Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0825 Trochodendron aralioides HOM05D002538 ORTHO05D003162 2.8e-52 208.4 109 100.0
TAR626G1005 Trochodendron aralioides HOM05D002538 ORTHO05D003162 8.0e-39 163.7 105 84.8
Nn1g04247 Nelumbo nucifera HOM05D002538 ORTHO05D003162 1.4e-38 162.9 105 83.8
TAR627G0078 Trochodendron aralioides HOM05D002538 ORTHO05D003162 9.7e-37 156.8 107 81.3
TAR627G0221 Trochodendron aralioides HOM05D002538 ORTHO05D003162 9.7e-37 156.8 107 81.3
Nn1g06401 Nelumbo nucifera HOM05D002538 ORTHO05D003162 3.7e-36 154.8 105 81.0
Dinv17362 Davidia involucrata HOM05D002538 ORTHO05D003162 3.2e-32 141.7 105 73.3
Dinv40607 Davidia involucrata HOM05D002538 ORTHO05D003162 5.5e-32 141.0 105 74.3
Solyc10g008950.3 Solanum lycopersicum HOM05D002538 ORTHO05D003162 2.7e-31 138.7 105 70.5
Sopen10g004740 Solanum pennellii HOM05D002538 ORTHO05D003162 2.7e-31 138.7 105 70.5
Lj1C1200G23 Lonicera japonica HOM05D002538 ORTHO05D003162 4.7e-31 137.9 105 70.5
PGSC0003DMG400022833 Solanum tuberosum HOM05D002538 ORTHO05D003162 6.1e-31 137.5 105 69.5
Hma1.2p1_0206F.1_g087630 Hydrangea macrophylla HOM05D002538 ORTHO05D003162 8.0e-31 137.1 105 74.3
Aqoxy4G00604 Aquilegia oxysepala HOM05D002538 ORTHO05D003162 1.0e-30 136.7 104 69.2
CANSAT35G0219 Cannabis sativa HOM05D002538 ORTHO05D003162 2.3e-30 135.6 104 67.3
Rhsim02G0135500 Rhododendron simsii HOM05D002538 ORTHO05D003162 2.3e-30 135.6 105 72.4
ClCG00G002770 Citrullus lanatus HOM05D002538 ORTHO05D003162 3.0e-30 135.2 105 68.6
ClCG01G023320 Citrullus lanatus HOM05D002538 ORTHO05D003162 3.0e-30 135.2 105 68.6
MELO3C007254.2 Cucumis melo HOM05D002538 ORTHO05D003162 6.8e-30 134.0 105 66.7
Nitab4.5_0003315g0010 Nicotiana tabacum HOM05D002538 ORTHO05D003162 6.8e-30 134.0 105 68.6
Prupe.4G053400 Prunus persica HOM05D002538 ORTHO05D003162 6.8e-30 134.0 104 72.1
CSS0021581 Camellia sinensis var. sinensis HOM05D002538 ORTHO05D003162 8.8e-30 133.7 105 66.7
Duzib235G1107 Durio zibethinus HOM05D002538 ORTHO05D003162 1.2e-29 133.3 105 69.5
MD05G1309600 Malus domestica HOM05D002538 ORTHO05D003162 1.5e-29 132.9 103 71.8
vmacro15938 Vaccinium macrocarpon HOM05D002538 ORTHO05D003162 1.5e-29 132.9 105 71.4
Haze_06366 Corylus avellana HOM05D002538 ORTHO05D003162 3.4e-29 131.7 105 69.5
ECA236G0316 Erigeron canadensis HOM05D002538 ORTHO05D003162 3.4e-29 131.7 106 65.1
PSO210G7643 Papaver somniferum HOM05D002538 ORTHO05D003162 3.4e-29 131.7 108 69.4
Peaxi162Scf00490g00311 Petunia axillaris HOM05D002538 ORTHO05D003162 3.4e-29 131.7 105 69.5
Nitab4.5_0006826g0020 Nicotiana tabacum HOM05D002538 ORTHO05D003162 4.4e-29 131.3 105 67.6
QL05p042992 Quercus lobata HOM05D002538 ORTHO05D003162 4.4e-29 131.3 105 69.5
Nitab4.5_0007082g0020 Nicotiana tabacum HOM05D002538 ORTHO05D003162 5.7e-29 131.0 105 68.6
Nitab4.5_0001955g0010 Nicotiana tabacum HOM05D002538 ORTHO05D003162 9.8e-29 130.2 105 68.6
Duzib192G0543 Durio zibethinus HOM05D002538 ORTHO05D003162 1.3e-28 129.8 104 71.2
PSO832G0299 Papaver somniferum HOM05D002538 ORTHO05D003162 1.7e-28 129.4 107 69.2
Rhsim13G0180600 Rhododendron simsii HOM05D002538 ORTHO05D003162 2.2e-28 129.0 105 67.6
vmacro03901 Vaccinium macrocarpon HOM05D002538 ORTHO05D003162 2.2e-28 129.0 105 65.7
CsaV3_6G050460 Cucumis sativus L. HOM05D002538 ORTHO05D003162 2.8e-28 128.6 105 66.7
Cfa000535 Carpinus fangiana HOM05D002538 ORTHO05D003162 3.7e-28 128.3 105 68.6
FvH4_3g08471 Fragaria vesca HOM05D002538 ORTHO05D003162 3.7e-28 128.3 104 69.2
FAN11G3059 Fragaria x ananassa HOM05D002538 ORTHO05D003162 3.7e-28 128.3 104 69.2
RcHm_v2.0_Chr5g0009341 Rosa chinensis HOM05D002538 ORTHO05D003162 3.7e-28 128.3 104 71.2
CSS0006869 Camellia sinensis var. sinensis HOM05D002538 ORTHO05D003162 4.8e-28 127.9 105 67.6
FAN21G0308 Fragaria x ananassa HOM05D002538 ORTHO05D003162 6.3e-28 127.5 104 69.2
FAN25G0596 Fragaria x ananassa HOM05D002538 ORTHO05D003162 6.3e-28 127.5 104 69.2
Cc02_g14020 Coffea canephora HOM05D002538 ORTHO05D003162 8.3e-28 127.1 105 64.8
Thecc.06G180200 Theobroma cacao HOM05D002538 ORTHO05D003162 1.1e-27 126.7 105 69.5
Duzib160G0687 Durio zibethinus HOM05D002538 ORTHO05D003162 1.8e-27 125.9 105 69.5
Manes.17G050000 Manihot esculenta HOM05D002538 ORTHO05D003162 2.4e-27 125.6 105 67.6
CiPaw.10G053200 Carya illinoinensis HOM05D002538 ORTHO05D003162 3.1e-27 125.2 105 66.7
CDE09G0660 Ceratophyllum demersum HOM05D002538 ORTHO05D003162 4.1e-27 124.8 105 68.6
DCAR_024895 Daucus carota HOM05D002538 ORTHO05D003162 4.1e-27 124.8 105 66.7
Gohir.D10G028700 Gossypium hirsutum HOM05D002538 ORTHO05D003162 4.1e-27 124.8 105 68.6
CiPaw.09G064200 Carya illinoinensis HOM05D002538 ORTHO05D003162 7.0e-27 124.0 104 66.3
COL.COLO4_31408 Corchorus olitorius HOM05D002538 ORTHO05D003162 7.0e-27 124.0 105 66.7
Gorai.011G030500 Gossypium raimondii HOM05D002538 ORTHO05D003162 7.0e-27 124.0 105 68.6
Manes.16G032600 Manihot esculenta HOM05D002538 ORTHO05D003162 7.0e-27 124.0 105 66.7
CAN.G813.6 Capsicum annuum HOM05D002538 ORTHO05D003162 9.1e-27 123.6 107 67.3
Gohir.A10G028300 Gossypium hirsutum HOM05D002538 ORTHO05D003162 9.1e-27 123.6 105 68.6
Eucgr.C03068 Eucalyptus grandis HOM05D002538 ORTHO05D003162 1.7e-25 119.4 104 60.6
PGR004G1187 Punica granatum HOM05D002538 ORTHO05D003162 1.7e-25 119.4 104 62.5
Sed0000642 Sechium edule HOM05D002538 ORTHO05D003162 1.7e-25 119.4 105 63.8
CAN.G529.62 Capsicum annuum HOM05D002538 ORTHO05D003162 2.9e-25 118.6 105 63.8
Ciclev10014139m.g Citrus clementina HOM05D002538 ORTHO05D003162 2.9e-25 118.6 105 61.9
Gorai.010G157500 Gossypium raimondii HOM05D002538 ORTHO05D003162 3.8e-25 118.2 105 65.7
DCAR_028041 Daucus carota HOM05D002538 ORTHO05D003162 6.5e-25 117.5 105 63.8
CDE02G1050 Ceratophyllum demersum HOM05D002538 ORTHO05D003162 8.6e-25 117.1 104 66.3
Gohir.A06G127200 Gossypium hirsutum HOM05D002538 ORTHO05D003162 8.6e-25 117.1 105 64.8
Gohir.D06G135500 Gossypium hirsutum HOM05D002538 ORTHO05D003162 8.6e-25 117.1 105 64.8
HanXRQChr15g0480031 Helianthus annuus HOM05D002538 ORTHO05D003162 1.5e-24 116.3 111 55.9
TWI38G0418 Tripterygium wilfordii HOM05D002538 ORTHO05D003162 1.5e-24 116.3 105 63.8
Sed0021408 Sechium edule HOM05D002538 ORTHO05D003162 1.9e-24 115.9 105 64.8
Eucgr.D00590 Eucalyptus grandis HOM05D002538 ORTHO05D003162 2.5e-24 115.5 104 60.6
Solyc02g077600.3 Solanum lycopersicum HOM05D002538 ORTHO05D003162 2.5e-24 115.5 105 62.9
Sopen02g022500 Solanum pennellii HOM05D002538 ORTHO05D003162 2.5e-24 115.5 105 62.9
MD10G1288200 Malus domestica HOM05D002538 ORTHO05D003162 5.5e-24 114.4 103 65.0
Atru.chr10.1782 Acer truncatum HOM05D002538 ORTHO05D003162 9.5e-24 113.6 104 64.4
Peaxi162Scf00099g00079 Petunia axillaris HOM05D002538 ORTHO05D003162 1.2e-23 113.2 105 63.8
Potri.011G058500 Populus trichocarpa HOM05D002538 ORTHO05D003162 1.4e-22 109.8 103 62.1
Potri.004G049400 Populus trichocarpa HOM05D002538 ORTHO05D003162 6.8e-22 107.5 103 59.2
Lj2C293T13 Lonicera japonica HOM05D002538 ORTHO05D003162 8.9e-22 107.1 105 61.9
Os02g0307000 Oryza sativa ssp. japonica HOM05D002538 ORTHO05D003162 8.9e-22 107.1 85 69.4
Sabra11G0040600 Salix brachista HOM05D002538 ORTHO05D003162 1.5e-21 106.3 103 60.2
Ca_18600_v3 Cicer arietinum L. HOM05D002538 ORTHO05D003162 2.0e-21 105.9 104 63.5
SalBow8G1315 Salvia bowleyana HOM05D002538 ORTHO05D003162 2.0e-21 105.9 106 58.5
SalBow8G4204 Salvia bowleyana HOM05D002538 ORTHO05D003162 2.0e-21 105.9 106 58.5
EL10Ac8g20445 Beta vulgaris HOM05D002538 ORTHO05D003162 3.4e-21 105.1 103 58.3
Os05g0563050 Oryza sativa ssp. japonica HOM05D002538 ORTHO05D003162 1.3e-20 103.2 109 60.6
ECA234G1452 Erigeron canadensis HOM05D002538 ORTHO05D003162 1.7e-20 102.8 105 56.2
Sabra04G0031100 Salix brachista HOM05D002538 ORTHO05D003162 2.2e-20 102.4 107 57.0
AUR62031088 Chenopodium quinoa HOM05D002538 ORTHO05D003162 3.7e-20 101.7 102 56.9
Hund18210 Selenicereus undatus HOM05D002538 ORTHO05D003162 3.7e-20 101.7 106 57.5
AUR62014880 Chenopodium quinoa HOM05D002538 ORTHO05D003162 8.3e-20 100.5 103 58.3
Lsat_1_v5_gn_4_27980 Lactuca sativa HOM05D002538 ORTHO05D003162 1.1e-19 100.1 101 58.4
Zm00001eb235320 Zea mays HOM05D002538 ORTHO05D003162 1.8e-19 99.4 85 63.5
Sc17g0005890 Simmondsia chinensis HOM05D002538 ORTHO05D003162 2.4e-19 99.0 106 56.6
Hund23821 Selenicereus undatus HOM05D002538 ORTHO05D003162 3.1e-19 98.6 105 53.3
HPP92_020202 Vanilla planifolia HOM05D002538 ORTHO05D003162 4.1e-19 98.2 105 59.0
Lj4g0011488 Lotus japonicus HOM05D002538 ORTHO05D003162 7.0e-19 97.4 105 58.1
Lsat_1_v5_gn_7_30920 Lactuca sativa HOM05D002538 ORTHO05D003162 9.2e-19 97.1 105 56.2
Phvul.003G290500 Phaseolus vulgaris HOM05D002538 ORTHO05D003162 9.2e-19 97.1 104 59.6
Psat7g116720 Pisum sativum HOM05D002538 ORTHO05D003162 9.2e-19 97.1 104 62.5
Glyma.13G234600 Glycine max HOM05D002538 ORTHO05D003162 1.6e-18 96.3 104 56.7
Lalb_Chr09g0327861 Lupinus albus HOM05D002538 ORTHO05D003162 3.5e-18 95.1 105 55.2
VMungo0540G0056 Vigna mungo HOM05D002538 ORTHO05D003162 7.8e-18 94.0 104 55.8
arahy.Tifrunner.gnm1.ann1.BNQL10 Arachis hypogaea HOM05D002538 ORTHO05D003162 2.3e-17 92.4 104 53.8
arahy.Tifrunner.gnm1.ann1.T00U8Q Arachis hypogaea HOM05D002538 ORTHO05D003162 2.3e-17 92.4 104 53.8
Lalb_Chr16g0384091 Lupinus albus HOM05D002538 ORTHO05D003162 2.3e-17 92.4 105 59.0
GSVIVG01021121001 Vitis vinifera HOM05D002538 ORTHO05D003162 3.8e-17 91.7 104 53.8
Medtr4g088220 Medicago truncatula HOM05D002538 ORTHO05D003162 6.6e-17 90.9 105 59.0
Migut.M01100 Erythranthe guttata HOM05D002538 ORTHO05D003162 1.9e-16 89.4 106 50.9
Lalb_Chr15g0089671 Lupinus albus HOM05D002538 ORTHO05D003162 3.3e-16 88.6 103 53.4
VMungo1395G0001 Vigna mungo HOM05D002538 ORTHO05D003162 7.3e-16 87.4 104 53.8
Glyma.13G174200 Glycine max HOM05D002538 ORTHO05D003162 2.1e-15 85.9 104 54.8
Glyma.07G202100 Glycine max HOM05D002538 ORTHO05D003162 4.7e-15 84.7 104 53.8
SEGI_39920 Sequoiadendron giganteum HOM05D002538 ORTHO05D003162 1.4e-14 83.2 105 48.6
MSTRG.7364 Avicennia marina HOM05D002538 ORTHO05D003162 2.3e-14 82.4 106 50.9
PSO675G8802 Papaver somniferum HOM05D002538 ORTHO05D003162 6.8e-14 80.9 100 55.0
Zm00001eb295820 Zea mays HOM05D002538 ORTHO05D003162 1.2e-13 80.1 106 55.7
PSO541G2371 Papaver somniferum HOM05D002538 ORTHO05D003162 2.0e-13 79.3 100 55.0
Zm00001eb343670 Zea mays HOM05D002538 ORTHO05D003162 2.0e-13 79.3 106 53.8
Hund21205 Selenicereus undatus HOM05D002538 ORTHO05D003162 2.6e-13 79.0 105 45.7
ATR0602G206 Amborella trichopoda HOM05D002538 ORTHO05D003162 1.3e-12 76.6 112 50.9
EL10Ac7g17568 Beta vulgaris HOM05D002538 ORTHO05D003162 3.7e-12 75.1 106 49.1
HanXRQChr17g0564931 Helianthus annuus HOM05D002538 ORTHO05D003162 3.7e-12 75.1 92 52.2
PGSC0003DMG400015073 Solanum tuberosum HOM05D002538 ORTHO05D003162 4.9e-12 74.7 84 52.4
Actinidia39481 Actinidia chinensis HOM05D002538 ORTHO05D003162 1.1e-11 73.6 61 65.6
AUR62008705 Chenopodium quinoa HOM05D002538 ORTHO05D003162 3.2e-11 72.0 106 48.1
AUR62025528 Chenopodium quinoa HOM05D002538 ORTHO05D003162 4.1e-11 71.6 106 48.1
SHI28093 Sapria himalayana HOM05D002538 ORTHO05D000001 7.0e-11 70.9 92 51.1
SGA_v2.0_scaffold309G48172 Striga asiatica HOM05D002538 ORTHO05D003162 2.0e-10 69.3 115 46.1
Oeu050786.1 Olea europaea HOM05D002538 ORTHO05D003162 3.5e-10 68.6 66 57.6
Glyma.15G078400 Glycine max HOM05D002538 ORTHO05D003162 1.7e-09 66.2 72 55.6
Oeu012159.2 Olea europaea HOM05D002538 ORTHO05D003162 4.3e-08 61.6 104 39.4
unitig_699.g19113 Utricularia gibba HOM05D002538 ORTHO05D003162 1.2e-07 60.1 105 35.2
Ah.15g093000 Amaranthus hybridus HOM05D002538 ORTHO05D003162 1.1e-06 57.0 105 39.0
TWI23G0843 Tripterygium wilfordii HOM05D002538 ORTHO05D003162 1.8e-06 56.2 103 39.8
unitig_27.g24978 Utricularia gibba HOM05D002538 ORTHO05D003162 2.3e-06 55.8 106 34.9
AagrBONN_evm.TU.Sc2ySwM_117.2138 Anthoceros agrestis HOM05D002538 ORTHO05D003162 5.2e-06 54.7 109 42.2
C07p29240 Brassica napus HOM05D002538 ORTHO05D003162 6.8e-06 54.3 108 38.9
BolC7t43466H Brassica oleracea HOM05D002538 ORTHO05D003162 6.8e-06 54.3 108 38.9
A06p46220 Brassica napus HOM05D002538 ORTHO05D003162 8.9e-06 53.9 111 39.6
BraA06t27486Z Brassica rapa HOM05D002538 ORTHO05D003162 8.9e-06 53.9 111 39.6


User provided reference genes

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