Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0442 Trochodendron aralioides HOM05D004642 ORTHO05D005466 7.7e-75 283.9 158 100.0
TAR626G0806 Trochodendron aralioides HOM05D004642 ORTHO05D005466 4.5e-35 151.8 115 74.8
Prupe.3G071700 Prunus persica HOM05D004642 ORTHO05D005466 7.3e-33 144.4 115 68.7
Dinv30514 Davidia involucrata HOM05D004642 ORTHO05D005466 9.5e-33 144.1 115 71.3
Dinv38051 Davidia involucrata HOM05D004642 ORTHO05D005466 2.1e-32 142.9 115 70.4
Atru.chr1.3266 Acer truncatum HOM05D004642 ORTHO05D005466 2.8e-32 142.5 115 69.6
Haze_16437 Corylus avellana HOM05D004642 ORTHO05D005466 1.4e-31 140.2 114 69.3
Cfa002061 Carpinus fangiana HOM05D004642 ORTHO05D005466 6.8e-31 137.9 114 68.4
PGR102G3321 Punica granatum HOM05D004642 ORTHO05D005466 5.7e-30 134.8 116 65.5
Gohir.D05G129000 Gossypium hirsutum HOM05D004642 ORTHO05D005466 1.4e-28 130.2 116 61.2
Gorai.009G133100 Gossypium raimondii HOM05D004642 ORTHO05D005466 1.4e-28 130.2 116 61.2
Ciclev10025273m.g Citrus clementina HOM05D004642 ORTHO05D005466 5.4e-28 128.3 115 62.6
Lj3g0008789 Lotus japonicus HOM05D004642 ORTHO05D005466 5.4e-28 128.3 116 62.9
Gohir.A05G129515 Gossypium hirsutum HOM05D004642 ORTHO05D005466 1.2e-27 127.1 114 61.4
Actinidia24760 Actinidia chinensis HOM05D004642 ORTHO05D005466 3.5e-27 125.6 115 65.2
Aqoxy7G01787 Aquilegia oxysepala HOM05D004642 ORTHO05D005466 5.9e-27 124.8 115 61.7
CSS0030593 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 5.9e-27 124.8 116 63.8
Potri.001G179600 Populus trichocarpa HOM05D004642 ORTHO05D005466 6.6e-26 121.3 116 61.2
Aa31LG8G3170 Aethionema arabicum HOM05D004642 ORTHO05D005466 8.6e-26 120.9 115 60.9
PSO782G0786 Papaver somniferum HOM05D004642 ORTHO05D005466 1.1e-25 120.6 115 60.0
vmacro16950 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 2.5e-25 119.4 105 63.8
CiPaw.02G151400 Carya illinoinensis HOM05D004642 ORTHO05D005466 7.3e-25 117.9 104 64.4
TAR636G0382 Trochodendron aralioides HOM05D004642 ORTHO05D005466 1.2e-24 117.1 115 61.7
Gorai.006G098800 Gossypium raimondii HOM05D004642 ORTHO05D005466 1.6e-24 116.7 116 55.2
Cc04_g03480 Coffea canephora HOM05D004642 ORTHO05D005466 2.8e-24 115.9 115 56.5
Hma1.2p1_0323F.1_g125210 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 4.7e-24 115.2 116 57.8
BcaC01g03843 Brassica carinata HOM05D004642 ORTHO05D005466 8.9e-23 110.9 115 55.7
C03p48030 Brassica napus HOM05D004642 ORTHO05D005466 8.9e-23 110.9 115 55.7
BolC3t17082H Brassica oleracea HOM05D004642 ORTHO05D005466 8.9e-23 110.9 115 55.7
Gohir.A09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 8.9e-23 110.9 116 52.6
Glyma.12G087100 Glycine max HOM05D004642 ORTHO05D005466 1.2e-22 110.5 120 55.0
Oeu033484.1 Olea europaea HOM05D004642 ORTHO05D005466 2.6e-22 109.4 115 53.9
QL05p024308 Quercus lobata HOM05D004642 ORTHO05D005466 2.6e-22 109.4 115 57.4
BcaB04g18872 Brassica carinata HOM05D004642 ORTHO05D005466 4.4e-22 108.6 113 53.1
BraA03t13110Z Brassica rapa HOM05D004642 ORTHO05D005466 7.5e-22 107.8 115 53.9
Gohir.D09G083200 Gossypium hirsutum HOM05D004642 ORTHO05D005466 7.5e-22 107.8 116 53.4
A03p39630 Brassica napus HOM05D004642 ORTHO05D005466 9.8e-22 107.5 115 53.9
ClCG09G002170 Citrullus lanatus HOM05D004642 ORTHO05D005466 2.2e-21 106.3 114 54.4
vmacro18915 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 2.2e-21 106.3 113 58.4
CsaV3_7G033140 Cucumis sativus L. HOM05D004642 ORTHO05D005466 8.3e-21 104.4 114 52.6
Thhalv10020153m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 8.3e-21 104.4 115 53.0
MD09G1212900 Malus domestica HOM05D004642 ORTHO05D005466 2.4e-20 102.8 112 54.5
MELO3C024228.2 Cucumis melo HOM05D004642 ORTHO05D005466 3.2e-20 102.4 114 51.8
PGSC0003DMG400002564 Solanum tuberosum HOM05D004642 ORTHO05D005466 3.2e-20 102.4 115 52.2
SalBow2G0306 Salvia bowleyana HOM05D004642 ORTHO05D005466 5.4e-20 101.7 115 49.6
BcaC09g48580 Brassica carinata HOM05D004642 ORTHO05D005466 7.0e-20 101.3 112 53.6
BolC1t04795H Brassica oleracea HOM05D004642 ORTHO05D005466 7.0e-20 101.3 112 53.6
Lalb_Chr14g0373421 Lupinus albus HOM05D004642 ORTHO05D005466 1.2e-19 100.5 115 53.0
Nitab4.5_0000671g0060 Nicotiana tabacum HOM05D004642 ORTHO05D005466 1.6e-19 100.1 115 53.0
Eucgr.F03012 Eucalyptus grandis HOM05D004642 ORTHO05D005466 2.0e-19 99.8 90 62.2
C01p48370 Brassica napus HOM05D004642 ORTHO05D005466 3.5e-19 99.0 115 52.2
Lalb_Chr04g0262651 Lupinus albus HOM05D004642 ORTHO05D005466 3.5e-19 99.0 115 47.8
TWI75G1656 Tripterygium wilfordii HOM05D004642 ORTHO05D005466 3.5e-19 99.0 101 54.5
MD17G1195700 Malus domestica HOM05D004642 ORTHO05D005466 6.0e-19 98.2 116 52.6
Sed0016127 Sechium edule HOM05D004642 ORTHO05D005466 6.0e-19 98.2 116 51.7
Lalb_Chr01g0012651 Lupinus albus HOM05D004642 ORTHO05D005466 1.0e-18 97.4 109 52.3
MD09G1213500 Malus domestica HOM05D004642 ORTHO05D005466 6.6e-18 94.7 116 51.7
SGA_v2.0_scaffold4G01996 Striga asiatica HOM05D004642 ORTHO05D005466 6.6e-18 94.7 116 49.1
AUR62016441 Chenopodium quinoa HOM05D004642 ORTHO05D005466 8.6e-18 94.4 105 54.3
Hund00614 Selenicereus undatus HOM05D004642 ORTHO05D005466 8.6e-18 94.4 108 51.9
BcaB06g25698 Brassica carinata HOM05D004642 ORTHO05D005466 1.1e-17 94.0 101 54.5
Duzib192G0922 Durio zibethinus HOM05D004642 ORTHO05D005466 1.1e-17 94.0 93 55.9
Rhsim08G0221000 Rhododendron simsii HOM05D004642 ORTHO05D005466 1.1e-17 94.0 114 52.6
Sopen03g039110 Solanum pennellii HOM05D004642 ORTHO05D005466 1.1e-17 94.0 115 48.7
Duzib235G0715 Durio zibethinus HOM05D004642 ORTHO05D005466 7.3e-17 91.3 80 63.8
Thecc.06G086400 Theobroma cacao HOM05D004642 ORTHO05D005466 7.3e-17 91.3 83 60.2
unitig_578.g16688 Utricularia gibba HOM05D004642 ORTHO05D005466 1.2e-16 90.5 116 45.7
Medtr4g054960 Medicago truncatula HOM05D004642 ORTHO05D005466 1.6e-16 90.1 115 51.3
Zm00001eb283760 Zea mays HOM05D004642 ORTHO05D005466 2.1e-16 89.7 120 42.5
Nitab4.5_0005851g0030 Nicotiana tabacum HOM05D004642 ORTHO05D005466 3.6e-16 89.0 115 48.7
AUR62011627 Chenopodium quinoa HOM05D004642 ORTHO05D005466 4.7e-16 88.6 103 51.5
Ca_19383_v3 Cicer arietinum L. HOM05D004642 ORTHO05D005466 6.2e-16 88.2 90 53.3
arahy.Tifrunner.gnm1.ann1.D5EQ93 Arachis hypogaea HOM05D004642 ORTHO05D005466 8.1e-16 87.8 90 55.6
A05p33450 Brassica napus HOM05D004642 ORTHO05D005466 1.8e-15 86.7 94 51.1
Migut.D01034 Erythranthe guttata HOM05D004642 ORTHO05D005466 8.9e-15 84.3 92 54.3
CARHR091130 Cardamine hirsuta HOM05D004642 ORTHO05D005466 1.2e-14 84.0 115 44.3
EL10Ac9g21996 Beta vulgaris HOM05D004642 ORTHO05D005466 1.5e-14 83.6 87 52.9
Zm00001eb122200 Zea mays HOM05D004642 ORTHO05D005466 1.5e-14 83.6 115 41.7
Sabra01G0147200 Salix brachista HOM05D004642 ORTHO05D005466 2.0e-14 83.2 84 57.1
Ah.01g021290 Amaranthus hybridus HOM05D004642 ORTHO05D005466 2.6e-14 82.8 106 48.1
TPR.G15588 Trifolium pratense HOM05D004642 ORTHO05D005466 2.6e-14 82.8 115 45.2
unitig_744.g24335 Utricularia gibba HOM05D004642 ORTHO05D005466 3.4e-14 82.4 117 42.7
arahy.Tifrunner.gnm1.ann1.I53961 Arachis hypogaea HOM05D004642 ORTHO05D005466 5.8e-14 81.6 90 52.2
THA.LOC104817998 Tarenaya hassleriana HOM05D004642 ORTHO05D005466 7.5e-14 81.3 80 57.5
COL.COLO4_30362 Corchorus olitorius HOM05D004642 ORTHO05D005466 9.8e-14 80.9 73 61.6
Solyc03g120230.3 Solanum lycopersicum HOM05D004642 ORTHO05D005466 9.8e-14 80.9 115 44.3
ECA248G0988 Erigeron canadensis HOM05D004642 ORTHO05D005466 2.2e-13 79.7 77 55.8
SalBow2G2616 Salvia bowleyana HOM05D004642 ORTHO05D005466 2.2e-13 79.7 90 50.0
Lsat_1_v5_gn_4_103580 Lactuca sativa HOM05D004642 ORTHO05D005466 3.7e-13 79.0 139 41.7
VMungo1127G1134 Vigna mungo HOM05D004642 ORTHO05D005466 4.9e-13 78.6 75 60.0
Sp3g14350 Schrenkiella parvula HOM05D004642 ORTHO05D005466 1.4e-12 77.0 75 53.3
BcaB04g20887 Brassica carinata HOM05D004642 ORTHO05D005466 2.4e-12 76.3 80 51.2
CDE06G0246 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 5.4e-12 75.1 115 43.5
CDE07G1358 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 5.4e-12 75.1 115 44.3
HPP92_019980 Vanilla planifolia HOM05D004642 ORTHO05D005466 9.2e-12 74.3 112 38.4
FvH4_6g31081 Fragaria vesca HOM05D004642 ORTHO05D005466 1.2e-11 73.9 84 52.4
FAN09G1651 Fragaria x ananassa HOM05D004642 ORTHO05D005466 1.6e-11 73.6 112 44.6
FAN02G1410 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.1e-11 73.2 123 43.9
BraA05t22169Z Brassica rapa HOM05D004642 ORTHO05D005466 2.7e-11 72.8 83 48.2
FAN14G2337 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.7e-11 72.8 85 51.8
Lj5A61G44 Lonicera japonica HOM05D004642 ORTHO05D005466 3.5e-11 72.4 66 57.6
GSVIVG01017115001 Vitis vinifera HOM05D004642 ORTHO05D005466 6.0e-11 71.6 58 67.2
Thhalv10023042m.g Eutrema salsugineum HOM05D004642 ORTHO05D005466 7.8e-11 71.2 124 38.7
Peaxi162Scf00015g00335 Petunia axillaris HOM05D004642 ORTHO05D005466 7.8e-11 71.2 63 63.5
arahy.Tifrunner.gnm1.ann1.CA04QB Arachis hypogaea HOM05D004642 ORTHO05D005466 1.0e-10 70.9 84 48.8
arahy.Tifrunner.gnm1.ann1.Z6VQ0W Arachis hypogaea HOM05D004642 ORTHO05D005466 1.0e-10 70.9 84 48.8
C05p50450 Brassica napus HOM05D004642 ORTHO05D005466 1.7e-10 70.1 81 48.1
Nn8g39228 Nelumbo nucifera HOM05D004642 ORTHO05D005466 3.0e-10 69.3 58 69.0
BolC5t33791H Brassica oleracea HOM05D004642 ORTHO05D005466 3.9e-10 68.9 81 46.9
Hma1.2p1_0323F.1_g125200 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 3.9e-10 68.9 61 62.3
Psat7g189080 Pisum sativum HOM05D004642 ORTHO05D005466 3.9e-10 68.9 65 56.9
HanXRQChr09g0275271 Helianthus annuus HOM05D004642 ORTHO05D005466 6.6e-10 68.2 68 55.9
HPP92_020045 Vanilla planifolia HOM05D004642 ORTHO05D005466 2.5e-09 66.2 104 38.5
FAN05G5776 Fragaria x ananassa HOM05D004642 ORTHO05D005466 5.6e-09 65.1 101 44.6
PSO063G4770 Papaver somniferum HOM05D004642 ORTHO05D005466 5.6e-09 65.1 115 38.3
Phvul.011G092000 Phaseolus vulgaris HOM05D004642 ORTHO05D005466 1.6e-08 63.5 66 56.1
ATR0037G055 Amborella trichopoda HOM05D004642 ORTHO05D005466 5.2e-07 58.5 90 36.7
Nn2g11790 Nelumbo nucifera HOM05D004642 ORTHO05D005466 2.6e-06 56.2 90 43.3
Actinidia08974 Actinidia chinensis HOM05D004642 ORTHO05D005466 5.8e-06 55.1 114 38.6


User provided reference genes

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