Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0439 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.8e-70 268.5 135 100.0
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.0e-35 153.7 83 88.0
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.0e-27 127.1 107 64.5
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 8.4e-14 80.9 97 43.3
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.9e-13 79.7 103 47.6
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.1e-12 76.3 99 48.5
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 2.7e-12 75.9 101 41.6
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 3.5e-12 75.5 89 48.3
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 6.0e-12 74.7 101 45.5
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 7.9e-12 74.3 100 43.0
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 1.8e-11 73.2 116 38.8
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 9.6e-10 67.4 103 45.6
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.1e-09 66.2 106 41.5
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 3.7e-09 65.5 105 42.9
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.8e-09 65.1 109 41.3
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 4.8e-09 65.1 113 38.1
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 6.2e-09 64.7 77 46.8
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 8.2e-09 64.3 100 43.0
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 1.1e-08 63.9 103 37.9
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 2.4e-08 62.8 68 48.5
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 2.4e-08 62.8 65 52.3
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 5.3e-08 61.6 77 42.9
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 6.9e-08 61.2 79 41.8
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 9.0e-08 60.8 72 44.4
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 9.0e-08 60.8 72 43.1
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 9.0e-08 60.8 79 43.0
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.6e-07 59.3 103 39.8
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 2.6e-07 59.3 105 39.0
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.6e-07 59.3 101 42.6
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 3.4e-07 58.9 119 35.3
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 5.8e-07 58.2 111 33.3
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 5.8e-07 58.2 81 40.7
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.0e-06 57.4 78 38.5
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.0e-06 57.4 102 41.2
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.0e-06 57.4 102 41.2
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.0e-06 57.4 78 39.7
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.3e-06 57.0 93 38.7
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.3e-06 57.0 117 37.6
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.7e-06 56.6 112 34.8
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.7e-06 56.6 72 41.7
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.7e-06 56.6 45 60.0
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 2.2e-06 56.2 46 58.7
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.8e-06 55.5 102 40.2
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 4.9e-06 55.1 72 45.8
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 4.9e-06 55.1 102 37.3
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 6.5e-06 54.7 91 34.1
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 6.5e-06 54.7 72 50.0
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 6.5e-06 54.7 72 50.0
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 6.5e-06 54.7 39 64.1
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 8.4e-06 54.3 76 39.5
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 8.4e-06 54.3 106 38.7


User provided reference genes

Program Settings