Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0810 Trochodendron aralioides HOM05D005337 ORTHO05D006567 4.4e-68 261.9 224 100.0
TAR624G0614 Trochodendron aralioides HOM05D005337 ORTHO05D006567 5.3e-45 185.3 114 100.0
CAN.G36.12 Capsicum annuum HOM05D005337 ORTHO05D006567 1.7e-43 180.3 223 62.8
EL10Ac9g22478 Beta vulgaris HOM05D005337 ORTHO05D006567 1.1e-37 161.0 217 77.9
Ciclev10014263m.g Citrus clementina HOM05D005337 ORTHO05D006567 2.4e-34 149.8 110 81.8
Dinv21523 Davidia involucrata HOM05D005337 ORTHO05D006567 2.4e-34 149.8 110 83.6
CSS0008957 Camellia sinensis var. sinensis HOM05D005337 ORTHO05D006567 5.5e-34 148.7 110 81.8
Lj2C569T6 Lonicera japonica HOM05D005337 ORTHO05D006567 6.0e-33 145.2 111 79.3
Eucgr.E02454 Eucalyptus grandis HOM05D005337 ORTHO05D006567 1.0e-32 144.4 111 64.0
Peaxi162Scf00045g00242 Petunia axillaris HOM05D005337 ORTHO05D006567 1.8e-32 143.7 111 64.9
GSVIVG01021547001 Vitis vinifera HOM05D005337 ORTHO05D006567 2.3e-32 143.3 110 80.9
MELO3C007107.2 Cucumis melo HOM05D005337 ORTHO05D006567 3.0e-32 142.9 111 63.1
Ca_18255_v3 Cicer arietinum L. HOM05D000068 ORTHO05D006567 5.1e-32 142.1 210 38.6
CsaV3_6G052010 Cucumis sativus L. HOM05D005337 ORTHO05D006567 6.7e-32 141.7 111 62.2
Nn3g20334 Nelumbo nucifera HOM05D005337 ORTHO05D006567 6.7e-32 141.7 110 82.7
CARHR029680 Cardamine hirsuta HOM05D005337 ORTHO05D006567 1.5e-31 140.6 112 60.7
Manes.01G172900 Manihot esculenta HOM05D005337 ORTHO05D006567 1.9e-31 140.2 105 70.5
vmacro03433 Vaccinium macrocarpon HOM05D005337 ORTHO05D006567 2.5e-31 139.8 110 79.1
TWI73G0840 Tripterygium wilfordii HOM05D005337 ORTHO05D006567 5.6e-31 138.7 110 79.1
ClCG01G024880 Citrullus lanatus HOM05D005337 ORTHO05D006567 7.4e-31 138.3 111 61.3
Nitab4.5_0000315g0050 Nicotiana tabacum HOM05D005337 ORTHO05D006567 7.4e-31 138.3 111 63.1
Nitab4.5_0002071g0050 Nicotiana tabacum HOM05D005337 ORTHO05D006567 7.4e-31 138.3 111 63.1
Potri.011G082300 Populus trichocarpa HOM05D005337 ORTHO05D006567 7.4e-31 138.3 108 63.9
QL05p055125 Quercus lobata HOM05D005337 ORTHO05D006567 9.6e-31 137.9 79 81.0
Thhalv10006807m.g Eutrema salsugineum HOM05D005337 ORTHO05D006567 1.3e-30 137.5 111 69.4
Prupe.4G085500 Prunus persica HOM05D005337 ORTHO05D006567 1.3e-30 137.5 111 62.2
RcHm_v2.0_Chr5g0014911 Rosa chinensis HOM05D005337 ORTHO05D006567 1.3e-30 137.5 111 61.3
Sp1g26130 Schrenkiella parvula HOM05D005337 ORTHO05D006567 1.6e-30 137.1 111 59.5
PSO384G4021 Papaver somniferum HOM05D005337 ORTHO05D006567 2.1e-30 136.7 111 78.4
CAN.G36.25 Capsicum annuum HOM05D005337 ORTHO05D006567 3.7e-30 136.0 110 62.7
THA.LOC104820664 Tarenaya hassleriana HOM05D005337 ORTHO05D006567 3.7e-30 136.0 112 59.8
BraA09t39143Z Brassica rapa HOM05D005337 ORTHO05D006567 6.2e-30 135.2 110 76.4
Cpa.g.sc17.49 Carica papaya HOM05D005337 ORTHO05D006567 6.2e-30 135.2 108 76.9
Gohir.D10G045100 Gossypium hirsutum HOM05D005337 ORTHO05D006567 6.2e-30 135.2 111 76.6
Gorai.011G048000 Gossypium raimondii HOM05D005337 ORTHO05D006567 6.2e-30 135.2 111 76.6
Solyc08g023490.4 Solanum lycopersicum HOM05D005337 ORTHO05D006567 6.2e-30 135.2 111 59.5
PGSC0003DMG400002287 Solanum tuberosum HOM05D005337 ORTHO05D006567 6.2e-30 135.2 111 60.4
AL1G44240 Arabidopsis lyrata HOM05D005337 ORTHO05D006567 8.1e-30 134.8 111 58.6
BcaB07g32639 Brassica carinata HOM05D005337 ORTHO05D006567 8.1e-30 134.8 110 71.8
Carub.0001s2852 Capsella rubella HOM05D005337 ORTHO05D006567 8.1e-30 134.8 111 68.5
MBI18_g11220_MAGBIO Magnolia biondii HOM05D005337 ORTHO05D006567 8.1e-30 134.8 110 78.2
FvH4_3g05050 Fragaria vesca HOM05D005337 ORTHO05D006567 1.4e-29 134.0 111 60.4
Glyma.15G090700 Glycine max HOM05D005337 ORTHO05D006567 1.4e-29 134.0 105 61.9
Psat3g019680 Pisum sativum HOM05D005337 ORTHO05D006567 1.4e-29 134.0 112 74.1
Sed0025020 Sechium edule HOM05D005337 ORTHO05D006567 1.4e-29 134.0 105 61.9
Sopen08g008640 Solanum pennellii HOM05D005337 ORTHO05D006567 1.4e-29 134.0 107 60.7
Ah.01g015050 Amaranthus hybridus HOM05D005337 ORTHO05D006567 1.8e-29 133.7 214 73.8
BcaC05g27061 Brassica carinata HOM05D005337 ORTHO05D006567 1.8e-29 133.7 110 76.4
C05p29200 Brassica napus HOM05D005337 ORTHO05D006567 1.8e-29 133.7 110 76.4
BolC5t31652H Brassica oleracea HOM05D005337 ORTHO05D006567 1.8e-29 133.7 110 76.4
MD10G1258300 Malus domestica HOM05D005337 ORTHO05D006567 1.8e-29 133.7 111 61.3
Ca_00508_v3 Cicer arietinum L. HOM05D005337 ORTHO05D006567 2.4e-29 133.3 113 72.6
A09p36160 Brassica napus HOM05D005337 ORTHO05D006567 3.1e-29 132.9 110 75.5
FAN25G3288 Fragaria x ananassa HOM05D005337 ORTHO05D006567 3.1e-29 132.9 111 59.5
Sabra11G0065300 Salix brachista HOM05D005337 ORTHO05D006567 3.1e-29 132.9 108 61.1
FAN11G3121 Fragaria x ananassa HOM05D005337 ORTHO05D006567 5.3e-29 132.1 111 59.5
FAN16G3117 Fragaria x ananassa HOM05D005337 ORTHO05D006567 5.3e-29 132.1 111 59.5
Cfa000901 Carpinus fangiana HOM05D005337 ORTHO05D006567 6.9e-29 131.7 108 75.0
COL.COLO4_31011 Corchorus olitorius HOM05D005337 ORTHO05D006567 6.9e-29 131.7 111 74.8
Lsat_1_v5_gn_7_27480 Lactuca sativa HOM05D005337 ORTHO05D006567 6.9e-29 131.7 216 72.7
RcHm_v2.0_Chr3g0490551 Rosa chinensis HOM05D005337 ORTHO05D006567 6.9e-29 131.7 112 58.9
MSTRG.7512 Avicennia marina HOM05D005337 ORTHO05D006567 9.0e-29 131.3 111 57.7
Cc11_g05070 Coffea canephora HOM05D005337 ORTHO05D006567 1.2e-28 131.0 113 73.5
CiPaw.09G119800 Carya illinoinensis HOM05D005337 ORTHO05D006567 1.5e-28 130.6 108 76.9
Rhsim09G0050900 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.5e-28 130.6 110 58.2
Aqoxy6G00107 Aquilegia oxysepala HOM05D005337 ORTHO05D006567 2.0e-28 130.2 111 77.5
Gohir.A10G043900 Gossypium hirsutum HOM05D005337 ORTHO05D006567 2.6e-28 129.8 110 75.5
FAN21G0118 Fragaria x ananassa HOM05D005337 ORTHO05D006567 5.8e-28 128.6 190 50.5
Rhsim13G0117400 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.0e-27 127.9 184 57.1
Glyma.13G221600 Glycine max HOM05D005337 ORTHO05D006567 1.3e-27 127.5 105 60.0
BolC5t31646H Brassica oleracea HOM05D005337 ORTHO05D006567 2.2e-27 126.7 110 72.7
AUR62025016 Chenopodium quinoa HOM05D005337 ORTHO05D006567 2.9e-27 126.3 109 56.9
Lj6g0017822 Lotus japonicus HOM05D005337 ORTHO05D006567 2.9e-27 126.3 112 72.3
PGR035G0002 Punica granatum HOM05D005337 ORTHO05D006567 3.8e-27 125.9 106 60.4
Lalb_Chr15g0086601 Lupinus albus HOM05D005337 ORTHO05D006567 4.9e-27 125.6 83 71.1
A09p36200 Brassica napus HOM05D005337 ORTHO05D006567 1.4e-26 124.0 110 57.3
CANSAT35G0686 Cannabis sativa HOM05D005337 ORTHO05D006567 1.4e-26 124.0 111 70.3
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.4e-26 124.0 100 61.0
Thecc.06G144500 Theobroma cacao HOM05D005337 ORTHO05D006567 2.5e-26 123.2 113 72.6
ECA236G3236 Erigeron canadensis HOM05D005337 ORTHO05D006567 3.2e-26 122.9 110 52.7
ATR1098G077 Amborella trichopoda HOM05D005337 ORTHO05D006567 4.2e-26 122.5 105 55.2
Duzib235G0011 Durio zibethinus HOM05D005337 ORTHO05D006567 4.2e-26 122.5 110 71.8
VMungo0540G1354 Vigna mungo HOM05D005337 ORTHO05D006567 4.2e-26 122.5 106 73.6
TPR.G4722 Trifolium pratense HOM05D005337 ORTHO05D006567 9.3e-26 121.3 82 68.3
unitig_37.g12089 Utricularia gibba HOM05D005337 ORTHO05D006567 9.3e-26 121.3 108 54.6
AUR62017465 Chenopodium quinoa HOM05D005337 ORTHO05D006567 1.6e-25 120.6 109 67.0
Aa31LG6G5450 Aethionema arabicum HOM05D005337 ORTHO05D006567 3.5e-25 119.4 81 65.4
arahy.Tifrunner.gnm1.ann1.RN8PQ8 Arachis hypogaea HOM05D005337 ORTHO05D006567 7.9e-25 118.2 106 55.7
arahy.Tifrunner.gnm1.ann1.WGPX7I Arachis hypogaea HOM05D005337 ORTHO05D006567 7.9e-25 118.2 106 55.7
Sc05g0006000 Simmondsia chinensis HOM05D005337 ORTHO05D006567 1.3e-24 117.5 107 61.7
arahy.Tifrunner.gnm1.ann1.QR7D30 Arachis hypogaea HOM05D005337 ORTHO05D006567 2.3e-24 116.7 106 53.8
CDE02G1473 Ceratophyllum demersum HOM05D005337 ORTHO05D006567 3.0e-24 116.3 109 70.6
DCAR_004624 Daucus carota HOM05D005337 ORTHO05D000307 3.0e-24 116.3 110 68.2
SalBow8G2351 Salvia bowleyana HOM05D005337 ORTHO05D006567 3.0e-24 116.3 105 53.3
Phvul.006G168127 Phaseolus vulgaris HOM05D005337 ORTHO05D006567 3.9e-24 115.9 106 70.8
Cfa000900 Carpinus fangiana HOM05D005337 ORTHO05D006567 1.1e-23 114.4 102 71.6
Medtr2g018550 Medicago truncatula HOM05D005337 ORTHO05D006567 2.5e-23 113.2 76 69.7
Migut.M00881 Erythranthe guttata HOM05D005337 ORTHO05D006567 3.3e-23 112.8 77 63.6
SEGI_37079 Sequoiadendron giganteum HOM05D005337 ORTHO05D006567 4.3e-23 112.5 109 49.5
Atru.chr10.1089 Acer truncatum HOM05D005337 ORTHO05D006567 1.6e-22 110.5 110 68.2
AT1G30290 Arabidopsis thaliana HOM05D005337 ORTHO05D006567 6.3e-22 108.6 98 66.3
Zm00001eb134800 Zea mays HOM05D005337 ORTHO05D006567 4.1e-21 105.9 110 62.7
Atru.BG.302.p Acer truncatum HOM05D005337 ORTHO05D006567 9.0e-21 104.8 103 70.9
SGA_v2.0_scaffold223G42824 Striga asiatica HOM05D005337 ORTHO05D006567 2.6e-20 103.2 111 45.9
BcaB07g32630 Brassica carinata HOM05D005337 ORTHO05D006567 1.0e-19 101.3 159 74.2
Hund17688 Selenicereus undatus HOM05D005337 ORTHO05D006567 1.0e-19 101.3 73 65.8
Os12g0615600 Oryza sativa ssp. japonica HOM05D005337 ORTHO05D006567 8.5e-19 98.2 107 62.6
SHI24905 Sapria himalayana HOM05D005337 ORTHO05D006567 2.5e-18 96.7 99 51.5
HanXRQChr04g0116581 Helianthus annuus HOM05D005337 ORTHO05D006567 4.2e-18 95.9 88 55.7
Actinidia13442 Actinidia chinensis HOM05D005337 ORTHO05D006567 1.6e-17 94.0 90 74.4
BraA09t39145Z Brassica rapa HOM05D005337 ORTHO05D006567 2.1e-17 93.6 87 74.7
arahy.Tifrunner.gnm1.ann1.1U5Z8B Arachis hypogaea HOM05D005337 ORTHO05D006567 7.9e-17 91.7 72 58.3
QL07p034390 Quercus lobata HOM05D005337 ORTHO05D006567 8.2e-14 81.6 52 71.2
arahy.Tifrunner.gnm1.ann1.S6HMEC Arachis hypogaea HOM05D005337 ORTHO05D006567 2.0e-12 77.0 76 51.3
Medtr2g018580 Medicago truncatula HOM05D005337 ORTHO05D006567 3.4e-12 76.3 58 62.1


User provided reference genes

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