Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0440 Trochodendron aralioides HOM05D003773 ORTHO05D004377 3.2e-72 276.2 314 100.0
Nn7g36520 Nelumbo nucifera HOM05D003773 ORTHO05D004377 1.0e-62 244.6 314 68.8
TAR626G0538 Trochodendron aralioides HOM05D003773 ORTHO05D004377 3.0e-62 243.0 314 75.5
CiPaw.02G104400 Carya illinoinensis HOM05D003773 ORTHO05D004377 1.3e-60 237.7 314 70.1
Hma1.2p1_1650F.1_g295665 Hydrangea macrophylla HOM05D003773 ORTHO05D004377 6.2e-60 235.3 314 92.7
GSVIVG01019372001 Vitis vinifera HOM05D003773 ORTHO05D004377 1.1e-59 234.6 314 66.2
Hma1.2p1_1872F.1_g306150 Hydrangea macrophylla HOM05D003773 ORTHO05D004377 1.4e-59 234.2 314 92.4
Lj3C848T13 Lonicera japonica HOM05D003773 ORTHO05D004377 9.0e-59 231.5 314 42.0
Cfa004598 Carpinus fangiana HOM05D003773 ORTHO05D004377 1.2e-58 231.1 314 69.1
Eucgr.G02437 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.2e-58 231.1 313 90.7
GSVIVG01000415001 Vitis vinifera HOM05D003773 ORTHO05D004377 1.5e-58 230.7 314 65.9
Ca_17973_v3 Cicer arietinum L. HOM05D003773 ORTHO05D004377 2.0e-58 230.3 314 68.8
MSTRG.22069 Avicennia marina HOM05D003773 ORTHO05D004377 3.4e-58 229.6 314 64.6
QL05p004180 Quercus lobata HOM05D003773 ORTHO05D004377 3.4e-58 229.6 313 75.1
Aqoxy5G00933 Aquilegia oxysepala HOM05D003773 ORTHO05D004377 9.9e-58 228.0 312 81.4
Glyma.08G111200 Glycine max HOM05D003773 ORTHO05D004377 1.3e-57 227.6 311 73.6
Cc04_g06080 Coffea canephora HOM05D003773 ORTHO05D004377 2.2e-57 226.9 314 65.0
CsaV3_7G032670 Cucumis sativus L. HOM05D003773 ORTHO05D004377 2.2e-57 226.9 313 68.1
Lalb_Chr07g0186751 Lupinus albus HOM05D003773 ORTHO05D004377 2.2e-57 226.9 314 71.0
arahy.Tifrunner.gnm1.ann1.E2NQKT Arachis hypogaea HOM05D003773 ORTHO05D004377 2.9e-57 226.5 314 74.8
Psat7g074520 Pisum sativum HOM05D003773 ORTHO05D004377 3.8e-57 226.1 314 74.2
Actinidia31174 Actinidia chinensis HOM05D003773 ORTHO05D004377 4.9e-57 225.7 314 72.6
MSTRG.21385 Avicennia marina HOM05D003773 ORTHO05D004377 4.9e-57 225.7 314 65.0
Eucgr.G02268 Eucalyptus grandis HOM05D003773 ORTHO05D004377 6.4e-57 225.3 324 53.4
Lj4g0017678 Lotus japonicus HOM05D003773 ORTHO05D004377 8.4e-57 224.9 314 74.2
MELO3C023397.2 Cucumis melo HOM05D003773 ORTHO05D004377 1.1e-56 224.6 313 67.4
Lj4g0004931 Lotus japonicus HOM05D003773 ORTHO05D004377 3.2e-56 223.0 314 74.2
Manes.04G060700 Manihot esculenta HOM05D003773 ORTHO05D004377 3.2e-56 223.0 315 65.1
Ciclev10015999m.g Citrus clementina HOM05D003773 ORTHO05D004377 7.1e-56 221.9 313 70.3
CDE02G2566 Ceratophyllum demersum HOM05D003773 ORTHO05D004377 9.3e-56 221.5 311 89.7
AUR62035657 Chenopodium quinoa HOM05D003773 ORTHO05D004377 2.1e-55 220.3 312 51.9
Eucgr.K00882 Eucalyptus grandis HOM05D003773 ORTHO05D004377 2.1e-55 220.3 313 69.0
Sopen03g037520 Solanum pennellii HOM05D003773 ORTHO05D004377 2.7e-55 219.9 314 72.0
VMungo0251G2733 Vigna mungo HOM05D003773 ORTHO05D004377 2.7e-55 219.9 314 71.3
Nitab4.5_0007004g0040 Nicotiana tabacum HOM05D003773 ORTHO05D004377 3.5e-55 219.5 320 40.0
Solyc03g118570.4 Solanum lycopersicum HOM05D003773 ORTHO05D004377 3.5e-55 219.5 314 72.3
TPR.G11959 Trifolium pratense HOM05D003773 ORTHO05D004377 3.5e-55 219.5 314 66.6
vmacro23351 Vaccinium macrocarpon HOM05D003773 ORTHO05D004377 3.5e-55 219.5 331 40.5
Migut.A01113 Erythranthe guttata HOM05D003773 ORTHO05D004377 4.6e-55 219.2 314 70.7
MBI02_g12519_MAGBIO Magnolia biondii HOM05D003773 ORTHO05D004377 4.6e-55 219.2 317 63.1
Sopen12g020600 Solanum pennellii HOM05D003773 ORTHO05D004377 1.0e-54 218.0 309 73.8
THA.LOC104799137 Tarenaya hassleriana HOM05D003773 ORTHO05D004377 1.0e-54 218.0 315 64.8
Gorai.005G208400 Gossypium raimondii HOM05D003773 ORTHO05D004377 2.3e-54 216.9 311 66.9
Solyc12g040810.2 Solanum lycopersicum HOM05D003773 ORTHO05D004377 5.1e-54 215.7 309 73.5
ECA233G0965 Erigeron canadensis HOM05D003773 ORTHO05D004377 1.5e-53 214.2 310 88.1
AUR62017150 Chenopodium quinoa HOM05D003773 ORTHO05D004377 2.5e-53 213.4 309 53.4
EL10Ac9g21128 Beta vulgaris HOM05D003773 ORTHO05D004377 3.3e-53 213.0 312 74.0
Gohir.D02G186100 Gossypium hirsutum HOM05D003773 ORTHO05D004377 5.6e-53 212.2 311 65.9
Phvul.002G235200 Phaseolus vulgaris HOM05D003773 ORTHO05D004377 5.6e-53 212.2 314 71.0
PSO017G1854 Papaver somniferum HOM05D003773 ORTHO05D004377 7.4e-53 211.8 313 88.8
Aa31LG3G15020 Aethionema arabicum HOM05D003773 ORTHO05D004377 1.6e-52 210.7 311 64.3
PSO339G0310 Papaver somniferum HOM05D003773 ORTHO05D004377 1.6e-52 210.7 313 88.8
CAN.G843.44 Capsicum annuum HOM05D003773 ORTHO05D004377 2.1e-52 210.3 341 51.3
Thhalv10014116m.g Eutrema salsugineum HOM05D003773 ORTHO05D004377 2.1e-52 210.3 314 63.7
Hund25164 Selenicereus undatus HOM05D003773 ORTHO05D004377 3.1e-51 206.5 307 52.4
DCAR_023465 Daucus carota HOM05D003773 ORTHO05D004377 4.0e-51 206.1 310 39.4
C09p64680 Brassica napus HOM05D003773 ORTHO05D004377 9.0e-51 204.9 314 62.7
Atru.chr7.1713 Acer truncatum HOM05D003773 ORTHO05D004377 1.2e-50 204.5 314 49.4
RcHm_v2.0_Chr2g0160601 Rosa chinensis HOM05D003773 ORTHO05D004377 1.5e-50 204.1 312 70.2
Duzib052G0913 Durio zibethinus HOM05D003773 ORTHO05D004377 2.0e-50 203.8 314 64.3
BcaNung06880 Brassica carinata HOM05D003773 ORTHO05D004377 2.6e-50 203.4 309 62.8
Sc07g0000800 Simmondsia chinensis HOM05D003773 ORTHO05D004377 2.6e-50 203.4 314 63.1
Carub.0006s1071 Capsella rubella HOM05D003773 ORTHO05D004377 3.4e-50 203.0 314 62.7
FvH4_7g02690 Fragaria vesca HOM05D003773 ORTHO05D004377 7.6e-50 201.8 312 72.1
RhsimUnG0210700 Rhododendron simsii HOM05D003773 ORTHO05D004377 7.6e-50 201.8 312 88.8
FvH4_6g43850 Fragaria vesca HOM05D003773 ORTHO05D004377 9.9e-50 201.4 312 71.2
Thhalv10021168m.g Eutrema salsugineum HOM05D003773 ORTHO05D004377 1.7e-49 200.7 312 62.5
FAN03G1906 Fragaria x ananassa HOM05D003773 ORTHO05D004377 3.8e-49 199.5 312 59.3
BcaB01g05426 Brassica carinata HOM05D003773 ORTHO05D004377 4.9e-49 199.1 314 61.8
FAN10G4129 Fragaria x ananassa HOM05D003773 ORTHO05D004377 4.9e-49 199.1 312 71.5
Peaxi162Scf00571g00532 Petunia axillaris HOM05D003773 ORTHO05D004377 4.9e-49 199.1 296 48.6
FAN14G4120 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.1e-48 198.0 312 70.8
Sp3g10300 Schrenkiella parvula HOM05D003773 ORTHO05D004377 1.4e-48 197.6 311 62.7
Sed0008204 Sechium edule HOM05D003773 ORTHO05D004377 1.4e-48 197.6 296 66.2
Cfa014475 Carpinus fangiana HOM05D003773 ORTHO05D004377 1.9e-48 197.2 287 76.7
FAN05G4396 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.9e-48 197.2 312 86.2
vmacro03401 Vaccinium macrocarpon HOM05D003773 ORTHO05D004377 1.9e-48 197.2 364 36.0
FAN06G3388 Fragaria x ananassa HOM05D003773 ORTHO05D004377 7.1e-48 195.3 308 72.1
Potri.013G012500 Populus trichocarpa HOM05D003773 ORTHO05D004377 9.3e-48 194.9 314 65.3
BolC9t59300H Brassica oleracea HOM05D003773 ORTHO05D004377 1.2e-47 194.5 316 62.3
Zm00001eb035310 Zea mays HOM05D003773 ORTHO05D004377 1.6e-47 194.1 313 77.3
SGA_v2.0_scaffold220G42596 Striga asiatica HOM05D003773 ORTHO05D004377 2.1e-47 193.7 322 52.8
Os08g0512300 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 2.7e-47 193.4 310 78.1
TWI39G0383 Tripterygium wilfordii HOM05D003773 ORTHO05D004377 3.5e-47 193.0 314 61.5
HPP92_004888 Vanilla planifolia HOM05D003773 ORTHO05D004377 7.9e-47 191.8 312 60.9
Thecc.10G119200 Theobroma cacao HOM05D003773 ORTHO05D004377 1.0e-46 191.4 311 63.7
Dinv09299 Davidia involucrata HOM05D003773 ORTHO05D004377 2.5e-45 186.8 284 69.0
SEGI_14663 Sequoiadendron giganteum HOM05D003773 ORTHO05D004377 2.5e-45 186.8 313 66.5
PGR142G1397 Punica granatum HOM05D003773 ORTHO05D004377 3.3e-45 186.4 314 60.8
Eucgr.G01411 Eucalyptus grandis HOM05D003773 ORTHO05D004377 9.6e-45 184.9 322 36.6
AagrBONN_evm.TU.Sc2ySwM_117.1003 Anthoceros agrestis HOM05D003773 ORTHO05D004377 1.3e-44 184.5 310 79.0
SHI10290 Sapria himalayana HOM05D003773 ORTHO05D004377 1.6e-44 184.1 309 36.9
COL.COLO4_03532 Corchorus olitorius HOM05D003773 ORTHO05D004377 6.2e-44 182.2 314 36.0
CSS0007239 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 1.4e-43 181.0 284 90.8
Eucgr.G01407 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.8e-43 180.6 313 84.7
Mapoly0074s0013 Marchantia polymorpha HOM05D003773 ORTHO05D004377 2.4e-43 180.3 311 66.2
Lsat_1_v5_gn_6_29461 Lactuca sativa HOM05D003773 ORTHO05D004377 4.0e-43 179.5 310 54.2
CSS0038312 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 5.3e-43 179.1 284 74.3
Pp3c1_39910 Physcomitrium patens HOM05D003773 ORTHO05D004377 6.9e-43 178.7 312 63.8
RcHm_v2.0_Chr5g0048191 Rosa chinensis HOM05D003773 ORTHO05D004377 6.9e-43 178.7 285 74.4
Nitab4.5_0001264g0100 Nicotiana tabacum HOM05D003773 ORTHO05D004377 1.2e-42 177.9 287 49.1
CANSAT11G0557 Cannabis sativa HOM05D003773 ORTHO05D004377 1.5e-42 177.6 314 66.9
FAN09G4222 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.5e-42 177.6 347 34.3
ClCG02G001540 Citrullus lanatus HOM05D003773 ORTHO05D004377 2.0e-42 177.2 288 38.2
Cpa.g.sc50.7 Carica papaya HOM05D003773 ORTHO05D004377 3.4e-42 176.4 314 59.6
BcaB01g05423 Brassica carinata HOM05D003773 ORTHO05D004377 5.8e-42 175.6 314 35.7
HanXRQChr02g0051831 Helianthus annuus HOM05D003773 ORTHO05D004377 5.8e-42 175.6 282 90.8
MD14G1230700 Malus domestica HOM05D003773 ORTHO05D004377 7.6e-42 175.3 306 35.9
SMO340G0057 Selaginella moellendorffii HOM05D003773 ORTHO05D004377 7.6e-42 175.3 308 82.8
Nitab4.5_0002046g0050 Nicotiana tabacum HOM05D003773 ORTHO05D004377 1.3e-41 174.5 281 49.5
Ah.12g059510 Amaranthus hybridus HOM05D003773 ORTHO05D004377 1.7e-41 174.1 321 35.2
AT5G12210 Arabidopsis thaliana HOM05D003773 ORTHO05D004377 2.9e-41 173.3 314 58.6
BolC3t13141H Brassica oleracea HOM05D003773 ORTHO05D004377 1.1e-40 171.4 315 34.9
RcHm_v2.0_Chr7g0226631 Rosa chinensis HOM05D003773 ORTHO05D004377 1.4e-40 171.0 313 63.6
AL6G23000 Arabidopsis lyrata HOM05D003773 ORTHO05D004377 1.9e-40 170.6 314 59.2
HanXRQChr02g0056321 Helianthus annuus HOM05D003773 ORTHO05D004377 1.9e-40 170.6 283 67.5
COL.COLO4_20947 Corchorus olitorius HOM05D003773 ORTHO05D004377 1.6e-39 167.5 314 34.4
SGA_v2.0_scaffold227G43195 Striga asiatica HOM05D003773 ORTHO05D004377 2.1e-39 167.2 92 80.4
Haze_12989 Corylus avellana HOM05D003773 ORTHO05D004377 4.6e-39 166.0 92 82.6
QL08p034440 Quercus lobata HOM05D003773 ORTHO05D004377 7.9e-39 165.2 92 80.4
Hund05549 Selenicereus undatus HOM05D003773 ORTHO05D004377 7.9e-39 165.2 303 34.7
CBR_g17690 Chara braunii HOM05D003773 ORTHO05D004377 1.3e-38 164.5 306 69.9
ClCG09G002660 Citrullus lanatus HOM05D003773 ORTHO05D004377 2.3e-38 163.7 410 30.7
Medtr1g111160 Medicago truncatula HOM05D003773 ORTHO05D004377 2.3e-38 163.7 283 72.8
C03p06330 Brassica napus HOM05D003773 ORTHO05D004377 3.9e-38 162.9 316 34.2
MBI02_g15890_MAGBIO Magnolia biondii HOM05D003773 ORTHO05D004377 3.9e-38 162.9 316 34.2
Peaxi162Scf00314g00337 Petunia axillaris HOM05D003773 ORTHO05D004377 5.1e-38 162.5 328 32.3
Sp6g31430 Schrenkiella parvula HOM05D003773 ORTHO05D004377 8.7e-38 161.8 314 57.3
Aqoxy7G03759 Aquilegia oxysepala HOM05D003773 ORTHO05D004377 1.1e-37 161.4 91 81.3
Glyma.05G153500 Glycine max HOM05D003773 ORTHO05D004377 1.9e-37 160.6 91 79.1
CDE05G0639 Ceratophyllum demersum HOM05D003773 ORTHO05D004377 2.5e-37 160.2 92 78.3
RhsimUnG0179500 Rhododendron simsii HOM05D003773 ORTHO05D004377 7.4e-37 158.7 90 80.0
RhsimUnG0179700 Rhododendron simsii HOM05D003773 ORTHO05D004377 7.4e-37 158.7 90 80.0
Eucgr.G01406 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.6e-36 157.5 92 76.1
ATR0723G050 Amborella trichopoda HOM05D003773 ORTHO05D004377 4.8e-36 156.0 91 76.9
Gohir.A03G162800 Gossypium hirsutum HOM05D003773 ORTHO05D004377 4.8e-36 156.0 91 75.8
BcaB01g05420 Brassica carinata HOM05D003773 ORTHO05D004377 6.3e-36 155.6 317 33.1
Prupe.3G223100 Prunus persica HOM05D003773 ORTHO05D004377 2.4e-35 153.7 92 73.9
MD06G1221400 Malus domestica HOM05D003773 ORTHO05D004377 5.9e-34 149.1 289 50.9
CARHR200910 Cardamine hirsuta HOM05D003773 ORTHO05D004377 1.0e-33 148.3 90 74.4
Sabra13G0011200 Salix brachista HOM05D003773 ORTHO05D004377 1.0e-33 148.3 109 63.3
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.0e-33 148.3 268 49.3
A10p25590 Brassica napus HOM05D003773 ORTHO05D004377 9.3e-32 141.7 93 72.0
BraA10t44626Z Brassica rapa HOM05D003773 ORTHO05D004377 9.3e-32 141.7 93 72.0
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 2.1e-31 140.6 92 69.6
Pp3c14_22730 Physcomitrium patens HOM05D003773 ORTHO05D004377 1.8e-30 137.5 311 60.1
AT3G12070 Arabidopsis thaliana HOM05D003773 ORTHO05D004377 7.4e-29 132.1 90 70.0
MD09G1102700 Malus domestica HOM05D003773 ORTHO05D004377 9.7e-29 131.7 75 76.0
Nn7g37010 Nelumbo nucifera HOM05D003773 ORTHO05D004377 2.2e-28 130.6 67 88.1
Prupe.5G225800 Prunus persica HOM05D003773 ORTHO05D004377 3.7e-28 129.8 92 68.5
DCAR_026891 Daucus carota HOM05D003773 ORTHO05D004377 1.8e-27 127.5 65 89.2
PGSC0003DMG400005677 Solanum tuberosum HOM05D003773 ORTHO05D004377 2.4e-27 127.1 66 86.4
unitig_8.g4953 Utricularia gibba HOM05D003773 ORTHO05D004377 2.4e-27 127.1 65 87.7
ECA232G0889 Erigeron canadensis HOM05D003773 ORTHO05D004377 1.2e-26 124.8 64 90.6
Nitab4.5_0010451g0020 Nicotiana tabacum HOM05D003773 ORTHO05D004377 1.2e-26 124.8 68 83.8
QL08p034434 Quercus lobata HOM05D003773 ORTHO05D004377 1.2e-26 124.8 67 86.6
Atru.chr6.919 Acer truncatum HOM05D003773 ORTHO05D004377 2.0e-26 124.0 66 86.4
unitig_8.g4952 Utricularia gibba HOM05D003773 ORTHO05D004377 7.7e-26 122.1 69 75.4
Os11g0523500 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 1.0e-25 121.7 90 58.9
Nn5g31474 Nelumbo nucifera HOM05D003773 ORTHO05D004377 2.2e-25 120.6 69 81.2
CSS0029091 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 3.8e-25 119.8 315 29.8
Oeu015711.3 Olea europaea HOM05D003773 ORTHO05D004377 9.4e-24 115.2 57 91.2
A03p05440 Brassica napus HOM05D003773 ORTHO05D004377 3.6e-23 113.2 66 77.3
CiPaw.03G164900 Carya illinoinensis HOM05D003773 ORTHO05D004377 1.8e-22 110.9 57 89.5
CsaV3_7G003910 Cucumis sativus L. HOM05D003773 ORTHO05D004377 6.7e-22 109.0 69 76.8
Pp3c2_3550 Physcomitrium patens HOM05D003773 ORTHO05D004377 8.2e-20 102.1 67 67.2
AL3G23680 Arabidopsis lyrata HOM05D003773 ORTHO05D004377 1.1e-19 101.7 90 57.8
Cre01.g053500 Chlamydomonas reinhardtii HOM05D003773 ORTHO05D004377 1.1e-19 101.7 92 51.1
PRCOL_00001116 Prasinoderma coloniale HOM05D003773 ORTHO05D004377 5.3e-19 99.4 90 51.1
Prupe.2G111600 Prunus persica HOM05D003773 ORTHO05D004377 9.1e-19 98.6 92 53.3
Haze_26189 Corylus avellana HOM05D003773 ORTHO05D004377 1.1e-16 91.7 91 42.9
SEGI_16055 Sequoiadendron giganteum HOM05D003773 ORTHO05D004377 1.9e-16 90.9 62 67.7
MCO02G125 Micromonas commoda HOM05D003773 ORTHO05D004377 2.5e-16 90.5 85 48.2
Carub.0003s1141 Capsella rubella HOM05D003773 ORTHO05D004377 1.8e-14 84.3 71 59.2
Os03g0193700 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 3.9e-14 83.2 99 40.4
Cfa027002 Carpinus fangiana HOM05D003773 ORTHO05D123979 8.8e-14 82.0 94 43.6
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 3.7e-12 76.6 59 64.4
MELO3C018787.2 Cucumis melo HOM05D003773 ORTHO05D004377 3.1e-11 73.6 75 49.3
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 1.2e-10 71.6 44 72.7
AUR62041265 Chenopodium quinoa HOM05D003773 ORTHO05D004377 1.6e-10 71.2 41 70.7
Lj6C712G2 Lonicera japonica HOM05D003773 ORTHO05D004377 2.6e-10 70.5 42 76.2
CSS0041311 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 1.7e-09 67.8 33 93.9
Lj6C717T13 Lonicera japonica HOM05D003773 ORTHO05D004377 1.2e-07 61.6 29 86.2
Medtr8g085230 Medicago truncatula HOM05D003773 ORTHO05D004377 1.2e-07 61.6 36 80.6


User provided reference genes

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