Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 5.1e-173 610.9 294 100.0
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 2.3e-88 329.7 275 63.6
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 5.4e-82 308.5 285 56.8
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 3.5e-81 305.8 278 56.8
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 6.0e-81 305.1 282 58.2
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 7.8e-81 304.7 280 61.1
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 2.3e-80 303.1 298 56.0
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 3.9e-80 302.4 278 58.3
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.9e-79 300.1 282 58.2
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 7.3e-79 298.1 281 60.5
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 7.3e-79 298.1 279 56.3
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 1.2e-78 297.4 278 57.2
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 4.7e-78 295.4 282 57.8
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 1.8e-77 293.5 287 59.2
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 2.3e-77 293.1 276 56.2
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 6.8e-77 291.6 273 59.0
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 2.0e-76 290.0 282 57.4
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.2e-73 280.8 281 55.5
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 7.8e-73 278.1 295 55.6
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 6.6e-72 275.0 281 58.0
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 8.6e-72 274.6 283 56.2
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 4.3e-71 272.3 315 50.2
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 9.9e-68 261.2 277 50.9
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 9.9e-68 261.2 283 52.7
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 9.9e-68 261.2 279 53.0
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 2.9e-67 259.6 284 53.5
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 2.9e-67 259.6 278 52.9
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 6.4e-67 258.5 278 52.9
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 8.4e-67 258.1 275 52.7
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 1.9e-66 256.9 278 52.9
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 2.4e-66 256.5 272 50.4
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 7.1e-66 255.0 281 53.0
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 9.3e-66 254.6 289 50.9
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 1.2e-65 254.2 278 54.7
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 1.6e-65 253.8 281 52.3
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.6e-65 253.8 276 49.6
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 2.1e-65 253.4 276 49.3
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 2.7e-65 253.1 273 51.6
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 3.5e-65 252.7 273 51.6
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 3.5e-65 252.7 302 50.0
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 7.8e-65 251.5 281 52.0
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 3.9e-64 249.2 278 52.2
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 5.1e-64 248.8 265 52.1
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 8.7e-64 248.1 278 52.5
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 1.1e-63 247.7 276 49.6
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 1.3e-62 244.2 273 50.9
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.6e-62 243.8 323 47.4
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 1.6e-62 243.8 281 48.8
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 4.8e-62 242.3 293 51.2
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 1.1e-61 241.1 284 51.1
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 4.0e-61 239.2 297 52.5
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 1.5e-60 237.3 281 48.8
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 2.0e-60 236.9 281 47.7
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 2.0e-60 236.9 250 55.2
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 3.4e-60 236.1 247 57.1
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.3e-59 234.2 316 46.8
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 3.8e-59 232.6 281 47.7
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.4e-58 230.7 281 49.8
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 1.9e-58 230.3 275 48.7
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 7.1e-58 228.4 284 48.9
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 7.1e-58 228.4 336 42.3
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 9.3e-58 228.0 277 47.3
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 3.5e-57 226.1 275 47.3
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 4.6e-57 225.7 288 51.4
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 1.8e-56 223.8 278 49.3
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 1.1e-55 221.1 280 48.6
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 4.0e-53 212.6 282 50.0
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 5.3e-53 212.2 302 44.7
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 6.9e-53 211.8 284 49.6
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 6.9e-53 211.8 282 46.1
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 9.0e-53 211.5 310 45.8
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 1.2e-52 211.1 277 44.4
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 2.0e-52 210.3 230 53.0
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 4.5e-52 209.1 305 47.9
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 1.3e-51 207.6 307 48.5
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 1.7e-51 207.2 276 44.6
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 1.7e-51 207.2 276 44.6
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 4.9e-51 205.7 278 46.0
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 1.1e-50 204.5 298 46.3
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 1.1e-50 204.5 216 54.6
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 2.4e-50 203.4 280 45.0
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 1.2e-49 201.1 331 41.7
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 6.0e-49 198.7 285 45.3
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 7.9e-49 198.4 324 42.3
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 2.5e-47 193.4 178 53.9
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 7.4e-47 191.8 283 46.3
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 3.7e-46 189.5 207 52.7
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 3.7e-46 189.5 280 46.4
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 5.3e-45 185.7 203 49.3
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.2e-44 184.5 281 42.3
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 5.8e-44 182.2 275 41.5
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 6.5e-43 178.7 265 46.0
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 4.2e-42 176.0 117 78.6
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 1.6e-41 174.1 238 46.6
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 1.3e-38 164.5 196 54.6
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.1e-37 161.4 296 41.2
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 2.4e-37 160.2 283 41.3
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 4.1e-37 159.5 294 39.5
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 2.2e-35 153.7 283 42.0
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 3.6e-33 146.4 283 40.6
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 2.3e-32 143.7 276 40.2
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 5.1e-32 142.5 281 38.8
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 1.5e-31 141.0 212 46.7
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 3.3e-31 139.8 308 39.3
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 1.4e-29 134.4 281 40.6
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 2.4e-29 133.7 278 38.8
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 2.4e-29 133.7 199 47.2
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 9.1e-29 131.7 282 39.0
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 2.6e-28 130.2 176 44.9
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 2.5e-26 123.6 282 35.8
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 7.9e-25 118.6 302 36.8
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 8.8e-24 115.2 295 36.9
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 1.5e-23 114.4 290 34.5
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 9.7e-23 111.7 283 36.4
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.3e-22 111.3 282 36.9
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 1.3e-22 111.3 273 36.6
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 1.1e-21 108.2 281 37.4
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 5.3e-21 105.9 283 35.7
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 5.0e-19 99.4 286 35.7
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 2.5e-18 97.1 277 35.4
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 3.2e-18 96.7 282 35.5
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 1.4e-16 91.3 281 33.8
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 1.4e-16 91.3 281 33.8
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 1.8e-16 90.9 280 33.9
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 3.7e-14 83.2 90 50.0
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 2.4e-13 80.5 197 38.1
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 5.0e-11 72.8 47 66.0
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 1.2e-09 68.2 144 39.6
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 4.7e-09 66.2 152 36.8
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.5e-07 61.2 291 29.2


User provided reference genes

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