100.0
TAR671G0001 Trochodendron aralioides HOM05D002105 ORTHO05D001271 1.3e-26 123.6 94 71.3
TAR627G1018 Trochodendron aralioides HOM05D002105 ORTHO05D001271 2.2e-26 122.9 95 69.5
TAR626G1709 Trochodendron aralioides HOM05D002105 ORTHO05D001271 2.1e-21 106.3 94 67.0
QL08p022033 Quercus lobata HOM05D002105 ORTHO05D001271 5.7e-19 98.2 118 53.4
Aqoxy1G02397 Aquilegia oxysepala HOM05D002105 ORTHO05D001271 9.7e-19 97.4 75 65.3
PSO675G3374 Papaver somniferum HOM05D002105 ORTHO05D001271 9.1e-17 90.9 105 53.3
Thecc.07G090000 Theobroma cacao HOM05D002105 ORTHO05D001271 2.6e-16 89.4 81 58.0
FAN25G0802 Fragaria x ananassa HOM05D002105 ORTHO05D001271 3.5e-16 89.0 83 57.8
Oeu005407.1 Olea europaea HOM05D002105 ORTHO05D001271 3.5e-16 89.0 97 57.7
Gohir.D05G354300 Gossypium hirsutum HOM05D002105 ORTHO05D001271 4.5e-16 88.6 94 52.1
FAN11G1959 Fragaria x ananassa HOM05D002105 ORTHO05D001271 1.0e-15 87.4 81 58.0
PSO541G4007 Papaver somniferum HOM05D002105 ORTHO05D001271 1.0e-15 87.4 105 52.4
FAN16G0257 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.9e-15 85.9 81 56.8
FAN21G0480 Fragaria x ananassa HOM05D002105 ORTHO05D001271 3.8e-15 85.5 81 56.8
CiPaw.11G170100 Carya illinoinensis HOM05D002105 ORTHO05D001271 6.5e-15 84.7 92 54.3
FvH4_3g19880 Fragaria vesca HOM05D002105 ORTHO05D001271 6.5e-15 84.7 81 56.8
Lj8A155G95 Lonicera japonica HOM05D002105 ORTHO05D001271 8.5e-15 84.3 77 57.1
Oeu019314.1 Olea europaea HOM05D002105 ORTHO05D001271 1.5e-14 83.6 100 49.0
Prupe.4G180600 Prunus persica HOM05D002105 ORTHO05D001271 1.9e-14 83.2 98 56.1
MD11G1247800 Malus domestica HOM05D002105 ORTHO05D001271 9.4e-14 80.9 87 54.0
Oeu051068.1 Olea europaea HOM05D002105 ORTHO05D001271 9.4e-14 80.9 94 51.1
Sabra16G0261900 Salix brachista HOM05D002105 ORTHO05D001271 1.6e-13 80.1 79 54.4
Gorai.009G386100 Gossypium raimondii HOM05D002105 ORTHO05D001271 4.7e-13 78.6 97 48.5
RcHm_v2.0_Chr5g0033561 Rosa chinensis HOM05D002105 ORTHO05D001271 1.4e-12 77.0 81 54.3
Cpa.g.sc80.68 Carica papaya HOM05D002105 ORTHO05D001271 1.8e-12 76.6 80 52.5
Gohir.A02G080501 Gossypium hirsutum HOM05D002105 ORTHO05D001271 2.3e-12 76.3 89 50.6
MD03G1228300 Malus domestica HOM05D002105 ORTHO05D001271 2.3e-12 76.3 76 55.3
Hma1.2p1_0898F.1_g234460 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 3.0e-12 75.9 81 58.0
Phvul.005G072500 Phaseolus vulgaris HOM05D002105 ORTHO05D001271 5.2e-12 75.1 82 52.4
Psat5g243840 Pisum sativum HOM05D002105 ORTHO05D001271 1.5e-11 73.6 90 51.1
Gorai.009G386900 Gossypium raimondii HOM05D002105 ORTHO05D001271 2.0e-11 73.2 91 49.5
Cfa020580 Carpinus fangiana HOM05D002105 ORTHO05D001271 2.6e-11 72.8 66 57.6
CiPaw.12G118700 Carya illinoinensis HOM05D002105 ORTHO05D001271 4.4e-11 72.0 91 49.5
Gorai.009G386800 Gossypium raimondii HOM05D002105 ORTHO05D001271 5.7e-11 71.6 99 46.5
TWI38G1694 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 9.7e-11 70.9 93 48.4
Sabra11G0104100 Salix brachista HOM05D002105 ORTHO05D001271 1.3e-10 70.5 66 56.1
Gohir.A01G063400 Gossypium hirsutum HOM05D002105 ORTHO05D001271 2.8e-10 69.3 88 48.9
Gohir.D01G049800 Gossypium hirsutum HOM05D002105 ORTHO05D001271 2.8e-10 69.3 88 48.9
Migut.H01943 Erythranthe guttata HOM05D002105 ORTHO05D001271 3.7e-10 68.9 92 40.2
SalBow7G0487 Salvia bowleyana HOM05D002105 ORTHO05D001271 3.7e-10 68.9 86 45.3
Duzib170G0794 Durio zibethinus HOM05D002105 ORTHO05D001271 1.1e-09 67.4 49 63.3
DCAR_019557 Daucus carota HOM05D002105 ORTHO05D001271 1.4e-09 67.0 99 48.5
Lalb_Chr20g0109631 Lupinus albus HOM05D002105 ORTHO05D001271 3.1e-09 65.9 95 45.3
VMungo1080G0407 Vigna mungo HOM05D002105 ORTHO05D001271 3.1e-09 65.9 89 48.3
unitig_747.g21573 Utricularia gibba HOM05D002105 ORTHO05D001271 4.1e-09 65.5 103 47.6
CANSAT56G3600 Cannabis sativa HOM05D002105 ORTHO05D001271 5.3e-09 65.1 58 53.4
AL7G25270 Arabidopsis lyrata HOM05D002105 ORTHO05D001271 7.0e-09 64.7 104 46.2
Medtr4g132200 Medicago truncatula HOM05D002105 ORTHO05D001271 7.0e-09 64.7 98 43.9
CSS0000814 Camellia sinensis var. sinensis HOM05D002105 ORTHO05D001271 1.2e-08 63.9 54 57.4
Potri.001G399400 Populus trichocarpa HOM05D002105 ORTHO05D001271 1.2e-08 63.9 52 61.5
Lj3g0009937 Lotus japonicus HOM05D002105 ORTHO05D001271 1.6e-08 63.5 77 48.1
Potri.011G119700 Populus trichocarpa HOM05D002105 ORTHO05D001271 1.6e-08 63.5 60 55.0
Ca_01848_v3 Cicer arietinum L. HOM05D002105 ORTHO05D001271 2.0e-08 63.2 86 50.0
SGA_v2.0_scaffold73G24261 Striga asiatica HOM05D002105 ORTHO05D001271 2.0e-08 63.2 91 42.9
arahy.Tifrunner.gnm1.ann1.E3CL15 Arachis hypogaea HOM05D002105 ORTHO05D001271 3.5e-08 62.4 96 39.6
Gorai.002G069700 Gossypium raimondii HOM05D002105 ORTHO05D001271 3.5e-08 62.4 100 42.0
Medtr2g085330 Medicago truncatula HOM05D002105 ORTHO05D001271 3.5e-08 62.4 92 44.6
ClCG11G018050 Citrullus lanatus HOM05D002105 ORTHO05D001271 4.5e-08 62.0 109 41.3
Lalb_Chr25g0286341 Lupinus albus HOM05D002105 ORTHO05D001271 5.9e-08 61.6 99 44.4
COL.COLO4_27176 Corchorus olitorius HOM05D002105 ORTHO05D001271 7.7e-08 61.2 47 61.7
Manes.03G109600 Manihot esculenta HOM05D002105 ORTHO05D001271 7.7e-08 61.2 71 47.9
Glyma.12G224800 Glycine max HOM05D002105 ORTHO05D001271 1.3e-07 60.5 87 40.2
PGR083G2752 Punica granatum HOM05D002105 ORTHO05D001271 1.7e-07 60.1 90 40.0
Sed0025666 Sechium edule HOM05D002105 ORTHO05D001271 2.2e-07 59.7 98 41.8
arahy.Tifrunner.gnm1.ann1.92S0K9 Arachis hypogaea HOM05D002105 ORTHO05D001271 2.9e-07 59.3 94 38.3
CsaV3_4G033670 Cucumis sativus L. HOM05D002105 ORTHO05D001271 2.9e-07 59.3 88 47.7
TWI39G0142 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 2.9e-07 59.3 95 44.2
Carub.0007s1335 Capsella rubella HOM05D002105 ORTHO05D001271 3.8e-07 58.9 86 48.8
Nitab4.5_0002383g0030 Nicotiana tabacum HOM05D002105 ORTHO05D001271 3.8e-07 58.9 95 43.2
TPR.G39006 Trifolium pratense HOM05D002105 ORTHO05D001271 5.0e-07 58.5 66 48.5
Sed0026326 Sechium edule HOM05D002105 ORTHO05D001271 6.5e-07 58.2 47 57.4
SGA_v2.0_scaffold34G13814 Striga asiatica HOM05D002105 ORTHO05D001271 1.5e-06 57.0 86 41.9
HPP92_028219 Vanilla planifolia HOM05D002105 ORTHO05D001271 1.5e-06 57.0 80 41.2
AUR62039203 Chenopodium quinoa HOM05D002105 ORTHO05D001271 1.9e-06 56.6 79 40.5
HPP92_024062 Vanilla planifolia HOM05D002105 ORTHO05D001271 1.9e-06 56.6 94 43.6
ATR0737G090 Amborella trichopoda HOM05D002105 ORTHO05D001271 2.5e-06 56.2 106 37.7
Nitab4.5_0000207g0080 Nicotiana tabacum HOM05D002105 ORTHO05D001271 2.5e-06 56.2 97 40.2
Sp7g25440 Schrenkiella parvula HOM05D002105 ORTHO05D001271 3.2e-06 55.8 48 64.6
DCAR_020991 Daucus carota HOM05D002105 ORTHO05D001271 4.2e-06 55.5 100 42.0
CARHR235180 Cardamine hirsuta HOM05D002105 ORTHO05D001271 5.5e-06 55.1 86 46.5
Lalb_Chr19g0134171 Lupinus albus HOM05D002105 ORTHO05D001271 5.5e-06 55.1 103 36.9
Lj1C842G6 Lonicera japonica HOM05D002105 ORTHO05D001271 7.2e-06 54.7 43 67.4
Hma1.2p1_0531F.1_g173370 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 9.4e-06 54.3 57 49.1
MBI07_g30189_MAGBIO Magnolia biondii HOM05D002105 ORTHO05D001271 9.4e-06 54.3 72 50.0


User provided reference genes

Program Settings