Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 7.3e-56 220.3 111 100.0
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.4e-38 162.9 102 83.3
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.1e-30 136.7 109 68.8
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 1.3e-23 113.2 115 58.3
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 6.2e-23 110.9 113 54.9
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 8.2e-23 110.5 117 54.7
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 4.0e-22 108.2 106 56.6
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 2.6e-21 105.5 111 55.9
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 8.4e-20 100.5 112 51.8
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.9e-19 99.4 111 51.4
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 2.5e-19 99.0 110 50.9
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 6.0e-18 94.4 122 50.0
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 6.0e-18 94.4 116 50.0
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 1.3e-17 93.2 102 50.0
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 1.8e-17 92.8 109 50.5
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.9e-17 91.7 113 46.0
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 6.7e-17 90.9 101 52.5
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 3.3e-16 88.6 112 50.9
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.3e-16 88.2 102 52.0
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 2.2e-15 85.9 111 44.1
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 4.8e-15 84.7 107 43.0
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 4.8e-15 84.7 111 45.0
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.1e-14 83.6 110 48.2
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 1.1e-14 83.6 105 50.5
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.4e-14 83.2 106 47.2
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 3.1e-14 82.0 115 48.7
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 4.1e-14 81.6 104 47.1
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 4.1e-14 81.6 114 49.1
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 4.1e-14 81.6 101 46.5
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 5.3e-14 81.3 124 47.6
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.3e-14 81.3 108 50.0
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 5.3e-14 81.3 108 50.0
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 6.9e-14 80.9 102 46.1
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 9.0e-14 80.5 100 47.0
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 1.5e-13 79.7 115 44.3
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.0e-13 79.3 107 45.8
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 2.0e-13 79.3 107 43.9
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 2.6e-13 79.0 110 47.3
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 2.6e-13 79.0 102 44.1
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 4.5e-13 78.2 107 43.9
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 5.9e-13 77.8 118 40.7
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 5.9e-13 77.8 117 43.6
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.9e-13 77.8 108 48.1
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 5.9e-13 77.8 103 50.5
Aqoxy1G02175 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 7.6e-13 77.4 100 46.0
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 1.0e-12 77.0 74 60.8
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 1.0e-12 77.0 102 44.1
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.0e-12 77.0 111 46.8
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 1.3e-12 76.6 120 45.8
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 1.3e-12 76.6 112 44.6
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 1.3e-12 76.6 113 41.6
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.7e-12 76.3 106 42.5
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 2.2e-12 75.9 106 44.3
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 3.8e-12 75.1 111 44.1
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 5.0e-12 74.7 103 39.8
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 5.0e-12 74.7 98 44.9
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 5.0e-12 74.7 102 42.2
MBI02_g07158_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 6.5e-12 74.3 75 50.7
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 1.1e-11 73.6 90 48.9
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 1.1e-11 73.6 90 48.9
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 1.4e-11 73.2 111 39.6
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 1.9e-11 72.8 65 55.4
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 1.9e-11 72.8 116 42.2
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.5e-11 72.4 105 41.9
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 2.5e-11 72.4 110 41.8
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 2.5e-11 72.4 65 55.4
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 2.5e-11 72.4 65 55.4
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 3.2e-11 72.0 109 35.8
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 4.2e-11 71.6 121 41.3
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.2e-11 71.6 106 40.6
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 4.2e-11 71.6 112 43.8
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 5.5e-11 71.2 97 42.3
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 7.2e-11 70.9 103 40.8
MBI02_g40709_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 7.2e-11 70.9 75 46.7
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 9.4e-11 70.5 115 41.7
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 9.4e-11 70.5 102 40.2
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 1.2e-10 70.1 65 55.4
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 1.6e-10 69.7 109 38.5
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 1.6e-10 69.7 90 45.6
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 1.6e-10 69.7 85 48.2
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.6e-10 69.7 111 35.1
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 1.6e-10 69.7 106 43.4
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.1e-10 69.3 79 53.2
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 2.1e-10 69.3 110 38.2
Rhsim06G0216700 Rhododendron simsii HOM05D003074 ORTHO05D002434 2.1e-10 69.3 108 43.5
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 3.6e-10 68.6 114 42.1
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 3.6e-10 68.6 114 42.1
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 4.6e-10 68.2 119 41.2
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 4.6e-10 68.2 97 42.3
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 7.9e-10 67.4 102 36.3
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 1.0e-09 67.0 105 39.0
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.4e-09 66.6 62 54.8
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 1.4e-09 66.6 63 50.8
Lalb_Chr15g0081141 Lupinus albus HOM05D003074 ORTHO05D002434 1.8e-09 66.2 57 54.4
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.8e-09 66.2 97 42.3
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.3e-09 65.9 109 46.8
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 2.3e-09 65.9 114 41.2
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 2.3e-09 65.9 101 36.6
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 3.9e-09 65.1 118 37.3
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 3.9e-09 65.1 114 42.1
Nitab4.5_0009995g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 6.7e-09 64.3 67 52.2
Lj6g0015217 Lotus japonicus HOM05D003074 ORTHO05D002434 1.1e-08 63.5 60 56.7
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.5e-08 63.2 103 38.8
AUR62015774 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.5e-08 63.2 102 41.2
CsaV3_3G005050 Cucumis sativus L. HOM05D003074 ORTHO05D002434 1.5e-08 63.2 59 52.5
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 1.5e-08 63.2 94 43.6
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 1.9e-08 62.8 101 35.6
TPR.G34803 Trifolium pratense HOM05D003074 ORTHO05D002434 1.9e-08 62.8 49 63.3
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 2.5e-08 62.4 89 43.8
AUR62020444 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.3e-08 62.0 102 41.2
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 3.3e-08 62.0 85 38.8
ClCG10G005340 Citrullus lanatus HOM05D003074 ORTHO05D002434 4.3e-08 61.6 93 39.8
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 7.4e-08 60.8 102 41.2
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 7.4e-08 60.8 113 38.1
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 1.3e-07 60.1 100 36.0
CDE02G3016 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.3e-07 60.1 56 51.8
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.3e-07 60.1 109 33.9
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.3e-07 60.1 112 39.3
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 1.3e-07 60.1 116 35.3
Potri.011G139400 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.3e-07 60.1 56 55.4
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.7e-07 59.7 111 40.5
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 1.7e-07 59.7 109 37.6
Sabra11G0125400 Salix brachista HOM05D003074 ORTHO05D002434 2.2e-07 59.3 57 57.9
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 2.8e-07 58.9 62 51.6
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 2.8e-07 58.9 102 37.3
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.8e-07 58.9 111 36.0
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 2.8e-07 58.9 126 36.5
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.8e-07 58.9 103 36.9
Medtr5g092710 Medicago truncatula HOM05D003074 ORTHO05D002434 2.8e-07 58.9 56 46.4
Sed0005061 Sechium edule HOM05D003074 ORTHO05D002434 2.8e-07 58.9 84 39.3
Aqoxy1G02177 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 3.7e-07 58.5 97 30.9
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 3.7e-07 58.5 60 53.3
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 4.8e-07 58.2 125 36.8
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 4.8e-07 58.2 107 32.7
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.8e-07 58.2 124 37.1
Sabra11G0125300 Salix brachista HOM05D003074 ORTHO05D002434 4.8e-07 58.2 100 43.0
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 4.8e-07 58.2 122 35.2
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.3e-07 57.8 124 37.1
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.3e-07 57.8 124 37.1
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 8.2e-07 57.4 112 37.5
Lalb_Chr04g0248431 Lupinus albus HOM05D003074 ORTHO05D002434 1.1e-06 57.0 56 51.8
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.1e-06 57.0 123 38.2
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 1.8e-06 56.2 90 41.1
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.8e-06 56.2 114 36.8
Glyma.02G290900 Glycine max HOM05D003074 ORTHO05D002434 1.8e-06 56.2 64 56.2
Duzib160G0150 Durio zibethinus HOM05D003074 ORTHO05D002434 3.1e-06 55.5 103 35.9
Eucgr.E04060 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.1e-06 55.5 115 35.7
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 3.1e-06 55.5 103 36.9
Gohir.D10G012900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.1e-06 55.5 103 35.0
Gorai.011G014600 Gossypium raimondii HOM05D003074 ORTHO05D002434 3.1e-06 55.5 103 35.0
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 3.1e-06 55.5 118 37.3
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 3.1e-06 55.5 115 36.5
AUR62021958 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.1e-06 55.1 115 35.7
Glyma.07G259800 Glycine max HOM05D008677 ORTHO05D002434 4.1e-06 55.1 121 33.9
Nitab4.5_0000653g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 4.1e-06 55.1 84 45.2
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 4.1e-06 55.1 116 35.3
arahy.Tifrunner.gnm1.ann1.8P9XRD Arachis hypogaea HOM05D008677 ORTHO05D002434 5.3e-06 54.7 124 35.5
AUR62012700 Chenopodium quinoa HOM05D003074 ORTHO05D002434 5.3e-06 54.7 113 35.4
AUR62020443 Chenopodium quinoa HOM05D003074 ORTHO05D002434 5.3e-06 54.7 104 37.5
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 5.3e-06 54.7 102 37.3
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 5.3e-06 54.7 105 38.1
AUR62015773 Chenopodium quinoa HOM05D003074 ORTHO05D002434 6.9e-06 54.3 86 40.7
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.9e-06 54.3 125 36.0
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 9.1e-06 53.9 121 36.4


User provided reference genes

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