Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0588 Trochodendron aralioides HOM05D005122 ORTHO05D006057 0.0e+00 1162.9 621 100.0
GSVIVG01015020001 Vitis vinifera HOM05D005122 ORTHO05D006057 9.8e-134 481.5 633 49.3
Nn8g38537 Nelumbo nucifera HOM05D005122 ORTHO05D006057 1.2e-128 464.5 643 50.5
Dinv42429 Davidia involucrata HOM05D005122 ORTHO05D006057 1.4e-127 461.1 634 50.2
Haze_26065 Corylus avellana HOM05D005122 ORTHO05D006057 2.4e-119 433.7 631 47.4
Cfa002940 Carpinus fangiana HOM05D005122 ORTHO05D006057 1.6e-115 421.0 617 48.1
CSS0025527 Camellia sinensis var. sinensis HOM05D005122 ORTHO05D006057 1.0e-114 418.3 660 45.8
Ciclev10007237m.g Citrus clementina HOM05D005122 ORTHO05D006057 1.4e-108 397.9 631 45.8
Thecc.09G070600 Theobroma cacao HOM05D005122 ORTHO05D006057 4.2e-108 396.4 641 44.6
CiPaw.03G200700 Carya illinoinensis HOM05D005122 ORTHO05D006057 5.4e-108 396.0 629 45.8
QL11p002844 Quercus lobata HOM05D005122 ORTHO05D006057 2.7e-107 393.7 736 42.0
Duzib168G0854 Durio zibethinus HOM05D005122 ORTHO05D006057 1.7e-101 374.4 638 42.3
MBI19_g37996_MAGBIO Magnolia biondii HOM05D005122 ORTHO05D006057 1.1e-100 371.7 662 42.3
Rhsim05G0002500 Rhododendron simsii HOM05D005122 ORTHO05D006057 3.5e-99 366.7 613 43.9
Potri.006G136900 Populus trichocarpa HOM05D005122 ORTHO05D006057 1.3e-98 364.8 678 41.7
Lj4A920G55 Lonicera japonica HOM05D005122 ORTHO05D006057 5.1e-98 362.8 632 43.0
Prupe.7G192500 Prunus persica HOM05D005122 ORTHO05D006057 1.2e-94 351.7 619 43.1
COL.COLO4_21211 Corchorus olitorius HOM05D005122 ORTHO05D006057 2.2e-93 347.4 636 40.7
Cpa.g.sc82.66 Carica papaya HOM05D005122 ORTHO05D006057 6.5e-93 345.9 621 43.2
Manes.16G092800 Manihot esculenta HOM05D005122 ORTHO05D006057 3.2e-92 343.6 639 41.3
Rhsim03G0225900 Rhododendron simsii HOM05D005122 ORTHO05D006057 4.6e-91 339.7 622 42.0
TWI34G1091 Tripterygium wilfordii HOM05D005122 ORTHO05D006057 1.9e-89 334.3 634 41.2
Gohir.A05G035900 Gossypium hirsutum HOM05D005122 ORTHO05D006057 1.3e-88 331.6 633 40.3
Gohir.D05G037400 Gossypium hirsutum HOM05D005122 ORTHO05D006057 1.6e-88 331.3 633 40.1
Gorai.009G037900 Gossypium raimondii HOM05D005122 ORTHO05D006057 4.8e-88 329.7 633 40.0
Nitab4.5_0000170g0030 Nicotiana tabacum HOM05D005122 ORTHO05D006057 6.2e-88 329.3 634 39.9
MD15G1223300 Malus domestica HOM05D005122 ORTHO05D006057 7.9e-83 312.4 632 39.2
Peaxi162Scf00191g00046 Petunia axillaris HOM05D005122 ORTHO05D006057 7.9e-83 312.4 633 38.7
Glyma.17G045900 Glycine max HOM05D005122 ORTHO05D006057 2.3e-82 310.8 634 39.4
Nitab4.5_0007169g0020 Nicotiana tabacum HOM05D005122 ORTHO05D006057 3.0e-82 310.5 632 38.9
Aqoxy7G00978 Aquilegia oxysepala HOM05D005122 ORTHO05D006057 3.9e-82 310.1 644 39.8
FAN19G2002 Fragaria x ananassa HOM05D005122 ORTHO05D006057 1.9e-81 307.8 643 38.6
RcHm_v2.0_Chr2g0095891 Rosa chinensis HOM05D005122 ORTHO05D006057 1.9e-81 307.8 616 39.3
DCAR_028528 Daucus carota HOM05D005122 ORTHO05D006057 7.4e-81 305.8 627 38.9
arahy.Tifrunner.gnm1.ann1.C788P2 Arachis hypogaea HOM05D005122 ORTHO05D006057 2.2e-80 304.3 658 36.8
Sabra06G0107000 Salix brachista HOM05D005122 ORTHO05D006057 2.8e-80 303.9 669 38.1
FvH4_1g09310 Fragaria vesca HOM05D005122 ORTHO05D006057 3.7e-80 303.5 665 37.7
Atru.chr7.1762 Acer truncatum HOM05D005122 ORTHO05D006057 8.2e-80 302.4 528 44.5
PGSC0003DMG400013574 Solanum tuberosum HOM05D005122 ORTHO05D006057 1.8e-79 301.2 635 38.6
Glyma.13G113900 Glycine max HOM05D005122 ORTHO05D006057 2.4e-79 300.8 635 38.6
CAN.G210.4 Capsicum annuum HOM05D005122 ORTHO05D006057 5.9e-78 296.2 653 37.8
FAN28G0954 Fragaria x ananassa HOM05D005122 ORTHO05D006057 2.2e-77 294.3 620 39.0
Solyc07g042500.4 Solanum lycopersicum HOM05D005122 ORTHO05D006057 2.9e-77 293.9 630 38.6
arahy.Tifrunner.gnm1.ann1.EYQ1XG Arachis hypogaea HOM05D005122 ORTHO05D006057 2.5e-76 290.8 658 35.9
Lj4g0009327 Lotus japonicus HOM05D005122 ORTHO05D006057 5.5e-76 289.7 640 37.8
Sopen07g022170 Solanum pennellii HOM05D005122 ORTHO05D006057 2.3e-74 284.3 630 37.9
MD02G1100300 Malus domestica HOM05D005122 ORTHO05D006057 3.9e-74 283.5 641 37.6
VMungo1215G1386 Vigna mungo HOM05D005122 ORTHO05D006057 1.3e-72 278.5 670 36.6
Eucgr.C00770 Eucalyptus grandis HOM05D005122 ORTHO05D006057 6.3e-72 276.2 642 39.3
Ca_21337_v3 Cicer arietinum L. HOM05D005122 ORTHO05D006057 5.3e-71 273.1 654 36.7
Ca_30968_v3 Cicer arietinum L. HOM05D005122 ORTHO05D006057 5.3e-71 273.1 654 36.7
CANSAT56G0085 Cannabis sativa HOM05D005122 ORTHO05D006057 1.5e-70 271.6 637 36.4
vmacro06355 Vaccinium macrocarpon HOM05D005122 ORTHO05D006057 7.7e-70 269.2 623 36.6
Cc06_g12660 Coffea canephora HOM05D005122 ORTHO05D006057 1.3e-69 268.5 644 37.7
PGR142G3115 Punica granatum HOM05D005122 ORTHO05D006057 4.2e-68 263.5 625 36.6
TPR.G12583 Trifolium pratense HOM05D005122 ORTHO05D006057 5.5e-68 263.1 636 36.9
ClCG11G000010 Citrullus lanatus HOM05D005122 ORTHO05D006057 2.1e-67 261.2 635 36.9
Lalb_Chr13g0299211 Lupinus albus HOM05D005122 ORTHO05D006057 4.4e-65 253.4 693 32.9
THA.LOC104811288 Tarenaya hassleriana HOM05D005122 ORTHO05D006057 9.7e-65 252.3 641 35.4
Psat4g019280 Pisum sativum HOM05D005122 ORTHO05D006057 4.8e-64 250.0 636 36.2
Phvul.003G127600 Phaseolus vulgaris HOM05D005122 ORTHO05D006057 1.1e-63 248.8 668 34.7
PSO104G0049 Papaver somniferum HOM05D005122 ORTHO05D006057 7.0e-63 246.1 655 33.7
Sc08g0009130 Simmondsia chinensis HOM05D005122 ORTHO05D006057 7.0e-63 246.1 667 35.1
ATR0681G090 Amborella trichopoda HOM05D005122 ORTHO05D006057 1.2e-62 245.4 681 33.6
MELO3C022901.2 Cucumis melo HOM05D005122 ORTHO05D006057 1.2e-62 245.4 646 34.4
CANSAT56G2058 Cannabis sativa HOM05D005122 ORTHO05D006057 1.3e-61 241.9 637 35.5
Hund26106 Selenicereus undatus HOM05D005122 ORTHO05D006057 1.4e-58 231.9 621 36.2
CsaV3_5G027680 Cucumis sativus L. HOM05D005122 ORTHO05D006057 3.0e-58 230.7 624 34.0
PSO421G0465 Papaver somniferum HOM05D005122 ORTHO05D006057 9.7e-57 225.7 659 32.2
Medtr4g124670 Medicago truncatula HOM05D005122 ORTHO05D006057 3.7e-56 223.8 708 31.8
EL10Ac8g18978 Beta vulgaris HOM05D005122 ORTHO05D006057 7.7e-54 216.1 632 34.8
Migut.J00884 Erythranthe guttata HOM05D005122 ORTHO05D006057 1.0e-53 215.7 636 32.7
MSTRG.19429 Avicennia marina HOM05D005122 ORTHO05D006057 9.4e-52 209.1 634 33.8
SGA_v2.0_scaffold31G12693 Striga asiatica HOM05D005122 ORTHO05D006057 2.7e-51 207.6 628 32.5
AUR62028313 Chenopodium quinoa HOM05D005122 ORTHO05D006057 1.0e-50 205.7 638 32.8
Sed0023749 Sechium edule HOM05D005122 ORTHO05D006057 8.8e-50 202.6 606 33.7
AL5G12790 Arabidopsis lyrata HOM05D005122 ORTHO05D006057 2.8e-48 197.6 699 32.2
Carub.0005s0197 Capsella rubella HOM05D005122 ORTHO05D006057 4.8e-48 196.8 695 33.8
SalBow6G0425 Salvia bowleyana HOM05D005122 ORTHO05D006057 4.5e-46 190.3 637 33.1
AT2G03140 Arabidopsis thaliana HOM05D005122 ORTHO05D006057 3.8e-45 187.2 704 29.7
CDE04G2636 Ceratophyllum demersum HOM05D005122 ORTHO05D006057 5.5e-44 183.3 632 32.6
BolC9t58866H Brassica oleracea HOM05D005122 ORTHO05D006057 1.2e-43 182.2 690 32.2
AUR62025308 Chenopodium quinoa HOM05D005122 ORTHO05D006057 3.6e-43 180.6 630 32.5
Ah.14g084680 Amaranthus hybridus HOM05D005122 ORTHO05D006057 6.1e-43 179.9 632 31.2
BcaC04g18854 Brassica carinata HOM05D005122 ORTHO05D006057 8.8e-42 176.0 690 31.3
ECA234G0156 Erigeron canadensis HOM05D005122 ORTHO05D006057 1.2e-41 175.6 628 31.2
C09p60330 Brassica napus HOM05D005122 ORTHO05D006057 2.0e-41 174.9 670 30.4
Aa31LG4G13020 Aethionema arabicum HOM05D005122 ORTHO05D006057 2.6e-41 174.5 692 28.8
BraA10t44307Z Brassica rapa HOM05D005122 ORTHO05D006057 3.4e-41 174.1 694 31.8
A10p22480 Brassica napus HOM05D005122 ORTHO05D006057 1.1e-39 169.1 695 31.4
Thhalv10012418m.g Eutrema salsugineum HOM05D005122 ORTHO05D006057 2.0e-38 164.9 691 29.8
Sp6g27400 Schrenkiella parvula HOM05D005122 ORTHO05D006057 1.9e-36 158.3 694 29.7
Zm00001eb313890 Zea mays HOM05D005122 ORTHO05D006057 3.3e-36 157.5 627 28.9
QL10p017877 Quercus lobata HOM05D005122 ORTHO05D006057 2.9e-32 144.4 216 46.8
FAN23G0697 Fragaria x ananassa HOM05D005122 ORTHO05D006057 1.8e-26 125.2 228 42.5
SEGI_27630 Sequoiadendron giganteum HOM05D005122 ORTHO05D006057 1.8e-26 125.2 673 26.6
unitig_27.g24782 Utricularia gibba HOM05D005122 ORTHO05D006057 1.5e-25 122.1 626 27.6
HanXRQChr10g0319771 Helianthus annuus HOM05D005122 ORTHO05D006057 4.1e-23 114.0 665 28.6
Oeu045002.1 Olea europaea HOM05D005122 ORTHO05D006057 9.5e-20 102.8 152 44.7
QL10p017739 Quercus lobata HOM05D005122 ORTHO05D006057 6.2e-19 100.1 74 71.6
SMO228G0085 Selaginella moellendorffii HOM05D005122 ORTHO05D006057 3.5e-14 84.3 353 29.2
HPP92_016227 Vanilla planifolia HOM05D005122 ORTHO05D006057 1.6e-11 75.5 308 28.6
Pp3c18_16020 Physcomitrium patens HOM05D005122 ORTHO05D006057 2.8e-11 74.7 377 29.4
Lsat_1_v5_gn_5_139061 Lactuca sativa HOM05D005122 ORTHO05D006057 1.1e-10 72.8 102 48.0
Pp3c22_7040 Physcomitrium patens HOM05D005122 ORTHO05D006057 9.9e-09 66.2 404 27.2
Actinidia39683 Actinidia chinensis HOM05D002034 ORTHO05D004251 2.4e-07 61.6 93 50.5


User provided reference genes

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