Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0431 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.2e-58 228.8 119 100.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 6.4e-50 200.7 119 85.7
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 9.0e-44 180.3 119 73.1
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 9.3e-41 170.2 119 71.4
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 4.6e-40 167.9 118 71.2
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 5.1e-39 164.5 119 65.5
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 1.5e-38 162.9 116 67.2
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 1.9e-38 162.5 116 71.6
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 3.3e-38 161.8 116 67.2
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 4.3e-38 161.4 119 67.2
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 9.6e-38 160.2 119 67.2
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 9.6e-38 160.2 118 69.5
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 9.6e-38 160.2 118 69.5
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 9.6e-38 160.2 118 68.6
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 9.6e-38 160.2 119 64.7
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 1.3e-37 159.8 119 67.2
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.3e-37 159.8 118 68.6
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 1.3e-37 159.8 118 68.6
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.6e-37 159.5 118 68.6
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 1.6e-37 159.5 119 67.2
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 2.8e-37 158.7 118 67.8
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 4.8e-37 157.9 116 67.2
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 1.1e-36 156.8 118 61.9
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 1.8e-36 156.0 116 67.2
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 4.0e-36 154.8 116 67.2
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 4.0e-36 154.8 119 62.2
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 6.9e-36 154.1 119 60.5
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 9.0e-36 153.7 116 66.4
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 1.5e-35 152.9 119 63.0
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 2.6e-35 152.1 116 64.7
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 3.4e-35 151.8 118 63.6
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 4.5e-35 151.4 119 63.9
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 5.8e-35 151.0 116 66.4
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 7.6e-35 150.6 116 65.5
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 7.6e-35 150.6 119 60.5
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 7.6e-35 150.6 114 64.0
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 1.0e-34 150.2 119 64.7
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 1.0e-34 150.2 116 64.7
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 1.3e-34 149.8 119 64.7
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 1.3e-34 149.8 116 62.1
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 1.3e-34 149.8 116 61.2
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 2.2e-34 149.1 116 64.7
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 2.9e-34 148.7 116 65.5
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 2.9e-34 148.7 96 78.1
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 2.9e-34 148.7 116 65.5
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 3.8e-34 148.3 116 65.5
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 3.8e-34 148.3 119 61.3
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 4.9e-34 147.9 117 64.1
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 6.5e-34 147.5 116 62.1
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 8.4e-34 147.1 116 64.7
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 1.1e-33 146.7 119 63.0
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 1.4e-33 146.4 113 66.4
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 3.2e-33 145.2 119 62.2
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 4.2e-33 144.8 116 60.3
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 4.2e-33 144.8 113 64.6
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 7.1e-33 144.1 116 60.3
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 1.2e-32 143.3 110 65.5
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 2.7e-32 142.1 116 58.6
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 3.5e-32 141.7 95 75.8
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 3.5e-32 141.7 110 64.5
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 4.6e-32 141.4 119 60.5
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 6.0e-32 141.0 121 58.7
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 6.0e-32 141.0 116 60.3
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 1.3e-31 139.8 116 57.8
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 1.8e-31 139.4 105 62.9
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 3.0e-31 138.7 116 59.5
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 3.9e-31 138.3 119 54.6
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 6.7e-31 137.5 176 45.5
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 8.7e-31 137.1 113 57.5
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 8.7e-31 137.1 149 52.3
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 8.7e-31 137.1 116 57.8
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 1.1e-30 136.7 116 56.9
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 1.1e-30 136.7 116 59.5
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 1.5e-30 136.3 144 52.8
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 3.3e-30 135.2 107 59.8
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 4.3e-30 134.8 116 57.8
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 5.7e-30 134.4 116 57.8
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 9.6e-30 133.7 119 52.1
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 1.3e-29 133.3 119 52.9
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 2.8e-29 132.1 107 57.9
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 2.8e-29 132.1 116 56.0
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 6.2e-29 131.0 94 68.1
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 2.4e-28 129.0 107 57.9
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 4.1e-28 128.3 95 64.2
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 5.3e-28 127.9 116 53.4
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 9.0e-28 127.1 116 53.4
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 2.6e-27 125.6 189 41.8
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 3.4e-27 125.2 116 52.6
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 1.0e-26 123.6 117 53.8
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 1.3e-26 123.2 119 54.6
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 1.3e-26 123.2 117 53.0
Cpa.g.sc25.3 Carica papaya HOM05D002451 ORTHO05D005601 5.0e-26 121.3 96 63.5
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 5.0e-26 121.3 94 64.9
CSS0026050 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 6.5e-26 120.9 101 60.4
CSS0028178 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 6.5e-26 120.9 101 60.4
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 3.9e-23 111.7 71 76.1
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 6.7e-23 110.9 113 46.9
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 2.5e-22 109.0 119 47.1
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 3.1e-20 102.1 116 50.9
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 5.9e-19 97.8 67 71.6
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 4.6e-16 88.2 122 41.8
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 2.5e-14 82.4 55 65.5
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 2.4e-12 75.9 114 32.5
A06p15140 Brassica napus HOM05D002451 ORTHO05D020166 6.9e-12 74.3 57 63.2
BraA06t24629Z Brassica rapa HOM05D002451 ORTHO05D020166 6.9e-12 74.3 57 63.2
Hund28828 Selenicereus undatus HOM05D002451 ORTHO05D005601 2.0e-11 72.8 68 51.5
Hund28869 Selenicereus undatus HOM05D002451 ORTHO05D005601 4.5e-11 71.6 68 51.5
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 1.7e-10 69.7 63 57.1
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 1.0e-07 60.5 122 34.4
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 1.5e-06 56.6 77 41.6


User provided reference genes

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