Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 3.3e-179 632.1 452 100.0
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 4.7e-77 292.7 319 57.1
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 4.9e-58 229.6 337 44.5
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 1.3e-55 221.5 313 42.8
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 1.7e-55 221.1 295 50.5
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 1.5e-46 191.4 331 43.2
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 5.6e-46 189.5 331 39.0
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 1.6e-45 188.0 316 46.2
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 3.6e-45 186.8 334 38.0
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 6.2e-45 186.0 343 44.3
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 6.9e-44 182.6 284 40.8
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 1.2e-43 181.8 300 40.7
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 5.8e-43 179.5 252 43.3
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 9.9e-43 178.7 301 36.9
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 3.8e-42 176.8 316 38.6
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 6.4e-42 176.0 328 40.9
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 1.1e-41 175.3 312 40.4
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 1.9e-41 174.5 296 40.2
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 2.4e-41 174.1 305 38.7
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 3.2e-41 173.7 309 43.0
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 2.7e-40 170.6 335 37.3
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 3.5e-40 170.2 306 37.6
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 1.3e-39 168.3 373 35.7
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 2.3e-39 167.5 331 36.9
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 5.1e-39 166.4 345 34.8
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 8.7e-39 165.6 229 45.9
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 1.1e-38 165.2 416 33.4
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 1.1e-38 165.2 297 46.8
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 1.9e-38 164.5 262 40.8
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla HOM05D006067 ORTHO05D007327 4.3e-38 163.3 244 46.7
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 4.3e-38 163.3 312 38.8
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 1.6e-37 161.4 269 42.0
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 3.7e-37 160.2 332 37.3
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 4.8e-37 159.8 312 34.9
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 1.1e-36 158.7 263 38.4
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 1.4e-36 158.3 356 31.5
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 1.4e-36 158.3 199 46.7
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 1.8e-36 157.9 275 38.5
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 2.4e-36 157.5 295 36.9
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 4.0e-36 156.8 282 36.9
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 5.3e-36 156.4 315 34.6
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 5.3e-36 156.4 315 34.6
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 6.9e-36 156.0 356 32.6
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 1.2e-35 155.2 314 37.9
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 2.0e-35 154.5 261 39.5
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 4.5e-35 153.3 317 34.4
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 4.5e-35 153.3 296 36.8
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 5.8e-35 152.9 273 39.9
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 4.9e-34 149.8 237 42.6
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 8.4e-34 149.1 311 32.8
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 8.4e-34 149.1 324 40.1
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 1.9e-33 147.9 324 33.6
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 3.2e-33 147.1 356 32.6
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 4.2e-33 146.7 322 37.0
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 9.3e-33 145.6 222 38.7
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 9.3e-33 145.6 312 34.9
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 1.2e-32 145.2 282 37.2
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 1.6e-32 144.8 343 34.7
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 1.6e-32 144.8 347 34.3
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 2.1e-32 144.4 186 41.9
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 4.6e-32 143.3 319 35.7
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 1.3e-31 141.7 337 35.3
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 1.8e-31 141.4 269 40.5
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 3.0e-31 140.6 254 37.0
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 8.7e-31 139.0 267 40.4
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 2.5e-30 137.5 175 47.4
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 2.5e-30 137.5 243 43.2
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 2.5e-30 137.5 198 43.9
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 5.7e-30 136.3 206 40.3
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 7.4e-30 136.0 271 35.4
AT1G78810 Arabidopsis thaliana HOM05D006067 ORTHO05D007327 7.4e-30 136.0 302 36.1
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 9.6e-30 135.6 259 40.2
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 1.3e-29 135.2 309 35.9
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 1.6e-29 134.8 167 43.7
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 2.8e-29 134.0 266 38.7
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 3.7e-29 133.7 282 34.4
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 6.2e-29 132.9 239 39.3
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 1.1e-28 132.1 308 34.7
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 1.1e-28 132.1 296 33.1
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 1.1e-28 132.1 239 39.3
Eucgr.F03267 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.8e-28 131.3 287 34.8
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 2.4e-28 131.0 280 35.4
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 2.4e-28 131.0 354 34.5
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 2.4e-28 131.0 180 41.1
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 4.0e-28 130.2 216 40.3
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 5.3e-28 129.8 299 33.4
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 6.9e-28 129.4 191 41.9
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 2.0e-27 127.9 226 37.2
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 2.6e-27 127.5 357 33.9
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 2.6e-27 127.5 256 33.6
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 7.6e-27 125.9 325 33.2
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 1.3e-26 125.2 190 40.5
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 1.7e-26 124.8 254 34.6
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 2.2e-26 124.4 207 38.2
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 3.8e-26 123.6 190 40.5
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 1.9e-25 121.3 256 33.6
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 4.2e-25 120.2 328 30.8
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 5.5e-25 119.8 223 36.3
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 7.1e-25 119.4 184 40.8
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 9.3e-25 119.0 328 31.4
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 9.3e-25 119.0 328 31.4
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 9.3e-25 119.0 247 35.2
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 9.3e-25 119.0 346 34.1
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 1.2e-24 118.6 324 33.3
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 2.1e-24 117.9 324 33.0
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 1.3e-23 115.2 328 30.8
BcaB05g25155 Brassica carinata HOM05D006067 ORTHO05D007327 1.3e-21 108.6 297 31.3
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 3.7e-21 107.1 270 28.5
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 3.7e-21 107.1 219 35.6
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 8.2e-21 105.9 146 40.4
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 4.1e-20 103.6 138 36.2
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 1.5e-19 101.7 168 41.1
Nitab4.5_0003565g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 5.9e-19 99.8 161 41.0
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 6.5e-18 96.3 84 48.8
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 8.8e-15 85.9 103 45.6
Mapoly0061s0049 Marchantia polymorpha HOM05D006067 ORTHO05D007327 1.5e-14 85.1 85 45.9
Os01g0759000 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 1.8e-12 78.2 285 29.1
PGSC0003DMG400021262 Solanum tuberosum HOM05D006067 ORTHO05D007327 2.4e-12 77.8 75 53.3
SEGI_27593 Sequoiadendron giganteum HOM05D006067 ORTHO05D007327 2.0e-11 74.7 137 33.6
Zm00001eb152520 Zea mays HOM05D006067 ORTHO05D007327 2.0e-11 74.7 136 38.2
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 4.5e-11 73.6 66 51.5
Nitab4.5_0000383g0160 Nicotiana tabacum HOM05D006067 ORTHO05D007327 4.5e-11 73.6 109 38.5
Lj1P829T26 Lonicera japonica HOM05D006067 ORTHO05D007327 8.5e-10 69.3 134 37.3
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 1.9e-09 68.2 58 53.4
Pp3c23_21590 Physcomitrium patens HOM05D006067 ORTHO05D007327 1.6e-08 65.1 99 33.3
Thecc.07G116600 Theobroma cacao HOM05D006067 ORTHO05D007327 3.6e-08 63.9 142 25.4
Psat0s911g0040 Pisum sativum HOM05D006067 ORTHO05D007327 4.4e-06 57.0 43 58.1


User provided reference genes

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