Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0666 Trochodendron aralioides HOM05D010366 ORTHO05D010665 6.2e-100 367.5 187 100.0
Aqoxy1G02849 Aquilegia oxysepala HOM05D010366 ORTHO05D010665 4.6e-26 122.1 173 49.7
TAR627G0180 Trochodendron aralioides HOM05D005375 ORTHO05D006598 3.3e-24 115.9 103 65.0
Thecc.06G232400 Theobroma cacao HOM05D010366 ORTHO05D010665 9.5e-24 114.4 122 54.9
Thecc.07G027800 Theobroma cacao HOM05D014067 ORTHO05D010665 2.6e-21 106.3 168 44.0
Dinv07396 Davidia involucrata HOM05D010366 ORTHO05D010665 5.4e-19 98.6 171 42.7
COL.COLO4_31874 Corchorus olitorius HOM05D010366 ORTHO05D010665 7.1e-19 98.2 161 44.1
Potri.006G008900 Populus trichocarpa HOM05D010366 ORTHO05D010665 1.6e-18 97.1 164 41.5
Aqoxy1G04122 Aquilegia oxysepala HOM05D010366 ORTHO05D010665 4.6e-18 95.5 175 39.4
Actinidia35372 Actinidia chinensis HOM05D014067 ORTHO05D010665 1.0e-17 94.4 159 45.3
Potri.016G015300 Populus trichocarpa HOM05D010366 ORTHO05D010665 1.3e-17 94.0 137 47.4
Gohir.A06G205801 Gossypium hirsutum HOM05D010366 ORTHO05D010665 3.9e-17 92.4 160 43.8
Gohir.D06G215850 Gossypium hirsutum HOM05D010366 ORTHO05D010665 5.1e-17 92.0 168 42.9
Gorai.010G250400 Gossypium raimondii HOM05D010366 ORTHO05D010665 8.6e-17 91.3 168 42.9
FAN21G4035 Fragaria x ananassa HOM05D010366 ORTHO05D010665 1.4e-14 84.0 203 37.4
FvH4_3g01051 Fragaria vesca HOM05D010366 ORTHO05D010665 3.1e-14 82.8 203 36.0
Manes.10G050200 Manihot esculenta HOM05D010366 ORTHO05D010665 1.5e-13 80.5 173 39.3
Gohir.A01G084850 Gossypium hirsutum HOM05D014067 ORTHO05D010665 5.8e-13 78.6 182 38.5
Gorai.010G186100 Gossypium raimondii HOM05D010366 ORTHO05D010665 3.7e-12 75.9 163 38.7
Oeu005516.1 Olea europaea HOM05D014067 ORTHO05D010665 3.7e-12 75.9 142 39.4
QL09p006329 Quercus lobata HOM05D010366 ORTHO05D010665 3.7e-12 75.9 131 43.5
Atru.chr1.2465 Acer truncatum HOM05D010366 ORTHO05D010665 6.4e-12 75.1 163 39.3
Gohir.D06G159400 Gossypium hirsutum HOM05D010366 ORTHO05D010665 8.4e-12 74.7 156 41.0
CiPaw.10G077400 Carya illinoinensis HOM05D010366 ORTHO05D010665 1.9e-11 73.6 111 48.6
Gohir.D01G071250 Gossypium hirsutum HOM05D014067 ORTHO05D010665 3.2e-11 72.8 179 37.4
Gohir.A06G153000 Gossypium hirsutum HOM05D010366 ORTHO05D010665 4.1e-11 72.4 153 38.6
Cfa000112 Carpinus fangiana HOM05D065501 ORTHO05D010665 9.2e-11 71.2 183 41.0
Gorai.002G094000 Gossypium raimondii HOM05D014067 ORTHO05D010665 1.2e-10 70.9 178 37.1
Haze_09748 Corylus avellana HOM05D014737 ORTHO05D010665 2.1e-10 70.1 136 44.1
FAN25G1967 Fragaria x ananassa HOM05D010366 ORTHO05D010665 2.1e-10 70.1 168 36.3
Cfa020275 Carpinus fangiana HOM05D014737 ORTHO05D010665 2.7e-10 69.7 138 44.2
Actinidia10752 Actinidia chinensis HOM05D014067 ORTHO05D010665 3.5e-10 69.3 148 39.2
MSTRG.18893 Avicennia marina HOM05D023850 ORTHO05D010665 7.8e-10 68.2 111 42.3
Manes.03G136520 Manihot esculenta HOM05D014737 ORTHO05D010665 2.3e-09 66.6 179 38.0
TWI38G1505 Tripterygium wilfordii HOM05D000701 ORTHO05D000531 5.1e-09 65.5 167 36.5
COL.COLO4_09739 Corchorus olitorius HOM05D014067 ORTHO05D010665 1.1e-08 64.3 178 34.8
QL08p007600 Quercus lobata HOM05D014067 ORTHO05D010665 1.5e-08 63.9 134 37.3
FAN21G0023 Fragaria x ananassa HOM05D014737 ORTHO05D010665 1.2e-07 60.8 182 32.4
FAN11G2217 Fragaria x ananassa HOM05D014737 ORTHO05D010665 2.8e-07 59.7 181 32.0
Prupe.4G011600 Prunus persica HOM05D010366 ORTHO05D010665 2.8e-07 59.7 205 32.7
CAN.G337.54 Capsicum annuum HOM05D014067 ORTHO05D010665 3.6e-07 59.3 112 36.6
FAN25G3615 Fragaria x ananassa HOM05D014737 ORTHO05D010665 4.7e-07 58.9 183 32.2
FvH4_3g23561 Fragaria vesca HOM05D014737 ORTHO05D010665 2.4e-06 56.6 175 31.4
Glyma.14G018150 Glycine max HOM05D014737 ORTHO05D010665 3.1e-06 56.2 136 33.8
Glyma.17G008900 Glycine max HOM05D016623 ORTHO05D019225 5.2e-06 55.5 122 34.4
FAN16G0124 Fragaria x ananassa HOM05D014737 ORTHO05D010665 6.8e-06 55.1 181 31.5


User provided reference genes

Program Settings