Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 0.0e+00 3103.9 1652 100.0
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 0.0e+00 2028.4 1675 70.8
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 1.7e-257 894.0 1815 40.2
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 2.4e-243 847.0 1705 41.1
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 2.3e-238 830.5 1880 39.0
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 1.2e-223 781.6 1706 39.4
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 1.5e-208 731.5 1693 39.1
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 5.5e-208 729.6 1895 35.5
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.1e-192 678.7 1704 37.3
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 1.9e-192 677.9 1904 35.0
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 7.2e-192 676.0 1891 35.0
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 8.8e-190 669.1 1648 36.8
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 2.9e-185 654.1 1817 35.8
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 4.6e-162 577.0 1811 34.5
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 1.1e-160 572.4 1926 32.5
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 8.4e-156 556.2 1811 32.9
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 7.1e-155 553.1 1795 33.9
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 2.7e-154 551.2 1788 33.6
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 5.6e-152 543.5 1914 33.2
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 1.3e-143 515.8 1697 34.0
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 1.6e-143 515.4 1905 30.8
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 9.3e-139 499.6 1836 30.4
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 3.0e-137 494.6 1835 31.3
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 2.4e-134 485.0 1957 31.1
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 1.5e-128 465.7 2003 29.5
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 1.9e-128 465.3 1710 33.3
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 4.5e-125 454.1 1957 29.7
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 5.5e-123 447.2 1957 29.2
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 4.3e-120 437.6 1749 31.4
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 2.2e-119 435.3 1909 29.3
Rhsim04G0012500 Rhododendron simsii HOM05D004836 ORTHO05D005150 2.8e-119 434.9 1463 32.1
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 2.4e-118 431.8 1709 29.4
FAN10G2990 Fragaria x ananassa HOM05D004836 ORTHO05D005150 3.1e-118 431.4 1912 28.8
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 4.1e-118 431.0 2026 29.4
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 1.5e-117 429.1 1719 31.9
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 1.1e-115 422.9 1640 29.0
Gohir.A01G091700 Gossypium hirsutum HOM05D004836 ORTHO05D005150 5.7e-112 410.6 1522 32.1
Gorai.013G152400 Gossypium raimondii HOM05D004836 ORTHO05D005150 2.2e-111 408.7 1922 29.6
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.8e-111 408.3 1902 28.4
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 3.7e-111 407.9 1901 28.2
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 2.4e-110 405.2 1993 28.0
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 4.1e-110 404.4 1915 28.5
Gohir.A13G132500 Gossypium hirsutum HOM05D004836 ORTHO05D005150 4.5e-109 401.0 1905 29.0
Ciclev10007227m.g Citrus clementina HOM05D004836 ORTHO05D005150 2.2e-108 398.7 2070 30.0
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 1.1e-107 396.4 1762 29.4
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 9.4e-107 393.3 2000 27.8
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 1.0e-105 389.8 1917 28.1
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 3.0e-105 388.3 1993 27.4
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 1.2e-101 376.3 1744 28.4
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 2.1e-98 365.5 1827 29.6
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 8.0e-98 363.6 1944 28.0
Gohir.D13G135900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 4.4e-96 357.8 1619 29.7
PGSC0003DMG400022276 Solanum tuberosum HOM05D004836 ORTHO05D005150 2.2e-95 355.5 831 38.5
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 3.7e-95 354.8 1732 29.0
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 3.5e-93 348.2 1843 27.4
Lj5g0000015 Lotus japonicus HOM05D004836 ORTHO05D005150 7.7e-93 347.1 1754 29.2
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 1.3e-92 346.3 1828 28.0
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 1.1e-91 343.2 1693 30.5
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 4.2e-91 341.3 1824 28.1
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 7.2e-91 340.5 2043 27.4
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 9.4e-91 340.1 1706 27.0
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 2.7e-90 338.6 1740 28.7
CSS0003147 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 1.8e-89 335.9 483 54.0
COL.COLO4_09837 Corchorus olitorius HOM05D004836 ORTHO05D005150 2.0e-88 332.4 1745 26.5
Glyma.10G277400 Glycine max HOM05D004836 ORTHO05D005150 3.3e-88 331.6 1805 28.7
CsaV3_7G011380 Cucumis sativus L. HOM05D004836 ORTHO05D005150 4.8e-87 327.8 1755 28.2
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 1.4e-86 326.2 1876 25.6
Glyma.20G112200 Glycine max HOM05D004836 ORTHO05D005150 7.0e-86 323.9 1823 27.7
PSO541G5284 Papaver somniferum HOM05D004836 ORTHO05D005150 1.3e-84 319.7 1956 27.8
Hund23108 Selenicereus undatus HOM05D004836 ORTHO05D005150 1.3e-84 319.7 1768 27.9
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 4.7e-82 311.2 1810 28.3
PSO675G3612 Papaver somniferum HOM05D004836 ORTHO05D005150 4.8e-79 301.2 1953 28.0
Lalb_Chr21g0309081 Lupinus albus HOM05D004836 ORTHO05D005150 2.4e-78 298.9 1776 27.1
Lalb_Chr06g0166281 Lupinus albus HOM05D004836 ORTHO05D005150 3.3e-75 288.5 1763 27.6
Phvul.003G265300 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 7.2e-75 287.3 1755 27.9
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 1.2e-74 286.6 1778 27.9
TWI39G0854 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 2.3e-73 282.3 467 51.2
Ca_25650_v3 Cicer arietinum L. HOM05D004836 ORTHO05D005150 4.0e-73 281.6 1736 27.6
vmacro11592 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 1.5e-72 279.6 544 38.1
MELO3C024947.2 Cucumis melo HOM05D004836 ORTHO05D005150 2.0e-72 279.3 1760 27.3
CDE04G0223 Ceratophyllum demersum HOM05D000588 ORTHO05D005150 4.4e-72 278.1 1747 27.5
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 9.8e-72 276.9 1703 26.4
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 2.0e-69 269.2 1836 27.8
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 2.7e-69 268.9 1792 27.6
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 1.5e-67 263.1 1721 26.9
Cpa.g.sc12.114 Carica papaya HOM05D004836 ORTHO05D005150 9.5e-67 260.4 975 31.0
Medtr1g111660 Medicago truncatula HOM05D004836 ORTHO05D005150 1.2e-66 260.0 1754 25.3
AUR62036461 Chenopodium quinoa HOM05D004836 ORTHO05D005150 6.8e-65 254.2 1787 25.4
Lj1A890T52 Lonicera japonica HOM05D004836 ORTHO05D005150 1.2e-64 253.4 701 37.9
Hund20644 Selenicereus undatus HOM05D004836 ORTHO05D005150 8.3e-63 247.3 1752 26.9
MD00G1168400 Malus domestica HOM05D004836 ORTHO05D005150 6.0e-61 241.1 529 44.8
VMungo0720G3177 Vigna mungo HOM05D004836 ORTHO05D005150 4.3e-59 235.0 1740 27.2
HanXRQChr03g0074011 Helianthus annuus HOM05D004836 ORTHO05D005150 5.6e-59 234.6 840 32.4
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 1.2e-58 233.4 1727 25.1
AUR62017108 Chenopodium quinoa HOM05D004836 ORTHO05D005150 8.0e-58 230.7 1789 24.8
ClCG09G021380 Citrullus lanatus HOM05D004836 ORTHO05D005150 1.5e-56 226.5 1671 26.9
Ah.06g181450 Amaranthus hybridus HOM05D004836 ORTHO05D005150 9.8e-56 223.8 1806 25.5
ATR0751G141 Amborella trichopoda HOM05D004836 ORTHO05D005150 3.7e-55 221.9 1731 26.2
Sed0003689 Sechium edule HOM05D004836 ORTHO05D005150 9.2e-54 217.2 651 36.9
EL10Ac4g07562 Beta vulgaris HOM05D004836 ORTHO05D005150 3.5e-53 215.3 672 39.9
TPR.G26309 Trifolium pratense HOM05D004836 ORTHO05D005150 4.6e-53 214.9 1503 26.4
THA.LOC104811669 Tarenaya hassleriana HOM05D004836 ORTHO05D005150 8.6e-52 210.7 1963 25.3
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 1.9e-51 209.5 1768 25.6
MD11G1030200 Malus domestica HOM05D004836 ORTHO05D005150 6.8e-49 201.1 477 44.9
Hma1.2p1_1109F.1_g258180 Hydrangea macrophylla HOM05D004836 ORTHO05D005150 2.0e-48 199.5 296 43.2
Carub.0008s1617 Capsella rubella HOM05D004836 ORTHO05D005150 5.1e-44 184.9 1848 25.4
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 2.0e-40 172.9 656 36.1
HPP92_018201 Vanilla planifolia HOM05D004836 ORTHO05D005150 2.6e-40 172.6 621 32.9
Aa31LG3G11720 Aethionema arabicum HOM05D004836 ORTHO05D005150 5.4e-38 164.9 1942 24.3
TWI39G0173 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 2.1e-37 162.9 273 38.5
Sp6g17700 Schrenkiella parvula HOM05D004836 ORTHO05D005150 4.6e-37 161.8 664 35.5
CARHR269190 Cardamine hirsuta HOM05D004836 ORTHO05D005150 6.6e-36 157.9 669 37.5
AUR62006337 Chenopodium quinoa HOM05D004836 ORTHO05D005150 7.6e-32 144.4 727 27.5
Lj1A890T51 Lonicera japonica HOM05D004836 ORTHO05D005150 9.9e-32 144.1 969 25.9
AT5G55820 Arabidopsis thaliana HOM05D004836 ORTHO05D005150 6.4e-31 141.4 1794 25.3
arahy.Tifrunner.gnm1.ann1.TB163P Arachis hypogaea HOM05D004836 ORTHO05D005150 8.4e-31 141.0 298 32.2
C03p16240 Brassica napus HOM05D004836 ORTHO05D005150 2.4e-30 139.4 670 34.9
AUR62044127 Chenopodium quinoa HOM05D004836 ORTHO05D005150 7.1e-30 137.9 1490 23.8
BolC3t14046H Brassica oleracea HOM05D004836 ORTHO05D005150 3.3e-27 129.0 669 34.2
A03p13800 Brassica napus HOM05D004836 ORTHO05D005150 2.8e-26 125.9 665 34.9
BraA03t10683Z Brassica rapa HOM05D004836 ORTHO05D005150 2.8e-26 125.9 679 34.5
Thhalv10012421m.g Eutrema salsugineum HOM05D004836 ORTHO05D005150 4.8e-26 125.2 678 33.8
TWI39G0060 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 1.8e-25 123.2 326 31.6
vmacro11593 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 9.0e-25 120.9 257 50.2
SEGI_04158 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 6.7e-20 104.8 253 35.6
MD03G1025800 Malus domestica HOM05D004836 ORTHO05D005150 3.1e-17 95.9 86 66.3
Os09g0477700 Oryza sativa ssp. japonica HOM05D028105 ORTHO05D005150 3.1e-17 95.9 761 24.8
Zm00001eb316050 Zea mays HOM05D028105 ORTHO05D005150 3.1e-17 95.9 825 28.7
Actinidia30401 Actinidia chinensis HOM05D004836 ORTHO05D005150 5.3e-17 95.1 63 71.4
ATR0712G152 Amborella trichopoda HOM05D004836 ORTHO05D005150 2.0e-16 93.2 282 30.9
CDE02G4444 Ceratophyllum demersum HOM05D004836 ORTHO05D005150 2.0e-16 93.2 313 30.7
SEGI_26437 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 2.0e-16 93.2 555 28.5
Psat2g132080 Pisum sativum HOM05D004836 ORTHO05D005150 2.6e-16 92.8 306 30.4
unitig_22.g5946 Utricularia gibba HOM05D004836 ORTHO05D005150 1.0e-15 90.9 252 30.6
Actinidia30399 Actinidia chinensis HOM05D004836 ORTHO05D005150 3.8e-15 89.0 73 58.9
ATR0712G030 Amborella trichopoda HOM05D004836 ORTHO05D005150 5.5e-14 85.1 333 30.3
BcaC01g06394 Brassica carinata HOM05D004836 ORTHO05D005150 4.6e-13 82.0 88 46.6
BcaB08g35940 Brassica carinata HOM05D004836 ORTHO05D005150 3.0e-12 79.3 209 28.2
Aqoxy4G00052 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 1.1e-11 77.4 169 34.3
Cpa.g.c38368 Carica papaya HOM05D004836 ORTHO05D005150 4.3e-11 75.5 46 69.6
MBI14_g10145_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 4.3e-11 75.5 65 56.9
CDE02G3132 Ceratophyllum demersum HOM05D000588 ORTHO05D005150 2.8e-10 72.8 382 24.6
RhsimUnG0156400 Rhododendron simsii HOM05D000074 ORTHO05D001262 2.8e-10 72.8 60 55.0
MBI13_g20252_MAGBIO Magnolia biondii HOM05D002159 ORTHO05D033708 4.8e-10 72.0 93 49.5
CDE02G2584 Ceratophyllum demersum HOM05D004836 ORTHO05D005150 6.2e-10 71.6 58 69.0
TPR.G26295 Trifolium pratense HOM05D004836 ORTHO05D005150 1.1e-09 70.9 108 43.5
PSO063G5346 Papaver somniferum HOM05D004836 ORTHO05D005150 1.5e-08 67.0 365 32.6
HanXRQChr03g0074021 Helianthus annuus HOM05D004836 ORTHO05D005150 3.4e-08 65.9 48 62.5
Actinidia30400 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.0e-07 64.3 137 36.5
MD00G1168200 Malus domestica HOM05D004836 ORTHO05D005150 2.9e-07 62.8 186 33.3
Psat2g132120 Pisum sativum HOM05D004836 ORTHO05D005150 1.9e-06 60.1 178 27.5
Pp3c1_42830 Physcomitrium patens HOM05D014698 ORTHO05D016532 7.1e-06 58.2 64 54.7


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