Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 1.3e-114 416.4 213 100.0
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 3.8e-93 345.1 217 80.2
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 2.4e-92 342.4 216 79.2
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 1.8e-90 336.3 213 78.9
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 1.5e-89 333.2 219 78.1
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 1.1e-87 327.0 225 73.3
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 4.0e-87 325.1 217 76.0
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 3.4e-86 322.0 218 74.8
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 4.5e-86 321.6 219 73.5
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 5.8e-86 321.2 219 73.1
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 7.6e-86 320.9 221 74.2
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 7.6e-86 320.9 225 72.9
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 1.7e-85 319.7 224 73.2
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 1.7e-85 319.7 220 73.6
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 2.9e-85 318.9 213 71.8
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 3.8e-85 318.5 224 72.3
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 4.9e-85 318.2 217 74.2
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 6.5e-85 317.8 218 71.1
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.1e-84 317.0 219 71.7
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 7.1e-84 314.3 211 75.8
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 9.3e-84 313.9 225 72.4
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 9.3e-84 313.9 218 72.9
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 9.3e-84 313.9 220 70.5
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 1.6e-83 313.2 223 70.9
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 2.7e-83 312.4 228 71.1
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 6.0e-83 311.2 220 69.5
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 7.9e-83 310.8 222 70.3
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 1.0e-82 310.5 222 69.4
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 1.8e-82 309.7 219 68.5
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 1.8e-82 309.7 221 69.2
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 1.8e-82 309.7 222 69.8
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 2.3e-82 309.3 219 71.7
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.0e-82 308.9 218 70.6
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 3.9e-82 308.5 219 68.5
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 3.9e-82 308.5 217 71.4
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 6.7e-82 307.8 216 70.8
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 8.7e-82 307.4 217 70.5
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 1.1e-81 307.0 220 70.9
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 1.1e-81 307.0 217 70.0
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.1e-81 307.0 217 70.5
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 1.1e-81 307.0 225 68.4
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 1.5e-81 306.6 219 70.8
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 1.9e-81 306.2 216 70.8
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 2.5e-81 305.8 216 72.2
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 3.3e-81 305.4 220 67.7
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 4.3e-81 305.1 219 70.3
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 5.7e-81 304.7 226 68.6
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 7.4e-81 304.3 248 64.9
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 9.6e-81 303.9 228 69.3
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 1.6e-80 303.1 218 70.2
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 2.1e-80 302.8 215 69.8
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 2.1e-80 302.8 216 69.9
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 3.7e-80 302.0 220 65.9
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 4.8e-80 301.6 216 69.9
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 6.2e-80 301.2 220 67.7
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 6.2e-80 301.2 214 71.0
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 8.2e-80 300.8 227 67.8
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 8.2e-80 300.8 216 69.9
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 1.1e-79 300.4 220 68.2
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 1.4e-79 300.1 220 68.2
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.8e-79 299.7 217 68.7
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 2.4e-79 299.3 230 64.8
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 3.1e-79 298.9 216 67.6
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 3.1e-79 298.9 210 69.5
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 5.3e-79 298.1 220 66.8
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 5.3e-79 298.1 219 67.6
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 6.9e-79 297.7 217 71.0
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 6.9e-79 297.7 220 65.5
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 6.9e-79 297.7 219 68.0
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 9.0e-79 297.4 214 68.7
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 9.0e-79 297.4 220 67.7
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 1.2e-78 297.0 245 63.3
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 1.5e-78 296.6 215 69.8
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 1.5e-78 296.6 217 67.7
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.5e-78 296.6 228 68.0
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 2.0e-78 296.2 259 61.8
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 2.6e-78 295.8 219 66.7
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 2.6e-78 295.8 219 66.7
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 3.4e-78 295.4 218 67.9
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 3.4e-78 295.4 217 65.9
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 4.5e-78 295.0 220 66.4
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 4.5e-78 295.0 220 66.4
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 4.5e-78 295.0 220 69.1
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 5.8e-78 294.7 231 64.9
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 5.8e-78 294.7 216 67.1
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 5.8e-78 294.7 217 65.4
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 7.6e-78 294.3 225 66.7
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 7.6e-78 294.3 221 63.8
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 1.0e-77 293.9 206 73.3
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 1.7e-77 293.1 217 65.9
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.7e-77 293.1 231 66.2
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 2.9e-77 292.4 181 79.0
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 3.8e-77 292.0 235 63.0
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 3.8e-77 292.0 215 64.7
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 5.0e-77 291.6 216 66.7
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 8.4e-77 290.8 221 64.3
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 1.9e-76 289.7 217 64.5
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 7.2e-76 287.7 222 64.0
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 1.6e-75 286.6 193 74.6
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 3.5e-75 285.4 220 66.4
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 6.1e-75 284.6 220 65.5
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 1.8e-74 283.1 219 61.6
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 1.5e-73 280.0 262 56.5
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 1.5e-73 280.0 216 64.4
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 1.6e-72 276.6 212 67.5
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 6.9e-71 271.2 162 80.2
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 9.0e-71 270.8 220 60.9
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 3.4e-70 268.9 204 66.7
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 1.3e-69 266.9 252 56.7
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 1.7e-69 266.5 175 75.4
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 5.0e-69 265.0 208 66.3
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 4.6e-67 258.5 222 61.3
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 1.1e-63 247.3 210 61.9
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 6.9e-63 244.6 191 66.0
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.1e-60 237.3 217 58.5
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 4.8e-56 221.9 123 82.9
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.1e-55 220.7 132 74.2
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 1.2e-54 217.2 218 51.8
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 1.6e-54 216.9 238 47.5
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.0e-50 204.1 224 54.0
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 1.4e-50 203.8 116 81.9
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 3.3e-49 199.1 245 46.1
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 6.3e-48 194.9 201 47.3
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 1.5e-44 183.7 244 42.2
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 7.5e-41 171.4 100 81.0
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 6.5e-37 158.3 251 37.5
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.1e-35 153.3 170 50.0
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 2.0e-30 136.7 182 44.0
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 1.2e-27 127.5 248 37.1
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 5.4e-15 85.5 43 90.7
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 9.5e-12 74.7 43 76.7
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 4.0e-10 69.3 38 81.6
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 4.0e-10 69.3 66 56.1
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 9.8e-09 64.7 207 29.5
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 4.9e-08 62.4 81 45.7


User provided reference genes

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