Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 1.1e-99 366.7 192 100.0
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 2.2e-60 236.1 172 72.1
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.1e-59 233.8 173 71.7
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.4e-59 233.4 159 75.5
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 4.6e-58 228.4 154 74.0
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 1.4e-57 226.9 167 70.1
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 1.8e-57 226.5 158 71.5
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 3.0e-57 225.7 160 73.1
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 3.0e-57 225.7 155 73.5
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 3.9e-57 225.3 151 73.5
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 1.1e-56 223.8 154 72.1
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 1.9e-56 223.0 178 66.3
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 5.7e-56 221.5 156 70.5
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 7.4e-56 221.1 162 69.1
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 7.4e-56 221.1 158 71.5
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 9.7e-56 220.7 160 69.4
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 1.3e-55 220.3 149 76.5
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 1.3e-55 220.3 149 74.5
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 1.7e-55 219.9 161 72.0
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 2.2e-55 219.5 158 71.5
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 2.8e-55 219.2 155 69.7
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 2.8e-55 219.2 155 71.6
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 2.8e-55 219.2 155 71.0
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 3.7e-55 218.8 154 72.1
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 3.7e-55 218.8 151 73.5
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 4.8e-55 218.4 160 70.6
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 6.3e-55 218.0 151 72.8
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 8.2e-55 217.6 159 69.2
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 8.2e-55 217.6 160 66.9
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 8.2e-55 217.6 161 71.4
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 8.2e-55 217.6 156 69.9
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 8.2e-55 217.6 152 71.1
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 1.1e-54 217.2 161 65.8
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 1.1e-54 217.2 155 71.0
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.4e-54 216.9 155 70.3
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 1.4e-54 216.9 155 72.9
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 1.8e-54 216.5 149 73.8
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 1.8e-54 216.5 155 69.7
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 2.4e-54 216.1 155 70.3
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 2.4e-54 216.1 161 65.2
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 2.4e-54 216.1 152 71.7
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 3.1e-54 215.7 152 71.7
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 3.1e-54 215.7 158 69.6
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 4.1e-54 215.3 156 67.9
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 4.1e-54 215.3 156 67.9
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 5.3e-54 214.9 157 70.7
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 5.3e-54 214.9 155 71.0
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 6.9e-54 214.5 153 69.3
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 1.2e-53 213.8 158 67.1
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 1.2e-53 213.8 156 67.3
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 1.2e-53 213.8 161 70.2
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.5e-53 213.4 156 69.2
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.5e-53 213.4 155 69.7
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 1.5e-53 213.4 154 69.5
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 1.5e-53 213.4 155 69.0
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 2.0e-53 213.0 161 66.5
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 2.0e-53 213.0 155 70.3
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.6e-53 212.6 167 67.7
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 2.6e-53 212.6 162 64.8
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 4.5e-53 211.8 154 70.1
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 5.9e-53 211.5 160 67.5
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 5.9e-53 211.5 161 64.0
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 1.0e-52 210.7 161 68.3
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 1.0e-52 210.7 183 61.7
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 1.7e-52 209.9 173 63.6
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.7e-52 209.9 155 68.4
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 1.7e-52 209.9 155 68.4
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 1.7e-52 209.9 155 69.0
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 2.2e-52 209.5 161 64.0
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 2.2e-52 209.5 152 70.4
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 2.9e-52 209.1 156 66.7
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 3.8e-52 208.8 173 62.4
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 3.8e-52 208.8 161 69.6
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 3.8e-52 208.8 156 68.6
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 5.0e-52 208.4 159 67.9
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 5.0e-52 208.4 156 69.2
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 6.5e-52 208.0 173 62.4
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 8.5e-52 207.6 167 64.1
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 8.5e-52 207.6 156 67.9
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 8.5e-52 207.6 148 69.6
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 8.5e-52 207.6 156 69.9
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 1.1e-51 207.2 154 68.2
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 1.9e-51 206.5 171 64.3
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 3.2e-51 205.7 164 65.9
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 4.2e-51 205.3 164 66.5
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 5.5e-51 204.9 159 63.5
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 5.5e-51 204.9 173 62.4
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 9.4e-51 204.1 148 68.9
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 1.2e-50 203.8 173 61.8
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.6e-50 203.4 149 67.8
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 1.8e-49 199.9 170 61.8
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 2.3e-49 199.5 155 64.5
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 1.1e-48 197.2 154 64.9
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 2.0e-48 196.4 186 57.0
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 5.7e-48 194.9 154 65.6
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 9.7e-48 194.1 149 67.1
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 2.2e-47 193.0 154 63.6
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 8.2e-47 191.0 163 63.2
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 8.2e-47 191.0 154 63.0
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 1.4e-46 190.3 155 64.5
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 3.1e-46 189.1 153 63.4
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 4.1e-46 188.7 154 63.6
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 4.1e-46 188.7 153 64.1
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 4.1e-46 188.7 160 61.2
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 4.1e-46 188.7 171 59.6
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 5.3e-46 188.3 154 63.0
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 5.3e-46 188.3 160 63.8
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 9.1e-46 187.6 154 62.3
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 9.1e-46 187.6 149 64.4
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 1.2e-45 187.2 151 62.9
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 3.4e-45 185.7 154 63.0
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.2e-44 183.0 189 56.6
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 5.0e-44 181.8 149 60.4
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 4.2e-43 178.7 201 53.7
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 1.2e-42 177.2 149 61.1
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.1e-42 176.4 134 65.7
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 2.7e-42 176.0 119 71.4
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 3.6e-42 175.6 171 58.5
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 4.7e-42 175.3 154 61.0
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 3.9e-41 172.2 149 57.0
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 8.8e-41 171.0 155 59.4
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.7e-39 166.8 155 60.6
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 2.2e-39 166.4 189 49.2
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 8.2e-39 164.5 132 61.4
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 2.4e-38 162.9 130 61.5
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 1.6e-37 160.2 118 66.1
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 3.5e-37 159.1 161 53.4
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 2.5e-35 152.9 113 69.9
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 4.2e-35 152.1 114 70.2
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 5.5e-35 151.8 126 63.5
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 6.1e-34 148.3 163 54.6
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 1.8e-33 146.7 170 49.4
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 1.8e-33 146.7 121 57.0
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 1.8e-33 146.7 102 73.5
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.6e-32 142.9 98 70.4
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 1.4e-30 137.1 114 63.2
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 1.2e-29 134.0 109 64.2
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 2.0e-29 133.3 158 48.1
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 6.5e-28 128.3 106 63.2
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 6.1e-26 121.7 91 70.3
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 2.2e-23 113.2 91 67.0
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 4.8e-23 112.1 151 45.0
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 1.4e-22 110.5 159 42.1
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 6.6e-20 101.7 170 35.3
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 1.2e-18 97.4 66 69.7
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.7e-18 95.5 67 67.2
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 1.0e-17 94.4 89 58.4
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 4.1e-14 82.4 59 66.1
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 4.1e-14 82.4 59 66.1
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 9.2e-14 81.3 48 75.0
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 5.9e-13 78.6 114 46.5
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 3.8e-12 75.9 48 70.8
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 6.6e-12 75.1 163 33.1
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 3.3e-11 72.8 70 60.0
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 7.3e-11 71.6 54 70.4
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 9.5e-11 71.2 195 27.2
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 1.2e-10 70.9 151 31.8
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 1.2e-08 64.3 45 66.7


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