Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 0.0e+00 1373.2 713 100.0
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.9e-266 922.5 721 70.2
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 4.0e-264 914.8 701 67.5
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.7e-251 872.8 718 64.1
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 3.2e-245 852.0 684 66.1
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 3.3e-234 815.5 676 62.6
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 3.0e-227 792.3 731 59.8
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 3.2e-221 772.3 725 59.4
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 4.2e-221 771.9 719 59.0
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 3.4e-215 752.3 587 67.1
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 1.6e-209 733.4 733 56.8
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 3.7e-209 732.3 581 65.6
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 1.8e-208 729.9 716 57.3
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 1.3e-206 723.8 711 57.0
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 1.1e-200 704.1 746 53.8
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 2.5e-197 693.0 729 52.8
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 1.8e-195 686.8 741 51.7
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 3.0e-195 686.0 567 61.2
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.0e-194 683.3 555 64.5
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 2.6e-194 682.9 461 71.6
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 9.7e-194 681.0 731 53.1
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 6.3e-193 678.3 669 55.5
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 6.3e-193 678.3 674 55.6
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 1.4e-192 677.2 586 60.9
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 4.1e-192 675.6 734 51.2
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 7.0e-192 674.9 701 52.8
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.6e-191 672.9 520 67.1
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 7.7e-191 671.4 736 52.9
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 8.5e-190 667.9 533 62.7
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 1.1e-189 667.5 513 67.1
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 1.5e-189 667.2 490 67.6
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 3.0e-187 659.4 527 63.4
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 4.0e-187 659.1 717 52.7
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 6.7e-187 658.3 723 51.7
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 2.0e-186 656.8 726 54.0
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.2e-185 653.3 725 50.8
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 8.2e-185 651.4 476 68.5
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 4.1e-184 649.0 476 68.3
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 2.0e-183 646.7 717 51.5
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 3.5e-183 646.0 494 66.4
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.5e-183 645.6 455 70.3
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 7.7e-183 644.8 531 62.1
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 1.3e-182 644.0 682 53.5
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 9.4e-181 637.9 557 60.7
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 1.2e-180 637.5 473 66.8
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.6e-180 637.1 511 63.8
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 8.0e-180 634.8 722 50.3
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 5.2e-179 632.1 534 60.7
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.2e-178 630.9 575 59.1
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 2.2e-177 626.7 582 59.1
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 2.4e-176 623.2 734 48.5
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 3.1e-176 622.9 489 62.4
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 5.0e-174 615.5 456 68.0
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 5.0e-174 615.5 544 59.7
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 7.2e-173 611.7 475 65.1
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 3.7e-169 599.4 474 64.1
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 3.1e-168 596.3 486 60.9
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 5.0e-166 589.0 528 56.6
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 8.6e-166 588.2 439 65.4
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 2.5e-165 586.6 583 54.2
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 9.5e-165 584.7 541 57.5
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 7.0e-160 568.5 627 52.3
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 2.3e-158 563.5 498 57.8
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 1.1e-157 561.2 500 58.4
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.9e-157 560.5 741 46.8
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 2.1e-156 557.0 583 52.3
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.9e-152 543.9 433 61.9
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 4.6e-135 486.1 471 55.0
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 2.3e-134 483.8 359 64.3
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 1.9e-120 437.6 287 72.8
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 2.3e-118 430.6 486 51.0
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 3.4e-114 416.8 310 66.1
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 1.9e-112 411.0 456 47.1
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.4e-99 368.2 268 67.5
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.1e-91 340.1 504 44.4
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 3.0e-86 323.9 370 48.1
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 9.7e-85 318.9 288 58.3
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 4.8e-84 316.6 328 55.8
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 1.2e-66 258.8 280 50.0
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.4e-59 235.3 192 59.4
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.9e-40 171.8 133 54.9
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 5.2e-38 163.7 133 63.2
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 2.0e-37 161.8 151 58.9
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 6.4e-36 156.8 355 36.1
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.6e-31 142.1 522 28.0
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 2.2e-28 131.7 78 73.1
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 1.4e-19 102.4 126 46.8
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 6.9e-14 83.6 91 51.6
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.5e-13 82.4 219 33.3
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 2.6e-13 81.6 77 54.5
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 1.3e-12 79.3 237 30.4
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 3.8e-12 77.8 185 28.6
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 1.2e-10 72.8 224 27.2
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 2.3e-09 68.6 206 30.1
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 6.6e-09 67.0 57 52.6
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 3.1e-06 58.2 58 51.7


User provided reference genes

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