Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0507 Trochodendron aralioides HOM05D007725 ORTHO05D009774 5.9e-139 498.4 468 100.0
Dinv10315 Davidia involucrata HOM05D007725 ORTHO05D009774 1.0e-90 338.2 343 82.8
Nn1g03245 Nelumbo nucifera HOM05D007725 ORTHO05D009774 1.3e-85 321.2 469 68.2
CSS0027076 Camellia sinensis var. sinensis HOM05D007725 ORTHO05D009774 5.0e-82 309.3 471 59.0
Haze_09790 Corylus avellana HOM05D007725 ORTHO05D009774 4.4e-78 296.2 472 72.7
Hma1.2p1_2796F.1_g328670 Hydrangea macrophylla HOM05D007725 ORTHO05D009774 1.3e-77 294.7 464 72.6
GSVIVG01037783001 Vitis vinifera HOM05D007725 ORTHO05D009774 4.9e-77 292.7 457 64.8
Peaxi162Scf00955g00014 Petunia axillaris HOM05D007725 ORTHO05D009774 1.4e-76 291.2 469 59.9
Lj1P886T16 Lonicera japonica HOM05D007725 ORTHO05D009774 1.6e-75 287.7 464 65.5
Nn1g03425 Nelumbo nucifera HOM05D007725 ORTHO05D009774 7.8e-75 285.4 456 73.2
VMungo0540G1375 Vigna mungo HOM05D007725 ORTHO05D009774 7.8e-75 285.4 458 62.7
Nitab4.5_0002517g0030 Nicotiana tabacum HOM05D007725 ORTHO05D009774 1.7e-74 284.3 469 58.8
Cpa.g.sc12.189 Carica papaya HOM05D007725 ORTHO05D009774 2.5e-73 280.4 466 70.2
Cfa020227 Carpinus fangiana HOM05D007725 ORTHO05D009774 2.5e-73 280.4 477 66.7
Glyma.08G326100 Glycine max HOM05D007725 ORTHO05D009774 1.2e-72 278.1 458 62.2
Ciclev10008214m.g Citrus clementina HOM05D007725 ORTHO05D009774 1.4e-71 274.6 458 67.5
PGSC0003DMG402029798 Solanum tuberosum HOM05D007725 ORTHO05D009774 1.4e-71 274.6 465 58.5
COL.COLO4_09791 Corchorus olitorius HOM05D007725 ORTHO05D009774 2.3e-71 273.9 459 63.2
Sopen12g007550 Solanum pennellii HOM05D007725 ORTHO05D009774 5.2e-71 272.7 465 58.1
ClCG09G021110 Citrullus lanatus HOM05D007725 ORTHO05D009774 1.2e-70 271.6 456 63.8
Solyc12g015650.3 Solanum lycopersicum HOM05D007725 ORTHO05D009774 5.8e-70 269.2 465 57.8
GSVIVG01037784001 Vitis vinifera HOM05D007725 ORTHO05D009774 2.2e-69 267.3 475 60.0
Cc05_g14730 Coffea canephora HOM05D007725 ORTHO05D009774 2.4e-68 263.8 466 64.4
PSO478G1598 Papaver somniferum HOM05D007725 ORTHO05D009774 3.2e-68 263.5 470 64.5
Nitab4.5_0000163g0300 Nicotiana tabacum HOM05D007725 ORTHO05D009774 7.1e-68 262.3 469 62.7
QL08p005480 Quercus lobata HOM05D007725 ORTHO05D009774 3.3e-65 253.4 470 63.4
Nn1g07446 Nelumbo nucifera HOM05D007725 ORTHO05D009774 5.6e-65 252.7 457 52.1
Duzib170G0716 Durio zibethinus HOM05D007725 ORTHO05D009774 2.8e-64 250.4 451 56.5
Manes.03G138100 Manihot esculenta HOM05D007725 ORTHO05D009774 1.1e-63 248.4 458 69.4
MSTRG.15782 Avicennia marina HOM05D007725 ORTHO05D009774 2.0e-62 244.2 467 59.3
MELO3C024908.2 Cucumis melo HOM05D007725 ORTHO05D009774 3.4e-62 243.4 339 61.7
Psat5g175640 Pisum sativum HOM05D007725 ORTHO05D009774 4.9e-61 239.6 471 63.1
ATR1149G149 Amborella trichopoda HOM05D007725 ORTHO05D009774 2.4e-60 237.3 451 72.1
AUR62040655 Chenopodium quinoa HOM05D007725 ORTHO05D009774 9.3e-60 235.3 464 71.3
DCAR_022605 Daucus carota HOM05D007725 ORTHO05D009774 6.6e-58 229.2 347 58.2
CsaV3_7G018510 Cucumis sativus L. HOM05D007725 ORTHO05D009774 8.7e-58 228.8 339 61.4
AUR62017062 Chenopodium quinoa HOM05D007725 ORTHO05D009774 7.3e-57 225.7 451 71.2
Gohir.A11G277300 Gossypium hirsutum HOM05D007725 ORTHO05D009774 2.6e-54 217.2 342 50.3
Gorai.007G311000 Gossypium raimondii HOM05D007725 ORTHO05D009774 9.9e-54 215.3 342 46.8
EL10Ac4g07611 Beta vulgaris HOM05D007725 ORTHO05D009774 5.4e-52 209.5 338 59.2
Ca_26464_v3 Cicer arietinum L. HOM05D007725 ORTHO05D009774 7.1e-52 209.1 462 49.8
Migut.M01753 Erythranthe guttata HOM05D007725 ORTHO05D009774 6.0e-51 206.1 349 57.0
Medtr3g056580 Medicago truncatula HOM05D007725 ORTHO05D009774 1.3e-50 204.9 354 44.4
HanXRQChr11g0333971 Helianthus annuus HOM05D007725 ORTHO05D009774 1.7e-50 204.5 341 57.5
Oeu005490.1 Olea europaea HOM05D007725 ORTHO05D009774 3.3e-49 200.3 179 57.5
Gohir.D11G287700 Gossypium hirsutum HOM05D007725 ORTHO05D009774 1.6e-48 198.0 333 48.9
CARHR095760 Cardamine hirsuta HOM05D007725 ORTHO05D009774 2.8e-48 197.2 474 56.5
AL3G33870 Arabidopsis lyrata HOM05D007725 ORTHO05D009774 6.2e-48 196.1 471 55.8
AT3G20170 Arabidopsis thaliana HOM05D007725 ORTHO05D009774 1.1e-47 195.3 475 56.6
Sed0002917 Sechium edule HOM05D007725 ORTHO05D009774 2.4e-47 194.1 339 55.5
arahy.Tifrunner.gnm1.ann1.TWJV4J Arachis hypogaea HOM05D007725 ORTHO05D009774 9.0e-47 192.2 353 51.8
arahy.Tifrunner.gnm1.ann1.LCTM2T Arachis hypogaea HOM05D007725 ORTHO05D009774 4.5e-46 189.9 353 51.6
Phvul.006G053700 Phaseolus vulgaris HOM05D007725 ORTHO05D009774 4.5e-46 189.9 363 65.0
Aa31LG8G7000 Aethionema arabicum HOM05D007725 ORTHO05D009774 5.8e-46 189.5 462 56.9
Carub.0003s2010 Capsella rubella HOM05D007725 ORTHO05D009774 7.6e-46 189.1 472 56.1
SEGI_22467 Sequoiadendron giganteum HOM05D007725 ORTHO05D009774 1.3e-45 188.3 442 59.5
C03p50970 Brassica napus HOM05D007725 ORTHO05D009774 6.4e-45 186.0 478 54.6
BolC3t17381H Brassica oleracea HOM05D007725 ORTHO05D009774 2.4e-44 184.1 478 54.6
Sp3g18200 Schrenkiella parvula HOM05D007725 ORTHO05D009774 2.4e-44 184.1 474 54.6
BcaB04g19094 Brassica carinata HOM05D007725 ORTHO05D009774 7.1e-44 182.6 481 55.9
Thhalv10020642m.g Eutrema salsugineum HOM05D007725 ORTHO05D009774 1.6e-43 181.4 475 56.0
SalBow8G2031 Salvia bowleyana HOM05D007725 ORTHO05D009774 7.9e-43 179.1 313 59.1
arahy.Tifrunner.gnm1.ann1.Q8DMES Arachis hypogaea HOM05D007725 ORTHO05D009774 2.3e-42 177.6 340 52.9
TPR.G1953 Trifolium pratense HOM05D007725 ORTHO05D009774 3.9e-42 176.8 354 35.3
A03p41610 Brassica napus HOM05D007725 ORTHO05D009774 8.7e-42 175.6 474 54.2
BraA03t13314Z Brassica rapa HOM05D007725 ORTHO05D009774 8.7e-42 175.6 474 54.2
SGA_v2.0_scaffold168G38532 Striga asiatica HOM05D007725 ORTHO05D009774 9.6e-41 172.2 338 35.2
PGR031G2940 Punica granatum HOM05D007725 ORTHO05D009774 1.4e-39 168.3 352 51.7
C05p44210 Brassica napus HOM05D007725 ORTHO05D009774 2.4e-39 167.5 456 54.6
A05p28800 Brassica napus HOM05D007725 ORTHO05D009774 1.2e-38 165.2 456 54.4
BolC5t33143H Brassica oleracea HOM05D007725 ORTHO05D009774 1.5e-38 164.9 456 54.4
Thecc.07G022000 Theobroma cacao HOM05D007725 ORTHO05D009774 6.5e-37 159.5 171 51.5
Lj2g0017250 Lotus japonicus HOM05D007725 ORTHO05D009774 7.1e-36 156.0 353 32.0
Lj6g0003901 Lotus japonicus HOM05D007725 ORTHO05D009774 1.5e-33 148.3 345 49.3
Lj6g0016094 Lotus japonicus HOM05D007725 ORTHO05D009774 2.8e-32 144.1 345 48.4
Lj6g0024671 Lotus japonicus HOM05D007725 ORTHO05D009774 2.6e-30 137.5 458 50.0
HPP92_006089 Vanilla planifolia HOM05D007725 ORTHO05D009774 1.3e-29 135.2 453 54.5
COL.COLO4_09793 Corchorus olitorius HOM05D007725 ORTHO05D009774 1.9e-28 131.3 193 42.0
BraA05t21757Z Brassica rapa HOM05D007725 ORTHO05D009774 1.2e-22 112.1 171 42.7
BcaC01g03576 Brassica carinata HOM05D007725 ORTHO05D009774 5.9e-22 109.8 159 41.5
TPR.G1910 Trifolium pratense HOM05D007725 ORTHO05D009774 2.8e-16 90.9 74 60.8
BcaC02g11617 Brassica carinata HOM05D007725 ORTHO05D009774 9.4e-12 75.9 50 76.0
CDE04G3331 Ceratophyllum demersum HOM05D000050 ORTHO05D009774 2.6e-06 57.8 72 43.1


User provided reference genes

Program Settings