Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0560 Trochodendron aralioides HOM05D004461 ORTHO05D005543 2.2e-82 308.9 157 100.0
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 4.6e-64 248.1 138 92.0
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 9.1e-52 207.2 138 74.6
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 3.6e-48 195.3 138 71.0
Nn1g03495 Nelumbo nucifera HOM05D004461 ORTHO05D005543 1.4e-47 193.4 138 71.7
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 4.4e-46 188.3 138 69.6
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 5.7e-46 188.0 138 70.3
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 5.7e-46 188.0 138 71.0
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 6.3e-45 184.5 138 69.6
CSS0004381 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.4e-44 183.3 138 69.6
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 1.4e-44 183.3 136 69.9
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 3.1e-44 182.2 136 66.9
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 4.1e-44 181.8 138 67.4
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 9.1e-44 180.6 136 66.9
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 1.5e-43 179.9 136 66.2
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 2.0e-43 179.5 138 65.9
Atru.chr4.1504 Acer truncatum HOM05D004461 ORTHO05D005543 2.0e-43 179.5 138 65.9
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 3.8e-42 175.3 138 64.5
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 5.0e-42 174.9 136 64.7
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 6.5e-42 174.5 138 63.8
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 1.9e-41 172.9 138 64.5
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.9e-41 172.9 136 64.0
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 4.2e-41 171.8 138 65.2
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 5.5e-41 171.4 138 63.0
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 1.2e-40 170.2 136 64.0
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 1.6e-40 169.9 139 66.9
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.6e-40 169.9 138 66.7
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 1.6e-40 169.9 136 64.0
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 2.7e-40 169.1 138 63.0
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 3.6e-40 168.7 136 63.2
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 3.6e-40 168.7 136 63.2
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 6.1e-40 167.9 138 58.7
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 6.1e-40 167.9 139 65.5
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 7.9e-40 167.5 136 64.0
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 7.9e-40 167.5 136 65.4
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 2.3e-39 166.0 138 61.6
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 2.3e-39 166.0 136 64.7
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 5.2e-39 164.9 138 57.2
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 5.2e-39 164.9 138 61.6
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 8.8e-39 164.1 138 62.3
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 1.1e-38 163.7 138 63.8
Sed0020878 Sechium edule HOM05D004461 ORTHO05D005543 1.1e-38 163.7 138 63.0
SGA_v2.0_scaffold96G29048 Striga asiatica HOM05D004461 ORTHO05D005543 1.1e-38 163.7 140 60.7
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 2.6e-38 162.5 138 61.6
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 2.6e-38 162.5 140 60.7
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 7.4e-38 161.0 138 60.9
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 1.3e-37 160.2 138 60.9
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 1.3e-37 160.2 136 61.8
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 2.2e-37 159.5 138 60.1
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 3.7e-37 158.7 138 60.1
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 3.7e-37 158.7 138 60.1
Sed0010516 Sechium edule HOM05D004461 ORTHO05D005543 1.4e-36 156.8 138 60.9
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 4.1e-36 155.2 138 58.7
Gohir.A02G008301 Gossypium hirsutum HOM05D004461 ORTHO05D005543 5.3e-36 154.8 138 59.4
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 7.0e-36 154.5 143 56.6
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 7.0e-36 154.5 136 62.5
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 2.0e-35 152.9 138 60.9
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 2.6e-35 152.5 146 56.8
Gohir.D02G008532 Gossypium hirsutum HOM05D004461 ORTHO05D005543 3.5e-35 152.1 146 58.2
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 3.5e-35 152.1 146 58.2
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 3.5e-35 152.1 136 60.3
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 4.5e-35 151.8 138 58.7
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 4.5e-35 151.8 138 58.7
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 4.5e-35 151.8 136 60.3
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 4.5e-35 151.8 136 59.6
Ah.13g073400 Amaranthus hybridus HOM05D004461 ORTHO05D005543 1.0e-34 150.6 138 55.8
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 1.0e-34 150.6 136 58.8
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 2.9e-34 149.1 136 58.1
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 1.1e-33 147.1 138 56.5
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 1.5e-33 146.7 138 55.8
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 3.2e-33 145.6 136 58.1
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 3.2e-33 145.6 136 61.0
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 3.2e-33 145.6 138 56.5
Solyc08g044400.3 Solanum lycopersicum HOM05D004461 ORTHO05D005543 7.2e-33 144.4 138 55.8
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 9.4e-33 144.1 138 56.5
Peaxi162Scf00883g00910 Petunia axillaris HOM05D004461 ORTHO05D005543 1.2e-32 143.7 138 55.1
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 2.1e-32 142.9 136 57.4
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 2.1e-32 142.9 136 58.1
MBI11_g07551_MAGBIO Magnolia biondii HOM05D004461 ORTHO05D005543 2.7e-32 142.5 136 60.3
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 4.7e-32 141.7 136 54.4
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 4.7e-32 141.7 138 57.2
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 1.8e-31 139.8 136 59.6
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 2.3e-31 139.4 138 52.9
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 4.0e-31 138.7 138 52.2
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 4.0e-31 138.7 138 52.2
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 4.0e-31 138.7 138 54.3
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 1.2e-30 137.1 99 71.7
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 2.6e-30 136.0 138 52.9
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 2.6e-30 136.0 136 55.9
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 3.3e-30 135.6 138 52.9
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 3.3e-30 135.6 138 52.9
THA.LOC104802333 Tarenaya hassleriana HOM05D004461 ORTHO05D005543 5.7e-30 134.8 138 54.3
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 7.5e-30 134.4 138 50.7
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 7.5e-30 134.4 138 52.2
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 7.5e-30 134.4 138 52.2
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 1.3e-29 133.7 138 51.4
CDE04G2300 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 1.7e-29 133.3 138 55.1
CARHR170110 Cardamine hirsuta HOM05D004461 ORTHO05D005543 2.2e-29 132.9 136 52.2
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 4.8e-29 131.7 138 50.0
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 4.8e-29 131.7 138 50.7
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 4.8e-29 131.7 138 50.7
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 4.8e-29 131.7 138 50.7
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 4.8e-29 131.7 138 51.4
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 6.3e-29 131.3 138 50.7
Nitab4.5_0000474g0020 Nicotiana tabacum HOM05D004461 ORTHO05D005543 8.2e-29 131.0 138 52.9
SEGI_12893 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 1.4e-28 130.2 142 53.5
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 3.1e-28 129.0 142 51.4
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 7.7e-27 124.4 200 39.5
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 1.3e-26 123.6 138 47.1
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 2.2e-26 122.9 136 50.0
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 3.8e-26 122.1 137 51.1
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 5.0e-26 121.7 140 47.9
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 1.1e-25 120.6 150 46.7
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 3.0e-15 85.9 147 38.1
SHI26120 Sapria himalayana HOM05D004461 ORTHO05D005543 8.9e-15 84.3 85 54.1
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 1.5e-14 83.6 136 35.3
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 7.5e-14 81.3 103 46.6
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 2.0e-11 73.2 138 36.2
Lsat_1_v5_gn_3_104101 Lactuca sativa HOM05D004461 ORTHO05D005543 5.0e-10 68.6 110 40.0
Nitab4.5_0002660g0040 Nicotiana tabacum HOM05D004461 ORTHO05D005543 1.5e-09 67.0 52 61.5
vmacro00709 Vaccinium macrocarpon HOM05D004461 ORTHO05D005543 1.9e-09 66.6 46 71.7
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 5.6e-09 65.1 148 31.1
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 1.2e-08 63.9 151 35.8
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 1.2e-08 63.9 52 61.5
SHI26123 Sapria himalayana HOM05D004461 ORTHO05D029960 8.0e-08 61.2 52 59.6
Sabra19G0110100 Salix brachista HOM05D002050 ORTHO05D001949 1.2e-06 57.4 40 60.0


User provided reference genes

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