Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 0.0e+00 1331.2 721 100.0
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 6.3e-132 475.7 711 45.0
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 6.1e-119 432.6 695 43.3
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 9.1e-107 392.1 721 38.1
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 2.5e-96 357.5 707 38.0
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.2e-95 355.1 683 40.3
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 2.8e-92 344.0 711 37.7
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 4.3e-88 330.1 637 38.3
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 2.8e-87 327.4 709 36.8
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 3.2e-83 313.9 732 35.7
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 7.8e-82 309.3 724 34.4
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 8.3e-76 289.3 821 32.5
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.3e-73 282.0 693 33.9
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 5.0e-73 280.0 714 33.3
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.1e-71 274.6 706 31.9
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 2.8e-71 274.2 751 33.6
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.1e-70 272.3 706 33.0
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.0e-70 270.4 709 31.3
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.2e-67 260.8 707 31.8
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.1e-66 258.1 712 32.0
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 6.0e-66 256.5 716 31.7
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.8e-66 256.1 719 32.0
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.1e-65 253.4 710 31.3
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.3e-64 250.4 719 31.6
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.8e-63 247.7 538 35.9
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.8e-62 245.0 772 33.9
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 2.3e-62 244.6 772 34.2
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.8e-62 243.0 717 30.5
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 2.0e-61 241.5 734 30.9
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.3e-60 238.8 712 30.5
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.4e-60 236.5 739 29.2
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.5e-58 230.7 718 30.1
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 4.6e-58 230.3 724 30.2
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.0e-57 229.2 708 31.2
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 3.3e-56 224.2 719 29.9
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 2.8e-55 221.1 718 29.9
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.6e-55 220.7 777 31.4
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 6.2e-55 219.9 801 31.2
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.1e-54 219.2 715 27.8
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 6.9e-54 216.5 713 28.8
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 9.0e-54 216.1 752 30.3
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.5e-53 215.3 726 35.4
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 7.6e-53 213.0 706 29.0
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 2.4e-51 208.0 937 26.9
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.2e-50 205.7 532 32.9
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.0e-49 202.6 721 29.5
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.3e-49 202.2 695 30.5
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 2.5e-48 198.0 385 35.6
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 3.3e-48 197.6 813 30.8
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 5.6e-48 196.8 293 46.1
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 4.0e-46 190.7 725 28.8
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 5.3e-46 190.3 820 30.0
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 9.0e-46 189.5 149 65.8
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 2.4e-43 181.4 734 28.3
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 9.3e-43 179.5 158 58.2
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.2e-42 179.1 761 26.4
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 7.9e-42 176.4 571 32.9
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 8.7e-41 172.9 502 33.5
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.1e-40 172.6 299 41.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.5e-40 171.4 212 50.0
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 2.5e-40 171.4 714 28.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 4.3e-40 170.6 521 30.9
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.8e-39 167.9 638 29.3
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 2.8e-39 167.9 723 27.9
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 3.7e-39 167.5 437 31.4
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.1e-38 166.0 305 40.3
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.4e-38 164.9 305 40.0
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 5.3e-38 163.7 714 27.7
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 6.9e-38 163.3 411 30.7
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 6.9e-38 163.3 717 25.9
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.3e-36 159.1 423 34.3
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 3.8e-36 157.5 429 34.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 6.4e-36 156.8 423 33.6
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 8.4e-36 156.4 285 40.0
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 9.3e-35 152.9 126 61.9
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.2e-34 152.5 750 25.7
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 1.1e-32 146.0 147 53.7
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.8e-31 141.4 146 50.0
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 2.8e-31 141.4 646 26.2
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.1e-30 137.9 573 27.4
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.2e-29 136.0 152 47.4
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 4.2e-27 127.5 137 50.4
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 4.6e-26 124.0 136 49.3
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.3e-25 122.5 129 49.6
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 1.8e-25 122.1 136 50.0
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.3e-25 121.7 129 48.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 3.0e-25 121.3 129 48.1
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 5.1e-25 120.6 129 48.8
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 9.7e-24 116.3 201 37.3
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.6e-23 115.5 176 40.3
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 2.8e-23 114.8 203 36.5
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 2.8e-23 114.8 375 30.1
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 3.7e-23 114.4 156 42.9
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 8.2e-23 113.2 134 44.8
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.4e-22 112.5 149 42.3
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 3.1e-22 111.3 164 42.1
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 1.3e-20 105.9 381 29.9
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.9e-20 104.8 136 36.0
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 3.8e-20 104.4 151 41.7
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 2.5e-19 101.7 142 38.0
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.9e-17 94.4 147 34.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.1e-16 92.8 161 33.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.1e-16 92.8 161 33.5
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 5.7e-16 90.5 66 62.1
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 9.7e-16 89.7 109 41.3
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 6.3e-15 87.0 175 32.6
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.4e-14 85.1 129 34.9
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 1.7e-12 79.0 139 33.1
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.9e-11 75.5 169 33.1
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 7.9e-10 70.1 698 22.6
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 6.7e-09 67.0 135 34.1
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.6e-08 65.1 120 32.5
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 4.4e-08 64.3 103 36.9


User provided reference genes

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